RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 TUFMP49411 452 aaKnown RBP6.54□□□□□ -1.36
SSBP1-213ENST00000496622 MXI1P50539 228 aa6.54□□□□□ -1.36
SSBP1-213ENST00000496622 ARHGAP1Q07960 439 aa6.54□□□□□ -1.36
SSBP1-213ENST00000496622 LAMTOR4Q0VGL1 99 aa6.54□□□□□ -1.36
SSBP1-213ENST00000496622 PAK2Q13177 524 aa6.54□□□□□ -1.36
SSBP1-213ENST00000496622 TTLL4Q14679 1199 aa6.54□□□□□ -1.36
SSBP1-213ENST00000496622 LBRQ14739 615 aaKnown RBP6.54□□□□□ -1.36
SSBP1-213ENST00000496622 NAA25Q14CX7 972 aa6.54□□□□□ -1.36
SSBP1-213ENST00000496622 LLGL1Q15334 1064 aa6.54□□□□□ -1.36
SSBP1-213ENST00000496622 SLC18A3Q16572 532 aa6.54□□□□□ -1.36
SSBP1-213ENST00000496622 KAZNQ674X7 775 aa6.54□□□□□ -1.36
SSBP1-213ENST00000496622 EFCAB12Q6NXP0 572 aa6.54□□□□□ -1.36
SSBP1-213ENST00000496622 NFRKBQ6P4R8 1299 aa6.54□□□□□ -1.36
SSBP1-213ENST00000496622 ALKBH5Q6P6C2 394 aaKnown RBP6.54□□□□□ -1.36
SSBP1-213ENST00000496622 FOXR1Q6PIV2 292 aa6.54□□□□□ -1.36
SSBP1-213ENST00000496622 INTS8Q75QN2 995 aaKnown RBP6.54□□□□□ -1.36
SSBP1-213ENST00000496622 SLC47A2Q86VL8 602 aa6.54□□□□□ -1.36
SSBP1-213ENST00000496622 LRRC49Q8IUZ0 686 aa6.54□□□□□ -1.36
SSBP1-213ENST00000496622 MFN1Q8IWA4 741 aa6.54□□□□□ -1.36
SSBP1-213ENST00000496622 THNSL1Q8IYQ7 743 aa6.54□□□□□ -1.36
SSBP1-213ENST00000496622 OR5B17Q8NGF7 314 aa6.54□□□□□ -1.36
SSBP1-213ENST00000496622 FRS2Q8WU20 508 aa6.54□□□□□ -1.36
SSBP1-213ENST00000496622 RABGGTAQ92696 567 aa6.54□□□□□ -1.36
SSBP1-213ENST00000496622 USP6NLQ92738 828 aa6.54□□□□□ -1.36
SSBP1-213ENST00000496622 TBC1D20Q96BZ9 403 aa6.54□□□□□ -1.36
SSBP1-213ENST00000496622 MAML3Q96JK9 1138 aa6.54□□□□□ -1.36
SSBP1-213ENST00000496622 KREMEN1Q96MU8 473 aa6.54□□□□□ -1.36
SSBP1-213ENST00000496622 RHOXF2Q9BQY4 288 aa6.54□□□□□ -1.36
SSBP1-213ENST00000496622 MKNK1Q9BUB5 465 aa6.54□□□□□ -1.36
SSBP1-213ENST00000496622 ARHGAP39Q9C0H5 1083 aa6.54□□□□□ -1.36
SSBP1-213ENST00000496622 OSGEPQ9NPF4 335 aa6.54□□□□□ -1.36
SSBP1-213ENST00000496622 MRGBPQ9NV56 204 aa6.54□□□□□ -1.36
SSBP1-213ENST00000496622 AIPL1Q9NZN9 384 aa6.54□□□□□ -1.36
SSBP1-213ENST00000496622 APEX2Q9UBZ4 518 aa6.54□□□□□ -1.36
SSBP1-213ENST00000496622 NAGPAQ9UK23 515 aa6.54□□□□□ -1.36
SSBP1-213ENST00000496622 SLC30A1Q9Y6M5 507 aa6.54□□□□□ -1.36
SSBP1-213ENST00000496622 LCTP09848 1927 aa6.54□□□□□ -1.36
SSBP1-213ENST00000496622 DOCK3Q8IZD9 2030 aa6.54□□□□□ -1.36
SSBP1-213ENST00000496622 H3BM21 787 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 CTGFP29279 349 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 HOXC13P31276 330 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 GMPRP36959 345 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 LMAN1P49257 510 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 NEK2P51955 445 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 JAM2P57087 298 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 CAP1Q01518 475 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 TAF1CQ15572 869 aaPredicted RBP6.53□□□□□ -1.36
SSBP1-213ENST00000496622 RNFT1Q5M7Z0 435 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 SPDYCQ5MJ68 293 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 ZNF449Q6P9G9 518 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 SNX32Q86XE0 403 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 SLC9A9Q8IVB4 645 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 ZNF295-AS1Q8N0V1 137 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 LNX1Q8TBB1 728 aaPredicted RBP6.53□□□□□ -1.36
SSBP1-213ENST00000496622 U2AF1L4Q8WU68 220 aaKnown RBP6.53□□□□□ -1.36
SSBP1-213ENST00000496622 SCFD2Q8WU76 684 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 MS4A14Q96JA4 679 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 CAPNS2Q96L46 248 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 MMS19Q96T76 1030 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 NAPGQ99747 312 aaPredicted RBP6.53□□□□□ -1.36
SSBP1-213ENST00000496622 NIFKQ9BYG3 293 aaKnown RBP6.53□□□□□ -1.36
SSBP1-213ENST00000496622 CXCL16Q9H2A7 254 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 PRO3102Q9H379 93 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 NRBP2Q9NSY0 501 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 PSD3Q9NYI0 1048 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 SUCLA2Q9P2R7 463 aaPredicted RBP6.53□□□□□ -1.36
SSBP1-213ENST00000496622 A6NJY4 79 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 MAFO75444 373 aaPredicted RBP6.53□□□□□ -1.36
SSBP1-213ENST00000496622 PALMO75781 387 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 RNF8O76064 485 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 SEC31AO94979 1220 aaKnown RBP6.53□□□□□ -1.36
SSBP1-213ENST00000496622 SGPL1O95470 568 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 CST3P01034 146 aaPredicted RBP6.53□□□□□ -1.36
SSBP1-213ENST00000496622 LGALS2P05162 132 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 ARPC4P59998 168 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 CCNA1P78396 465 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 CDK17Q00537 523 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 BEX3Q00994 111 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 STRN3Q13033 797 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 BRDTQ58F21 947 aaPredicted RBP6.53□□□□□ -1.36
SSBP1-213ENST00000496622 EGFLAMQ63HQ2 1017 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 EEF1DP3Q658K8 133 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 CAPRIN2Q6IMN6 1127 aaKnown RBP6.53□□□□□ -1.36
SSBP1-213ENST00000496622 SLC30A9Q6PML9 568 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 TREML4Q6UXN2 200 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 ERMP1Q7Z2K6 904 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 SLC15A3Q8IY34 581 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 VWA5B2Q8N398 1253 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 OLIG1Q8TAK6 271 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 ATP8B4Q8TF62 1192 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 STK32AQ8WU08 396 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.53□□□□□ -1.36
SSBP1-213ENST00000496622 ERO1AQ96HE7 468 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 SPATA17Q96L03 361 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 RNPC3Q96LT9 517 aaKnown RBP6.53□□□□□ -1.36
SSBP1-213ENST00000496622 MSTO1Q9BUK6 570 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 DNAI2Q9GZS0 605 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 KATNBL1Q9H079 304 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 ST6GALNAC4Q9H4F1 302 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 RUBCNLQ9H714 662 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms