RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810	MTMR11	A4FU01	709 aa		11.45	□□□□□ -0.58
CDK11A-222	ENST00000498810	ESPN	B1AK53	854 aa		11.45	□□□□□ -0.58
CDK11A-222	ENST00000498810	CALU	O43852	315 aa	Predicted RBP	11.45	□□□□□ -0.58
CDK11A-222	ENST00000498810	SEC24A	O95486	1093 aa		11.45	□□□□□ -0.58
CDK11A-222	ENST00000498810	CYP11A1	P05108	521 aa		11.45	□□□□□ -0.58
CDK11A-222	ENST00000498810	TNNC1	P63316	161 aa		11.45	□□□□□ -0.58
CDK11A-222	ENST00000498810	DUSP4	Q13115	394 aa		11.45	□□□□□ -0.58
CDK11A-222	ENST00000498810	GPR17	Q13304	367 aa		11.45	□□□□□ -0.58
CDK11A-222	ENST00000498810	BIRC3	Q13489	604 aa		11.45	□□□□□ -0.58
CDK11A-222	ENST00000498810	CEP135	Q66GS9	1140 aa		11.45	□□□□□ -0.58
CDK11A-222	ENST00000498810	KRBA2	Q6ZNG9	492 aa		11.45	□□□□□ -0.58
CDK11A-222	ENST00000498810	ITIH5	Q86UX2	942 aa		11.45	□□□□□ -0.58
CDK11A-222	ENST00000498810	ADGRF2	Q8IZF7	708 aa		11.45	□□□□□ -0.58
CDK11A-222	ENST00000498810	SIX5	Q8N196	739 aa		11.45	□□□□□ -0.58
CDK11A-222	ENST00000498810	TMEM86A	Q8N2M4	240 aa		11.45	□□□□□ -0.58
CDK11A-222	ENST00000498810	ST13P5	Q8NFI4	369 aa	Predicted RBP	11.45	□□□□□ -0.58
CDK11A-222	ENST00000498810	ITFG1	Q8TB96	612 aa		11.45	□□□□□ -0.58
CDK11A-222	ENST00000498810	IRF7	Q92985	503 aa		11.45	□□□□□ -0.58
CDK11A-222	ENST00000498810	MCRS1	Q96EZ8	462 aa		11.45	□□□□□ -0.58
CDK11A-222	ENST00000498810	MMS19	Q96T76	1030 aa		11.45	□□□□□ -0.58
CDK11A-222	ENST00000498810	CGRRF1	Q99675	332 aa		11.45	□□□□□ -0.58
CDK11A-222	ENST00000498810	KXD1	Q9BQD3	176 aa		11.45	□□□□□ -0.58
CDK11A-222	ENST00000498810	INTS13	Q9NVM9	706 aa		11.45	□□□□□ -0.58
CDK11A-222	ENST00000498810	CA14	Q9ULX7	337 aa		11.45	□□□□□ -0.58
CDK11A-222	ENST00000498810	HPSE	Q9Y251	543 aa		11.45	□□□□□ -0.58
CDK11A-222	ENST00000498810	FRMD4B	Q9Y2L6	1034 aa		11.45	□□□□□ -0.58
CDK11A-222	ENST00000498810	NARS	O43776	548 aa	Known RBP	11.44	□□□□□ -0.58
CDK11A-222	ENST00000498810	TBC1D4	O60343	1298 aa		11.44	□□□□□ -0.58
CDK11A-222	ENST00000498810	ZNF202	O95125	648 aa		11.44	□□□□□ -0.58
CDK11A-222	ENST00000498810	SRF	P11831	508 aa		11.44	□□□□□ -0.58
CDK11A-222	ENST00000498810	CEBPB	P17676	345 aa		11.44	□□□□□ -0.58
CDK11A-222	ENST00000498810	PCSK1	P29120	753 aa		11.44	□□□□□ -0.58
CDK11A-222	ENST00000498810	ANP32A	P39687	249 aa	Known RBP	11.44	□□□□□ -0.58
CDK11A-222	ENST00000498810	CDR1	P51861	262 aa		11.44	□□□□□ -0.58
CDK11A-222	ENST00000498810	CYP24A1	Q07973	514 aa		11.44	□□□□□ -0.58
CDK11A-222	ENST00000498810	EHHADH	Q08426	723 aa		11.44	□□□□□ -0.58
CDK11A-222	ENST00000498810	SMARCB1	Q12824	385 aa		11.44	□□□□□ -0.58
CDK11A-222	ENST00000498810	HTR4	Q13639	388 aa		11.44	□□□□□ -0.58
CDK11A-222	ENST00000498810	BMT2	Q1RMZ1	405 aa		11.44	□□□□□ -0.58
CDK11A-222	ENST00000498810	ARHGAP15	Q53QZ3	475 aa		11.44	□□□□□ -0.58
CDK11A-222	ENST00000498810	BMP8A	Q7Z5Y6	402 aa		11.44	□□□□□ -0.58
CDK11A-222	ENST00000498810	ATAD1	Q8NBU5	361 aa		11.44	□□□□□ -0.58
CDK11A-222	ENST00000498810	OR10T2	Q8NGX3	314 aa		11.44	□□□□□ -0.58
CDK11A-222	ENST00000498810	SPPL2B	Q8TCT7	592 aa		11.44	□□□□□ -0.58
CDK11A-222	ENST00000498810	C2orf15	Q8WU43	125 aa	Known RBP	11.44	□□□□□ -0.58
CDK11A-222	ENST00000498810	HPDL	Q96IR7	371 aa		11.44	□□□□□ -0.58
CDK11A-222	ENST00000498810	FAM84A	Q96KN4	292 aa		11.44	□□□□□ -0.58
CDK11A-222	ENST00000498810	TMEM209	Q96SK2	561 aa		11.44	□□□□□ -0.58
CDK11A-222	ENST00000498810	PRRX2	Q99811	253 aa		11.44	□□□□□ -0.58
CDK11A-222	ENST00000498810	GOLPH3L	Q9H4A5	285 aa		11.44	□□□□□ -0.58
CDK11A-222	ENST00000498810	RMND1	Q9NWS8	449 aa		11.44	□□□□□ -0.58
CDK11A-222	ENST00000498810	DDX43	Q9NXZ2	648 aa	Known RBP	11.44	□□□□□ -0.58
CDK11A-222	ENST00000498810	DNMT3L	Q9UJW3	386 aa		11.44	□□□□□ -0.58
CDK11A-222	ENST00000498810	PCDHB5	Q9Y5E4	795 aa		11.44	□□□□□ -0.58
CDK11A-222	ENST00000498810	TICRR	Q7Z2Z1	1910 aa		11.44	□□□□□ -0.58
CDK11A-222	ENST00000498810	OBSL1	O75147	1896 aa		11.44	□□□□□ -0.58
CDK11A-222	ENST00000498810	SPINT1	O43278	529 aa		11.43	□□□□□ -0.58
CDK11A-222	ENST00000498810	TGFB1I1	O43294	461 aa		11.43	□□□□□ -0.58
CDK11A-222	ENST00000498810	KLRC4	O43908	158 aa		11.43	□□□□□ -0.58
CDK11A-222	ENST00000498810	SOAT2	O75908	522 aa		11.43	□□□□□ -0.58
CDK11A-222	ENST00000498810	PAPLN	O95428	1278 aa		11.43	□□□□□ -0.58
CDK11A-222	ENST00000498810	FGF19	O95750	216 aa		11.43	□□□□□ -0.58
CDK11A-222	ENST00000498810	ACAT1	P24752	427 aa	Known RBP	11.43	□□□□□ -0.58
CDK11A-222	ENST00000498810	HOXD13	P35453	343 aa		11.43	□□□□□ -0.58
CDK11A-222	ENST00000498810	LHX1	P48742	406 aa		11.43	□□□□□ -0.58
CDK11A-222	ENST00000498810	TUFM	P49411	452 aa	Known RBP	11.43	□□□□□ -0.58
CDK11A-222	ENST00000498810	INSM1	Q01101	510 aa	Predicted RBP	11.43	□□□□□ -0.58
CDK11A-222	ENST00000498810	STK4	Q13043	487 aa		11.43	□□□□□ -0.58
CDK11A-222	ENST00000498810	PSMD6	Q15008	389 aa		11.43	□□□□□ -0.58
CDK11A-222	ENST00000498810	NFE2	Q16621	373 aa	Predicted RBP	11.43	□□□□□ -0.58
CDK11A-222	ENST00000498810	SLC5A9	Q2M3M2	681 aa		11.43	□□□□□ -0.58
CDK11A-222	ENST00000498810	PARM1	Q6UWI2	310 aa		11.43	□□□□□ -0.58
CDK11A-222	ENST00000498810	SPATA2L	Q8IUW3	424 aa	Predicted RBP	11.43	□□□□□ -0.58
CDK11A-222	ENST00000498810	PDCL2	Q8N4E4	241 aa		11.43	□□□□□ -0.58
CDK11A-222	ENST00000498810	TOP6BL	Q8N6T0	577 aa		11.43	□□□□□ -0.58
CDK11A-222	ENST00000498810	KIAA0895	Q8NCT3	520 aa		11.43	□□□□□ -0.58
CDK11A-222	ENST00000498810	OR5B17	Q8NGF7	314 aa		11.43	□□□□□ -0.58
CDK11A-222	ENST00000498810	ASIC4	Q96FT7	647 aa		11.43	□□□□□ -0.58
CDK11A-222	ENST00000498810	ZCWPW1	Q9H0M4	648 aa		11.43	□□□□□ -0.58
CDK11A-222	ENST00000498810	SNX25	Q9H3E2	840 aa		11.43	□□□□□ -0.58
CDK11A-222	ENST00000498810	GDE1	Q9NZC3	331 aa		11.43	□□□□□ -0.58
CDK11A-222	ENST00000498810	L1RE1	Q9UN81	338 aa		11.43	□□□□□ -0.58
CDK11A-222	ENST00000498810	ASB3	Q9Y575	518 aa		11.43	□□□□□ -0.58
CDK11A-222	ENST00000498810	DENND4C	Q5VZ89	1909 aa		11.43	□□□□□ -0.58
CDK11A-222	ENST00000498810	PTPRJ	Q12913	1337 aa		11.42	□□□□□ -0.58
CDK11A-222	ENST00000498810	ZNF318	Q5VUA4	2279 aa		11.42	□□□□□ -0.58
CDK11A-222	ENST00000498810	SMC2	O95347	1197 aa		11.42	□□□□□ -0.58
CDK11A-222	ENST00000498810	PDGFB	P01127	241 aa	Predicted RBP	11.42	□□□□□ -0.58
CDK11A-222	ENST00000498810	NR3C1	P04150	777 aa		11.42	□□□□□ -0.58
CDK11A-222	ENST00000498810	KRT13	P13646	458 aa		11.42	□□□□□ -0.58
CDK11A-222	ENST00000498810	TRIM21	P19474	475 aa	Known RBP	11.42	□□□□□ -0.58
CDK11A-222	ENST00000498810	GMPR	P36959	345 aa		11.42	□□□□□ -0.58
CDK11A-222	ENST00000498810	ZNF699	Q32M78	642 aa		11.42	□□□□□ -0.58
CDK11A-222	ENST00000498810	CENPP	Q6IPU0	288 aa		11.42	□□□□□ -0.58
CDK11A-222	ENST00000498810	TRAPPC11	Q7Z392	1133 aa		11.42	□□□□□ -0.58
CDK11A-222	ENST00000498810	C12orf56	Q8IXR9	622 aa		11.42	□□□□□ -0.58
CDK11A-222	ENST00000498810	YAF2	Q8IY57	180 aa		11.42	□□□□□ -0.58
CDK11A-222	ENST00000498810	SLC44A3	Q8N4M1	653 aa		11.42	□□□□□ -0.58
CDK11A-222	ENST00000498810	TTC9B	Q8N6N2	239 aa		11.42	□□□□□ -0.58
CDK11A-222	ENST00000498810	GPR152	Q8TDT2	470 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms