RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 TMLHEQ9NVH6 421 aa12.69□□□□□ -0.38
PDLIM5-208ENST00000504489 ZDHHC7Q9NXF8 308 aa12.69□□□□□ -0.38
PDLIM5-208ENST00000504489 APEX2Q9UBZ4 518 aa12.69□□□□□ -0.38
PDLIM5-208ENST00000504489 PCDHB5Q9Y5E4 795 aa12.69□□□□□ -0.38
PDLIM5-208ENST00000504489 C5orf42Q9H799 3197 aa12.68□□□□□ -0.38
PDLIM5-208ENST00000504489 PRRG1O14668 218 aa12.68□□□□□ -0.38
PDLIM5-208ENST00000504489 SEC24AO95486 1093 aa12.68□□□□□ -0.38
PDLIM5-208ENST00000504489 C8AP07357 584 aa12.68□□□□□ -0.38
PDLIM5-208ENST00000504489 POU2F2P09086 479 aa12.68□□□□□ -0.38
PDLIM5-208ENST00000504489 HNRNPA1P09651 372 aaKnown RBP eCLIP12.68□□□□□ -0.38
PDLIM5-208ENST00000504489 CD58P19256 250 aa12.68□□□□□ -0.38
PDLIM5-208ENST00000504489 TRIM21P19474 475 aaKnown RBP12.68□□□□□ -0.38
PDLIM5-208ENST00000504489 KCNA5P22460 613 aa12.68□□□□□ -0.38
PDLIM5-208ENST00000504489 PSMC1P62191 440 aaKnown RBP12.68□□□□□ -0.38
PDLIM5-208ENST00000504489 ITIH3Q06033 890 aa12.68□□□□□ -0.38
PDLIM5-208ENST00000504489 DUSP4Q13115 394 aa12.68□□□□□ -0.38
PDLIM5-208ENST00000504489 FILIP1LQ4L180 1135 aa12.68□□□□□ -0.38
PDLIM5-208ENST00000504489 PPM1LQ5SGD2 360 aa12.68□□□□□ -0.38
PDLIM5-208ENST00000504489 C4orf50Q6ZRC1 276 aa12.68□□□□□ -0.38
PDLIM5-208ENST00000504489 RRAGAQ7L523 313 aa12.68□□□□□ -0.38
PDLIM5-208ENST00000504489 ATAD1Q8NBU5 361 aa12.68□□□□□ -0.38
PDLIM5-208ENST00000504489 SLC7A14Q8TBB6 771 aa12.68□□□□□ -0.38
PDLIM5-208ENST00000504489 FUBP3Q96I24 572 aaKnown RBP eCLIP12.68□□□□□ -0.38
PDLIM5-208ENST00000504489 KREMEN1Q96MU8 473 aa12.68□□□□□ -0.38
PDLIM5-208ENST00000504489 ERGIC2Q96RQ1 377 aa12.68□□□□□ -0.38
PDLIM5-208ENST00000504489 S1PR5Q9H228 398 aa12.68□□□□□ -0.38
PDLIM5-208ENST00000504489 CRISPLD1Q9H336 500 aa12.68□□□□□ -0.38
PDLIM5-208ENST00000504489 DPEP3Q9H4B8 488 aa12.68□□□□□ -0.38
PDLIM5-208ENST00000504489 CYP4F11Q9HBI6 524 aa12.68□□□□□ -0.38
PDLIM5-208ENST00000504489 SIX2Q9NPC8 291 aa12.68□□□□□ -0.38
PDLIM5-208ENST00000504489 UBE2TQ9NPD8 197 aaPredicted RBP12.68□□□□□ -0.38
PDLIM5-208ENST00000504489 PLCB1Q9NQ66 1216 aa12.68□□□□□ -0.38
PDLIM5-208ENST00000504489 RTN4Q9NQC3 1192 aaKnown RBP12.68□□□□□ -0.38
PDLIM5-208ENST00000504489 HMGXB4Q9UGU5 601 aa12.68□□□□□ -0.38
PDLIM5-208ENST00000504489 CD207Q9UJ71 328 aa12.68□□□□□ -0.38
PDLIM5-208ENST00000504489 A0A1B0GTH6 734 aa12.67□□□□□ -0.38
PDLIM5-208ENST00000504489 CCDC195A0A1B0GUA6 201 aa12.67□□□□□ -0.38
PDLIM5-208ENST00000504489 RFPL2O75678 378 aa12.67□□□□□ -0.38
PDLIM5-208ENST00000504489 NUDT7P0C024 238 aa12.67□□□□□ -0.38
PDLIM5-208ENST00000504489 HAPLN1P10915 354 aaPredicted RBP12.67□□□□□ -0.38
PDLIM5-208ENST00000504489 ACO1P21399 889 aaKnown RBP12.67□□□□□ -0.38
PDLIM5-208ENST00000504489 MAGEA11P43364 429 aa12.67□□□□□ -0.38
PDLIM5-208ENST00000504489 TUFMP49411 452 aaKnown RBP12.67□□□□□ -0.38
PDLIM5-208ENST00000504489 RAD23BP54727 409 aa12.67□□□□□ -0.38
PDLIM5-208ENST00000504489 MFAP3P55082 362 aa12.67□□□□□ -0.38
PDLIM5-208ENST00000504489 UBXN1Q04323 297 aa12.67□□□□□ -0.38
PDLIM5-208ENST00000504489 DSG2Q14126 1118 aa12.67□□□□□ -0.38
PDLIM5-208ENST00000504489 LEXMQ3ZCV2 418 aa12.67□□□□□ -0.38
PDLIM5-208ENST00000504489 CFAP221Q4G0U5 840 aa12.67□□□□□ -0.38
PDLIM5-208ENST00000504489 MDH1BQ5I0G3 518 aa12.67□□□□□ -0.38
PDLIM5-208ENST00000504489 ACOT1Q86TX2 421 aa12.67□□□□□ -0.38
PDLIM5-208ENST00000504489 SPATA2LQ8IUW3 424 aaPredicted RBP12.67□□□□□ -0.38
PDLIM5-208ENST00000504489 SPNS2Q8IVW8 549 aa12.67□□□□□ -0.38
PDLIM5-208ENST00000504489 C12orf76Q8N812 135 aaPredicted RBP12.67□□□□□ -0.38
PDLIM5-208ENST00000504489 SMRP1Q8NCR6 262 aa12.67□□□□□ -0.38
PDLIM5-208ENST00000504489 KAT5Q92993 513 aa12.67□□□□□ -0.38
PDLIM5-208ENST00000504489 PCED1BQ96HM7 432 aa12.67□□□□□ -0.38
PDLIM5-208ENST00000504489 TWNKQ96RR1 684 aa12.67□□□□□ -0.38
PDLIM5-208ENST00000504489 PRKD2Q9BZL6 878 aa12.67□□□□□ -0.38
PDLIM5-208ENST00000504489 ELOVL4Q9GZR5 314 aa12.67□□□□□ -0.38
PDLIM5-208ENST00000504489 ADAM7Q9H2U9 754 aa12.67□□□□□ -0.38
PDLIM5-208ENST00000504489 PRDM6Q9NQX0 595 aa12.67□□□□□ -0.38
PDLIM5-208ENST00000504489 ABI2Q9NYB9 513 aaPredicted RBP12.67□□□□□ -0.38
PDLIM5-208ENST00000504489 CNTN6Q9UQ52 1028 aa12.67□□□□□ -0.38
PDLIM5-208ENST00000504489 SIK3Q9Y2K2 1263 aa12.67□□□□□ -0.38
PDLIM5-208ENST00000504489 INSL5Q9Y5Q6 135 aa12.67□□□□□ -0.38
PDLIM5-208ENST00000504489 NUP210Q8TEM1 1887 aaPredicted RBP12.67□□□□□ -0.38
PDLIM5-208ENST00000504489 HELZP42694 1942 aaKnown RBP12.66□□□□□ -0.38
PDLIM5-208ENST00000504489 H3BQ06 376 aaPredicted RBP12.66□□□□□ -0.38
PDLIM5-208ENST00000504489 SERPINC1P01008 464 aa12.66□□□□□ -0.38
PDLIM5-208ENST00000504489 RFX1P22670 979 aa12.66□□□□□ -0.38
PDLIM5-208ENST00000504489 ALDH1A3P47895 512 aa12.66□□□□□ -0.38
PDLIM5-208ENST00000504489 FANCCQ00597 558 aa12.66□□□□□ -0.38
PDLIM5-208ENST00000504489 PLD1Q13393 1074 aa12.66□□□□□ -0.38
PDLIM5-208ENST00000504489 SMAD4Q13485 552 aaKnown RBP12.66□□□□□ -0.38
PDLIM5-208ENST00000504489 CCDC142Q17RM4 750 aa12.66□□□□□ -0.38
PDLIM5-208ENST00000504489 PUS10Q3MIT2 529 aaKnown RBP12.66□□□□□ -0.38
PDLIM5-208ENST00000504489 RARS2Q5T160 578 aaKnown RBP12.66□□□□□ -0.38
PDLIM5-208ENST00000504489 KLHDC7AQ5VTJ3 777 aa12.66□□□□□ -0.38
PDLIM5-208ENST00000504489 CES5AQ6NT32 575 aa12.66□□□□□ -0.38
PDLIM5-208ENST00000504489 GJB7Q6PEY0 223 aa12.66□□□□□ -0.38
PDLIM5-208ENST00000504489 TMC5Q6UXY8 1006 aa12.66□□□□□ -0.38
PDLIM5-208ENST00000504489 GPR149Q86SP6 731 aa12.66□□□□□ -0.38
PDLIM5-208ENST00000504489 TTC9BQ8N6N2 239 aa12.66□□□□□ -0.38
PDLIM5-208ENST00000504489 SLC4A11Q8NBS3 891 aa12.66□□□□□ -0.38
PDLIM5-208ENST00000504489 MYLPFQ96A32 169 aa12.66□□□□□ -0.38
PDLIM5-208ENST00000504489 ZNF707Q96C28 371 aaPredicted RBP12.66□□□□□ -0.38
PDLIM5-208ENST00000504489 TMEM176AQ96HP8 235 aa12.66□□□□□ -0.38
PDLIM5-208ENST00000504489 NAP1L5Q96NT1 182 aaPredicted RBP12.66□□□□□ -0.38
PDLIM5-208ENST00000504489 LPIN3Q9BQK8 851 aa12.66□□□□□ -0.38
PDLIM5-208ENST00000504489 LSM14BQ9BX40 385 aaKnown RBP12.66□□□□□ -0.38
PDLIM5-208ENST00000504489 B3GNT5Q9BYG0 378 aa12.66□□□□□ -0.38
PDLIM5-208ENST00000504489 THEGQ9P2T0 379 aa12.66□□□□□ -0.38
PDLIM5-208ENST00000504489 DNAJC12Q9UKB3 198 aa12.66□□□□□ -0.38
PDLIM5-208ENST00000504489 SLC27A5Q9Y2P5 690 aa12.66□□□□□ -0.38
PDLIM5-208ENST00000504489 DAAM1Q9Y4D1 1078 aa12.66□□□□□ -0.38
PDLIM5-208ENST00000504489 YIPF1Q9Y548 306 aa12.66□□□□□ -0.38
PDLIM5-208ENST00000504489 PCDHB4Q9Y5E5 795 aa12.66□□□□□ -0.38
PDLIM5-208ENST00000504489 ATP8B3O60423 1300 aa12.65□□□□□ -0.38
PDLIM5-208ENST00000504489 TEX33O43247 280 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms