RNA–Protein interactions for RNA: ENST00000505496.6

CTSB-205, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-205ENST00000505496 LMO3Q8TAP4 145 aa9.29□□□□□ -0.92
CTSB-205ENST00000505496 SHKBP1Q8TBC3 707 aa9.29□□□□□ -0.92
CTSB-205ENST00000505496 WHAMMQ8TF30 809 aa9.29□□□□□ -0.92
CTSB-205ENST00000505496 EDAQ92838 391 aa9.29□□□□□ -0.92
CTSB-205ENST00000505496 MYLPFQ96A32 169 aa9.29□□□□□ -0.92
CTSB-205ENST00000505496 TRMT2BQ96GJ1 504 aaKnown RBP9.29□□□□□ -0.92
CTSB-205ENST00000505496 TNIP3Q96KP6 325 aa9.29□□□□□ -0.92
CTSB-205ENST00000505496 SPATA17Q96L03 361 aa9.29□□□□□ -0.92
CTSB-205ENST00000505496 MYRFLQ96LU7 910 aa9.29□□□□□ -0.92
CTSB-205ENST00000505496 LPIN3Q9BQK8 851 aa9.29□□□□□ -0.92
CTSB-205ENST00000505496 EPHX3Q9H6B9 360 aa9.29□□□□□ -0.92
CTSB-205ENST00000505496 TRPV4Q9HBA0 871 aa9.29□□□□□ -0.92
CTSB-205ENST00000505496 IL21Q9HBE4 155 aa9.29□□□□□ -0.92
CTSB-205ENST00000505496 ZNF334Q9HCZ1 680 aaPredicted RBP9.29□□□□□ -0.92
CTSB-205ENST00000505496 C11orf16Q9NQ32 467 aa9.29□□□□□ -0.92
CTSB-205ENST00000505496 MAGEC2Q9UBF1 373 aaPredicted RBP9.29□□□□□ -0.92
CTSB-205ENST00000505496 SORCS3Q9UPU3 1222 aa9.29□□□□□ -0.92
CTSB-205ENST00000505496 MRPS23Q9Y3D9 190 aaKnown RBP9.29□□□□□ -0.92
CTSB-205ENST00000505496 NOTCH4Q99466 2003 aa9.29□□□□□ -0.92
CTSB-205ENST00000505496 SOBPA7XYQ1 873 aa9.28□□□□□ -0.92
CTSB-205ENST00000505496 GPR37L1O60883 481 aa9.28□□□□□ -0.92
CTSB-205ENST00000505496 ASGR2P07307 311 aa9.28□□□□□ -0.92
CTSB-205ENST00000505496 CSH1P0DML2 217 aa9.28□□□□□ -0.92
CTSB-205ENST00000505496 CSH2P0DML3 217 aa9.28□□□□□ -0.92
CTSB-205ENST00000505496 CCDC192P0DO97 292 aa9.28□□□□□ -0.92
CTSB-205ENST00000505496 BDNFP23560 247 aa9.28□□□□□ -0.92
CTSB-205ENST00000505496 GPR15P49685 360 aa9.28□□□□□ -0.92
CTSB-205ENST00000505496 CDR1P51861 262 aa9.28□□□□□ -0.92
CTSB-205ENST00000505496 NDST1P52848 882 aa9.28□□□□□ -0.92
CTSB-205ENST00000505496 KCNH2Q12809 1159 aa9.28□□□□□ -0.92
CTSB-205ENST00000505496 TDGQ13569 410 aa9.28□□□□□ -0.92
CTSB-205ENST00000505496 MTMR3Q13615 1198 aa9.28□□□□□ -0.92
CTSB-205ENST00000505496 VEPH1Q14D04 833 aa9.28□□□□□ -0.92
CTSB-205ENST00000505496 DDR2Q16832 855 aa9.28□□□□□ -0.92
CTSB-205ENST00000505496 MDH1BQ5I0G3 518 aa9.28□□□□□ -0.92
CTSB-205ENST00000505496 WDR44Q5JSH3 913 aa9.28□□□□□ -0.92
CTSB-205ENST00000505496 CCDC183Q5T5S1 534 aa9.28□□□□□ -0.92
CTSB-205ENST00000505496 PARM1Q6UWI2 310 aa9.28□□□□□ -0.92
CTSB-205ENST00000505496 PAQR9Q6ZVX9 377 aa9.28□□□□□ -0.92
CTSB-205ENST00000505496 MTSS1LQ765P7 747 aa9.28□□□□□ -0.92
CTSB-205ENST00000505496 TMEM150AQ86TG1 271 aa9.28□□□□□ -0.92
CTSB-205ENST00000505496 UBR7Q8N806 425 aa9.28□□□□□ -0.92
CTSB-205ENST00000505496 CCDC150Q8NCX0 1101 aa9.28□□□□□ -0.92
CTSB-205ENST00000505496 TATDN2Q93075 761 aa9.28□□□□□ -0.92
CTSB-205ENST00000505496 C8orf48Q96LL4 319 aa9.28□□□□□ -0.92
CTSB-205ENST00000505496 TWNKQ96RR1 684 aa9.28□□□□□ -0.92
CTSB-205ENST00000505496 C1QTNF1Q9BXJ1 281 aa9.28□□□□□ -0.92
CTSB-205ENST00000505496 B3GNT5Q9BYG0 378 aa9.28□□□□□ -0.92
CTSB-205ENST00000505496 GPR88Q9GZN0 384 aa9.28□□□□□ -0.92
CTSB-205ENST00000505496 ELOVL4Q9GZR5 314 aa9.28□□□□□ -0.92
CTSB-205ENST00000505496 THAP9Q9H5L6 903 aa9.28□□□□□ -0.92
CTSB-205ENST00000505496 MMRN2Q9H8L6 949 aa9.28□□□□□ -0.92
CTSB-205ENST00000505496 TMEM30AQ9NV96 361 aa9.28□□□□□ -0.92
CTSB-205ENST00000505496 HMGXB4Q9UGU5 601 aa9.28□□□□□ -0.92
CTSB-205ENST00000505496 DACH1Q9UI36 760 aa9.28□□□□□ -0.92
CTSB-205ENST00000505496 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.28□□□□□ -0.92
CTSB-205ENST00000505496 DOCK8Q8NF50 2099 aa9.27□□□□□ -0.93
CTSB-205ENST00000505496 TRIM66O15016 1216 aa9.27□□□□□ -0.93
CTSB-205ENST00000505496 ECI2O75521 394 aa9.27□□□□□ -0.93
CTSB-205ENST00000505496 AFPP02771 609 aaKnown RBP9.27□□□□□ -0.93
CTSB-205ENST00000505496 F11P03951 625 aa9.27□□□□□ -0.93
CTSB-205ENST00000505496 FCARP24071 287 aa9.27□□□□□ -0.93
CTSB-205ENST00000505496 CDC25CP30307 473 aa9.27□□□□□ -0.93
CTSB-205ENST00000505496 CACNA2D1P54289 1103 aa9.27□□□□□ -0.93
CTSB-205ENST00000505496 CYP27A1Q02318 531 aa9.27□□□□□ -0.93
CTSB-205ENST00000505496 SIGLEC14Q08ET2 396 aa9.27□□□□□ -0.93
CTSB-205ENST00000505496 CETN1Q12798 172 aa9.27□□□□□ -0.93
CTSB-205ENST00000505496 CUL2Q13617 745 aa9.27□□□□□ -0.93
CTSB-205ENST00000505496 SMYD5Q6GMV2 418 aa9.27□□□□□ -0.93
CTSB-205ENST00000505496 ACOT1Q86TX2 421 aa9.27□□□□□ -0.93
CTSB-205ENST00000505496 FUKQ8N0W3 1084 aa9.27□□□□□ -0.93
CTSB-205ENST00000505496 SLC44A3Q8N4M1 653 aa9.27□□□□□ -0.93
CTSB-205ENST00000505496 ENOX1Q8TC92 643 aaKnown RBP9.27□□□□□ -0.93
CTSB-205ENST00000505496 GPR152Q8TDT2 470 aa9.27□□□□□ -0.93
CTSB-205ENST00000505496 GIPC2Q8TF65 315 aa9.27□□□□□ -0.93
CTSB-205ENST00000505496 ING5Q8WYH8 240 aa9.27□□□□□ -0.93
CTSB-205ENST00000505496 FGF14Q92915 247 aa9.27□□□□□ -0.93
CTSB-205ENST00000505496 ASIC4Q96FT7 647 aa9.27□□□□□ -0.93
CTSB-205ENST00000505496 CNOT6LQ96LI5 555 aaKnown RBP9.27□□□□□ -0.93
CTSB-205ENST00000505496 ZSWIM3Q96MP5 696 aa9.27□□□□□ -0.93
CTSB-205ENST00000505496 ASB16Q96NS5 453 aa9.27□□□□□ -0.93
CTSB-205ENST00000505496 HNRNPABQ99729 332 aaKnown RBP9.27□□□□□ -0.93
CTSB-205ENST00000505496 ARID3AQ99856 593 aa9.27□□□□□ -0.93
CTSB-205ENST00000505496 TTLL2Q9BWV7 592 aa9.27□□□□□ -0.93
CTSB-205ENST00000505496 NT5C1AQ9BXI3 368 aa9.27□□□□□ -0.93
CTSB-205ENST00000505496 ZNF518BQ9C0D4 1074 aa9.27□□□□□ -0.93
CTSB-205ENST00000505496 CSNK1G1Q9HCP0 422 aa9.27□□□□□ -0.93
CTSB-205ENST00000505496 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.27□□□□□ -0.931e-8■■■■■ 38.5
CTSB-205ENST00000505496 CISHQ9NSE2 258 aa9.27□□□□□ -0.93
CTSB-205ENST00000505496 IL37Q9NZH6 218 aa9.27□□□□□ -0.93
CTSB-205ENST00000505496 TMEM63CQ9P1W3 806 aa9.27□□□□□ -0.93
CTSB-205ENST00000505496 ZMYM5Q9UJ78 669 aa9.27□□□□□ -0.93
CTSB-205ENST00000505496 DUSP12Q9UNI6 340 aa9.27□□□□□ -0.93
CTSB-205ENST00000505496 NUMBLQ9Y6R0 609 aa9.27□□□□□ -0.93
CTSB-205ENST00000505496 DOCK6Q96HP0 2047 aa9.27□□□□□ -0.93
CTSB-205ENST00000505496 A0A1W2PRU2 124 aa9.26□□□□□ -0.93
CTSB-205ENST00000505496 GTPBP10A4D1E9 387 aaKnown RBP9.26□□□□□ -0.93
CTSB-205ENST00000505496 SLC38A8A6NNN8 435 aa9.26□□□□□ -0.93
CTSB-205ENST00000505496 F8VP50 259 aa9.26□□□□□ -0.93
CTSB-205ENST00000505496 CLDN5O00501 218 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms