RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 NEO1Q92859 1461 aa12.18□□□□□ -0.46
PBX1-211ENST00000498497 A8MXQ7 604 aa12.18□□□□□ -0.46
PBX1-211ENST00000498497 RBAK-RBAKDNI3L0D1 243 aa12.18□□□□□ -0.46
PBX1-211ENST00000498497 PFDN6O15212 129 aa12.18□□□□□ -0.46
PBX1-211ENST00000498497 DNAJA2O60884 412 aa12.18□□□□□ -0.46
PBX1-211ENST00000498497 FAM58BPP0C7Q3 252 aa12.18□□□□□ -0.46
PBX1-211ENST00000498497 UCHL3P15374 230 aa12.18□□□□□ -0.46
PBX1-211ENST00000498497 COILP38432 576 aaPredicted RBP12.18□□□□□ -0.46
PBX1-211ENST00000498497 CDKL1Q00532 357 aa12.18□□□□□ -0.46
PBX1-211ENST00000498497 PTK7Q13308 1070 aa12.18□□□□□ -0.46
PBX1-211ENST00000498497 RGS21Q2M5E4 152 aa12.18□□□□□ -0.46
PBX1-211ENST00000498497 KRT80Q6KB66 452 aa12.18□□□□□ -0.46
PBX1-211ENST00000498497 ZCCHC23Q6ZST2 131 aa12.18□□□□□ -0.46
PBX1-211ENST00000498497 CROCCP2Q86T23 111 aa12.18□□□□□ -0.46
PBX1-211ENST00000498497 RASGEF1CQ8N431 466 aa12.18□□□□□ -0.46
PBX1-211ENST00000498497 FBXL16Q8N461 479 aa12.18□□□□□ -0.46
PBX1-211ENST00000498497 BBS2Q9BXC9 721 aa12.18□□□□□ -0.46
PBX1-211ENST00000498497 IKZF4Q9H2S9 585 aa12.18□□□□□ -0.46
PBX1-211ENST00000498497 BCL9O00512 1426 aa12.18□□□□□ -0.46
PBX1-211ENST00000498497 TOR1BO14657 336 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 TSPAN9O75954 239 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 CAMTA2O94983 1202 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 TNFAIP8O95379 198 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 GH2P01242 217 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 ATF2P15336 505 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 RRM1P23921 792 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 PPARGP37231 505 aaPredicted RBP12.17□□□□□ -0.46
PBX1-211ENST00000498497 CDK16Q00536 496 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 RASGRF1Q13972 1273 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 FAM47AQ5JRC9 791 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 TRAF7Q6Q0C0 670 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.17□□□□□ -0.46
PBX1-211ENST00000498497 MANSC1Q9H8J5 431 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 IFT122Q9HBG6 1241 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 PARP2Q9UGN5 583 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 COG5Q9UP83 839 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 BOLA1Q9Y3E2 137 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 PXDNLA1KZ92 1463 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 PRR36Q9H6K5 1346 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 POTEMA6NI47 508 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 SIN3BO75182 1162 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 BMP15O95972 392 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 UBL4AP11441 157 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 ZNF182P17025 639 aaPredicted RBP12.17□□□□□ -0.46
PBX1-211ENST00000498497 GRK2P25098 689 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 NDST2P52849 883 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 PDIA2Q13087 525 aaKnown RBP12.17□□□□□ -0.46
PBX1-211ENST00000498497 PPP1R3AQ16821 1122 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 C2CD6Q53TS8 623 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 GALNT18Q6P9A2 607 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 IRF2BP2Q7Z5L9 587 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 UBE2Q1Q7Z7E8 422 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 SLC15A4Q8N697 577 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 ZSCAN18Q8TBC5 510 aaPredicted RBP12.17□□□□□ -0.46
PBX1-211ENST00000498497 C12orf43Q96C57 262 aaKnown RBP12.17□□□□□ -0.46
PBX1-211ENST00000498497 SENP7Q9BQF6 1050 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 C12orf4Q9NQ89 552 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 ARHGEF4Q9NR80 690 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 KBTBD4Q9NVX7 518 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 TM7SF2O76062 418 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 TPPPO94811 219 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 CHRNA3P32297 505 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 AP3M2P53677 418 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 TAF12Q16514 161 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 EML3Q32P44 896 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 C10orf76Q5T2E6 689 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 TRMT10CQ7L0Y3 403 aaKnown RBP12.17□□□□□ -0.46
PBX1-211ENST00000498497 TRABD2AQ86V40 505 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 CROCCP3Q8IVE0 287 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 AGR3Q8TD06 166 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 SLC5A5Q92911 643 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 LRGUKQ96M69 825 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 HGH1Q9BTY7 390 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 MIR1-1HGQ9H1L0 117 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 VAT1LQ9HCJ6 419 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 PCDHB13Q9Y5F0 798 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 DGKBQ9Y6T7 804 aa12.17□□□□□ -0.46
PBX1-211ENST00000498497 ZMYM2Q9UBW7 1377 aa12.16□□□□□ -0.46
PBX1-211ENST00000498497 ATE1O95260 518 aa12.16□□□□□ -0.46
PBX1-211ENST00000498497 ZSCAN5DPP0CG00 497 aa12.16□□□□□ -0.46
PBX1-211ENST00000498497 LONP1P36776 959 aaKnown RBP12.16□□□□□ -0.46
PBX1-211ENST00000498497 ALCAMQ13740 583 aa12.16□□□□□ -0.46
PBX1-211ENST00000498497 GRM2Q14416 872 aa12.16□□□□□ -0.46
PBX1-211ENST00000498497 TNFAIP8L3Q5GJ75 292 aa12.16□□□□□ -0.46
PBX1-211ENST00000498497 CEP78Q5JTW2 689 aa12.16□□□□□ -0.46
PBX1-211ENST00000498497 C4orf22Q6V702 233 aa12.16□□□□□ -0.46
PBX1-211ENST00000498497 LRRC55Q6ZSA7 311 aa12.16□□□□□ -0.46
PBX1-211ENST00000498497 ERI1Q8IV48 349 aaKnown RBP12.16□□□□□ -0.46
PBX1-211ENST00000498497 TNS4Q8IZW8 715 aa12.16□□□□□ -0.46
PBX1-211ENST00000498497 ART4Q93070 314 aa12.16□□□□□ -0.46
PBX1-211ENST00000498497 MRPS26Q9BYN8 205 aaKnown RBP12.16□□□□□ -0.46
PBX1-211ENST00000498497 NUF2Q9BZD4 464 aa12.16□□□□□ -0.46
PBX1-211ENST00000498497 TP63Q9H3D4 680 aaPredicted RBP12.16□□□□□ -0.46
PBX1-211ENST00000498497 TOR3AQ9H497 397 aa12.16□□□□□ -0.46
PBX1-211ENST00000498497 RETREG1Q9H6L5 497 aa12.16□□□□□ -0.46
PBX1-211ENST00000498497 KLHL11Q9NVR0 708 aa12.16□□□□□ -0.46
PBX1-211ENST00000498497 ARHGEF28Q8N1W1 1705 aaKnown RBP12.16□□□□□ -0.46
PBX1-211ENST00000498497 ZBBXA8MT70 800 aa12.16□□□□□ -0.46
PBX1-211ENST00000498497 CASQ2O14958 399 aaPredicted RBP12.16□□□□□ -0.46
PBX1-211ENST00000498497 CLIC2O15247 247 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms