RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 TKTP29401 623 aaKnown RBP2.86□□□□□ -1.95
MDC1-208ENST00000494654 GNA11P29992 359 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 SLC5A2P31639 672 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 FOXN2P32314 431 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 MAN1A1P33908 653 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 CA8P35219 290 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 IGHMBP2P38935 993 aaKnown RBP2.86□□□□□ -1.95
MDC1-208ENST00000494654 IL15P40933 162 aaPredicted RBP2.86□□□□□ -1.95
MDC1-208ENST00000494654 RPL21P46778 160 aaKnown RBP2.86□□□□□ -1.95
MDC1-208ENST00000494654 ALDH3B2P48448 385 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 HSPA13P48723 471 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 MXI1P50539 228 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 CDK9P50750 372 aaKnown RBP2.86□□□□□ -1.95
MDC1-208ENST00000494654 DNA2P51530 1060 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 HSD17B4P51659 736 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 CCR3P51677 355 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 NR1H2P55055 460 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 CSE1LP55060 971 aaKnown RBP2.86□□□□□ -1.95
MDC1-208ENST00000494654 HADHBP55084 474 aaKnown RBP2.86□□□□□ -1.95
MDC1-208ENST00000494654 AQP4P55087 323 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 ATP6V0D1P61421 351 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 NAA20P61599 178 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 TUBA1BP68363 451 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 DLG4P78352 724 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 CAV1Q03135 178 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 CDK18Q07002 472 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 CALCOCO2Q13137 446 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 EIF2B5Q13144 721 aaKnown RBP2.86□□□□□ -1.95
MDC1-208ENST00000494654 SNAPC2Q13487 334 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 THOC5Q13769 683 aaKnown RBP2.86□□□□□ -1.95
MDC1-208ENST00000494654 RAPGEF1Q13905 1077 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 RASGRF1Q13972 1273 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 STAT4Q14765 748 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 NR1D2Q14995 579 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 SUZ12Q15022 739 aaKnown RBP2.86□□□□□ -1.95
MDC1-208ENST00000494654 PDK3Q15120 406 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 RASA2Q15283 850 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 ALX1Q15699 326 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 SEPT7Q16181 437 aaKnown RBP2.86□□□□□ -1.95
MDC1-208ENST00000494654 LONRF1Q17RB8 773 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 EXOC3L4Q17RC7 722 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 MYLK3Q32MK0 819 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 EDRF1Q3B7T1 1238 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 PARP10Q53GL7 1025 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 NAALADL2Q58DX5 795 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 TMEM67Q5HYA8 995 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 TMEM63BQ5T3F8 832 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 OGFRL1Q5TC84 451 aaPredicted RBP2.86□□□□□ -1.95
MDC1-208ENST00000494654 SEL1L2Q5TEA6 688 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 DCAF12L1Q5VU92 463 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 METTL21CQ5VZV1 264 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 CENPPQ6IPU0 288 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 C11orf63Q6NUN7 778 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 FBXL19Q6PCT2 694 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 RHBDF2Q6PJF5 856 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 DCLRE1AQ6PJP8 1040 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 DCDC5Q6ZRR9 648 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 LRRC55Q6ZSA7 311 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 FAM47EQ6ZV65 393 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 CENPUQ71F23 418 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 TUBA1AQ71U36 451 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 PEX26Q7Z412 305 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 SAPCD2Q86UD0 394 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 CABP7Q86V35 215 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 ZNF410Q86VK4 478 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 LRRC6Q86X45 466 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 TDRPQ86YL5 185 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 RELL1Q8IUW5 271 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 ZC3H3Q8IXZ2 948 aaKnown RBP2.86□□□□□ -1.95
MDC1-208ENST00000494654 ZNF34Q8IZ26 560 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 SLC7A5P1Q8MH63 180 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 ANKRD35Q8N283 1001 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 GUF1Q8N442 669 aaKnown RBP2.86□□□□□ -1.95
MDC1-208ENST00000494654 CRACR2BQ8N4Y2 399 aaPredicted RBP2.86□□□□□ -1.95
MDC1-208ENST00000494654 VGLL2Q8N8G2 317 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 TERB1Q8NA31 727 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 PCYOX1LQ8NBM8 494 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 KIAA0895Q8NCT3 520 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 CATSPER1Q8NEC5 780 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 IL17REQ8NFR9 667 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 NLGN2Q8NFZ4 835 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 IGDCC4Q8TDY8 1250 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 RHBDD1Q8TEB9 315 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 GIPC3Q8TF64 312 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 CHPT1Q8WUD6 406 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 FAM172AQ8WUF8 416 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 PRPF31Q8WWY3 499 aaKnown RBP2.86□□□□□ -1.95
MDC1-208ENST00000494654 RFFLQ8WZ73 363 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 STAMQ92783 540 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 OSBP2Q969R2 916 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 MED30Q96HR3 178 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 CDK5RAP3Q96JB5 506 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 AK8Q96MA6 479 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 NSMCE3Q96MG7 304 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 CFAP57Q96MR6 1250 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 CNTNAP3BQ96NU0 1288 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 PANX3Q96QZ0 392 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 CRAMP1Q96RY5 1269 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 SRPK1Q96SB4 655 aaKnown RBP2.86□□□□□ -1.95
MDC1-208ENST00000494654 PRPF18Q99633 342 aaKnown RBP2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms