RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 ECM2O94769 699 aaPredicted RBP18.2■□□□□ 0.5
TRAPPC11-204ENST00000505676 FLT3P36888 993 aa18.2■□□□□ 0.5
TRAPPC11-204ENST00000505676 SCNN1AP37088 669 aa18.2■□□□□ 0.5
TRAPPC11-204ENST00000505676 CYP4A22Q5TCH4 519 aa18.2■□□□□ 0.5
TRAPPC11-204ENST00000505676 MFSD14CQ5VZR4 134 aa18.2■□□□□ 0.5
TRAPPC11-204ENST00000505676 HACE1Q8IYU2 909 aa18.2■□□□□ 0.5
TRAPPC11-204ENST00000505676 CCDC114Q96M63 670 aa18.2■□□□□ 0.5
TRAPPC11-204ENST00000505676 MTG1Q9BT17 334 aaPredicted RBP18.2■□□□□ 0.5
TRAPPC11-204ENST00000505676 CAPS2Q9BXY5 557 aa18.2■□□□□ 0.5
TRAPPC11-204ENST00000505676 SPC25Q9HBM1 224 aa18.2■□□□□ 0.5
TRAPPC11-204ENST00000505676 GDAP2Q9NXN4 497 aa18.2■□□□□ 0.5
TRAPPC11-204ENST00000505676 PIN4Q9Y237 131 aaKnown RBP18.2■□□□□ 0.5
TRAPPC11-204ENST00000505676 GINS2Q9Y248 185 aa18.2■□□□□ 0.5
TRAPPC11-204ENST00000505676 hCG_1818297A0A087WSY0 165 aa18.19■□□□□ 0.5
TRAPPC11-204ENST00000505676 ERBB2P04626 1255 aa18.19■□□□□ 0.5
TRAPPC11-204ENST00000505676 NR1D1P20393 614 aa18.19■□□□□ 0.5
TRAPPC11-204ENST00000505676 RDXP35241 583 aaKnown RBP18.19■□□□□ 0.5
TRAPPC11-204ENST00000505676 RFC1P35251 1148 aaPredicted RBP18.19■□□□□ 0.5
TRAPPC11-204ENST00000505676 KCNJ1P48048 391 aa18.19■□□□□ 0.5
TRAPPC11-204ENST00000505676 GJA9P57773 515 aa18.19■□□□□ 0.5
TRAPPC11-204ENST00000505676 OGDHQ02218 1023 aa18.19■□□□□ 0.5
TRAPPC11-204ENST00000505676 C9orf57Q5W0N0 161 aa18.19■□□□□ 0.5
TRAPPC11-204ENST00000505676 NKD2Q969F2 451 aaPredicted RBP18.19■□□□□ 0.5
TRAPPC11-204ENST00000505676 EIF2AQ9BY44 585 aaKnown RBP18.19■□□□□ 0.5
TRAPPC11-204ENST00000505676 HESX1Q9UBX0 185 aa18.19■□□□□ 0.5
TRAPPC11-204ENST00000505676 HMGXB4Q9UGU5 601 aa18.19■□□□□ 0.5
TRAPPC11-204ENST00000505676 CYTH4Q9UIA0 394 aa18.19■□□□□ 0.5
TRAPPC11-204ENST00000505676 TSPAN16Q9UKR8 245 aa18.19■□□□□ 0.5
TRAPPC11-204ENST00000505676 NEU2Q9Y3R4 380 aa18.19■□□□□ 0.5
TRAPPC11-204ENST00000505676 FGFR4P22455 802 aa18.19■□□□□ 0.5
TRAPPC11-204ENST00000505676 FCGRTP55899 365 aa18.19■□□□□ 0.5
TRAPPC11-204ENST00000505676 SLC25A11Q02978 314 aaKnown RBP18.19■□□□□ 0.5
TRAPPC11-204ENST00000505676 ADCY2Q08462 1091 aa18.19■□□□□ 0.5
TRAPPC11-204ENST00000505676 CCL14Q16627 93 aa18.19■□□□□ 0.5
TRAPPC11-204ENST00000505676 TAZQ16635 292 aa18.19■□□□□ 0.5
TRAPPC11-204ENST00000505676 SV2CQ496J9 727 aa18.19■□□□□ 0.5
TRAPPC11-204ENST00000505676 DPH6Q7L8W6 267 aa18.19■□□□□ 0.5
TRAPPC11-204ENST00000505676 VSIG1Q86XK7 387 aa18.19■□□□□ 0.5
TRAPPC11-204ENST00000505676 HHIPL1Q96JK4 782 aa18.19■□□□□ 0.5
TRAPPC11-204ENST00000505676 CNPY3Q9BT09 278 aa18.19■□□□□ 0.5
TRAPPC11-204ENST00000505676 UPF3AQ9H1J1 476 aaKnown RBP18.19■□□□□ 0.5
TRAPPC11-204ENST00000505676 NMRK2Q9NPI5 230 aa18.19■□□□□ 0.5
TRAPPC11-204ENST00000505676 GOLGA8SH3BPF8 625 aa18.18■□□□□ 0.5
TRAPPC11-204ENST00000505676 TREHO43280 583 aa18.18■□□□□ 0.5
TRAPPC11-204ENST00000505676 LIASO43766 372 aa18.18■□□□□ 0.5
TRAPPC11-204ENST00000505676 ALDH1A1P00352 501 aa18.18■□□□□ 0.5
TRAPPC11-204ENST00000505676 CDKN2BP42772 138 aa18.18■□□□□ 0.5
TRAPPC11-204ENST00000505676 TM4SF4P48230 202 aa18.18■□□□□ 0.5
TRAPPC11-204ENST00000505676 ZNF143P52747 638 aaPredicted RBP18.18■□□□□ 0.5
TRAPPC11-204ENST00000505676 FBXO47Q5MNV8 452 aa18.18■□□□□ 0.5
TRAPPC11-204ENST00000505676 RHBDF2Q6PJF5 856 aa18.18■□□□□ 0.5
TRAPPC11-204ENST00000505676 RELL1Q8IUW5 271 aa18.18■□□□□ 0.5
TRAPPC11-204ENST00000505676 RNF25Q96BH1 459 aaPredicted RBP18.18■□□□□ 0.5
TRAPPC11-204ENST00000505676 ROPN1BQ9BZX4 212 aaPredicted RBP18.18■□□□□ 0.5
TRAPPC11-204ENST00000505676 ROPN1Q9HAT0 212 aaPredicted RBP18.18■□□□□ 0.5
TRAPPC11-204ENST00000505676 METTL5Q9NRN9 209 aaKnown RBP18.18■□□□□ 0.5
TRAPPC11-204ENST00000505676 SNX9Q9Y5X1 595 aa18.18■□□□□ 0.5
TRAPPC11-204ENST00000505676 TLL2Q9Y6L7 1015 aa18.18■□□□□ 0.5
TRAPPC11-204ENST00000505676 PIRO00625 290 aa18.18■□□□□ 0.5
TRAPPC11-204ENST00000505676 DPYSL4O14531 572 aa18.18■□□□□ 0.5
TRAPPC11-204ENST00000505676 CA12O43570 354 aa18.18■□□□□ 0.5
TRAPPC11-204ENST00000505676 LRCH4O75427 683 aa18.18■□□□□ 0.5
TRAPPC11-204ENST00000505676 GJB6O95452 261 aa18.18■□□□□ 0.5
TRAPPC11-204ENST00000505676 GJC1P36383 396 aa18.18■□□□□ 0.5
TRAPPC11-204ENST00000505676 TMEM62Q0P6H9 643 aa18.18■□□□□ 0.5
TRAPPC11-204ENST00000505676 BYSLQ13895 437 aaKnown RBP18.18■□□□□ 0.5
TRAPPC11-204ENST00000505676 MFSD7Q6UXD7 560 aa18.18■□□□□ 0.5
TRAPPC11-204ENST00000505676 ARCQ7LC44 396 aa18.18■□□□□ 0.5
TRAPPC11-204ENST00000505676 RPAINQ86UA6 219 aa18.18■□□□□ 0.5
TRAPPC11-204ENST00000505676 SESTD1Q86VW0 696 aa18.18■□□□□ 0.5
TRAPPC11-204ENST00000505676 PGM2Q96G03 612 aa18.18■□□□□ 0.5
TRAPPC11-204ENST00000505676 ZMAT2Q96NC0 199 aaKnown RBP18.18■□□□□ 0.5
TRAPPC11-204ENST00000505676 HEMGNQ9BXL5 484 aa18.18■□□□□ 0.5
TRAPPC11-204ENST00000505676 CDHR5Q9HBB8 845 aa18.18■□□□□ 0.5
TRAPPC11-204ENST00000505676 CHST12Q9NRB3 414 aa18.18■□□□□ 0.5
TRAPPC11-204ENST00000505676 CALCOCO1Q9P1Z2 691 aa18.18■□□□□ 0.5
TRAPPC11-204ENST00000505676 LRRD1A4D1F6 860 aa18.17■□□□□ 0.5
TRAPPC11-204ENST00000505676 ITGAVP06756 1048 aa18.17■□□□□ 0.5
TRAPPC11-204ENST00000505676 GPD1P21695 349 aa18.17■□□□□ 0.5
TRAPPC11-204ENST00000505676 SNX1Q13596 522 aa18.17■□□□□ 0.5
TRAPPC11-204ENST00000505676 KRT71Q3SY84 523 aa18.17■□□□□ 0.5
TRAPPC11-204ENST00000505676 PKDCCQ504Y2 493 aa18.17■□□□□ 0.5
TRAPPC11-204ENST00000505676 HERPUD2Q9BSE4 406 aa18.17■□□□□ 0.5
TRAPPC11-204ENST00000505676 SLC4A5Q9BY07 1137 aa18.17■□□□□ 0.5
TRAPPC11-204ENST00000505676 NXF3Q9H4D5 531 aaKnown RBP18.17■□□□□ 0.5
TRAPPC11-204ENST00000505676 IVDP26440 423 aa18.17■□□□□ 0.5
TRAPPC11-204ENST00000505676 ADCY8P40145 1251 aa18.17■□□□□ 0.5
TRAPPC11-204ENST00000505676 TAF6P49848 677 aa18.17■□□□□ 0.5
TRAPPC11-204ENST00000505676 GOLGA7BQ2TAP0 167 aa18.17■□□□□ 0.5
TRAPPC11-204ENST00000505676 C6orf118Q5T5N4 469 aa18.17■□□□□ 0.5
TRAPPC11-204ENST00000505676 FAM102AQ5T9C2 384 aaPredicted RBP18.17■□□□□ 0.5
TRAPPC11-204ENST00000505676 BBS12Q6ZW61 710 aa18.17■□□□□ 0.5
TRAPPC11-204ENST00000505676 CRYBG2Q8N1P7 616 aa18.17■□□□□ 0.5
TRAPPC11-204ENST00000505676 ATG4AQ8WYN0 398 aa18.17■□□□□ 0.5
TRAPPC11-204ENST00000505676 CNOT10Q9H9A5 744 aaKnown RBP18.17■□□□□ 0.5
TRAPPC11-204ENST00000505676 SLC38A7Q9NVC3 462 aa18.17■□□□□ 0.5
TRAPPC11-204ENST00000505676 ANAPC5Q9UJX4 755 aa18.17■□□□□ 0.5
TRAPPC11-204ENST00000505676 R3HDM2Q9Y2K5 976 aaKnown RBP18.17■□□□□ 0.5
TRAPPC11-204ENST00000505676 PDCD11Q14690 1871 aaKnown RBP18.16■□□□□ 0.5
TRAPPC11-204ENST00000505676 SMIM28A0A1B0GU29 152 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms