RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 ARFIP2P53365 341 aa5.41□□□□□ -1.54
SMC4-224ENST00000494612 BOP1Q14137 746 aaKnown RBP5.41□□□□□ -1.54
SMC4-224ENST00000494612 FAM209BQ5JX69 171 aa5.41□□□□□ -1.54
SMC4-224ENST00000494612 EMC10Q5UCC4 262 aa5.41□□□□□ -1.54
SMC4-224ENST00000494612 LMBRD2Q68DH5 695 aaPredicted RBP5.41□□□□□ -1.54
SMC4-224ENST00000494612 C11orf96Q7Z7L8 435 aa5.41□□□□□ -1.54
SMC4-224ENST00000494612 RHOT2Q8IXI1 618 aa5.41□□□□□ -1.54
SMC4-224ENST00000494612 SAMD3Q8N6K7 520 aa5.41□□□□□ -1.54
SMC4-224ENST00000494612 BOLLQ8N9W6 283 aaKnown RBP5.41□□□□□ -1.54
SMC4-224ENST00000494612 ACRBPQ8NEB7 543 aa5.41□□□□□ -1.54
SMC4-224ENST00000494612 SUCLG2Q96I99 432 aa5.41□□□□□ -1.54
SMC4-224ENST00000494612 TRIB1Q96RU8 372 aa5.41□□□□□ -1.54
SMC4-224ENST00000494612 SMOQ99835 787 aa5.41□□□□□ -1.54
SMC4-224ENST00000494612 SMOC2Q9H3U7 446 aa5.41□□□□□ -1.54
SMC4-224ENST00000494612 NLRC4Q9NPP4 1024 aa5.41□□□□□ -1.54
SMC4-224ENST00000494612 TBC1D23Q9NUY8 699 aa5.41□□□□□ -1.54
SMC4-224ENST00000494612 RLIMQ9NVW2 624 aa5.41□□□□□ -1.54
SMC4-224ENST00000494612 FAM30AQ9NZY2 134 aa5.41□□□□□ -1.54
SMC4-224ENST00000494612 XPR1Q9UBH6 696 aa5.41□□□□□ -1.54
SMC4-224ENST00000494612 ITGB1BP2Q9UKP3 347 aa5.41□□□□□ -1.54
SMC4-224ENST00000494612 DMTF1Q9Y222 760 aa5.41□□□□□ -1.54
SMC4-224ENST00000494612 MED16Q9Y2X0 877 aa5.41□□□□□ -1.54
SMC4-224ENST00000494612 GPANK1O95872 356 aa5.4□□□□□ -1.54
SMC4-224ENST00000494612 ANXA1P04083 346 aa5.4□□□□□ -1.54
SMC4-224ENST00000494612 PARP1P09874 1014 aaKnown RBP5.4□□□□□ -1.54
SMC4-224ENST00000494612 ITGAMP11215 1152 aa5.4□□□□□ -1.54
SMC4-224ENST00000494612 CASP5P51878 434 aa5.4□□□□□ -1.54
SMC4-224ENST00000494612 ZNF844Q08AG5 666 aa5.4□□□□□ -1.54
SMC4-224ENST00000494612 AMOTQ4VCS5 1084 aa5.4□□□□□ -1.54
SMC4-224ENST00000494612 DCAF12L1Q5VU92 463 aa5.4□□□□□ -1.54
SMC4-224ENST00000494612 RRAGBQ5VZM2 374 aa5.4□□□□□ -1.54
SMC4-224ENST00000494612 B3GNTL1Q67FW5 361 aaPredicted RBP5.4□□□□□ -1.54
SMC4-224ENST00000494612 TAPT1Q6NXT6 567 aa5.4□□□□□ -1.54
SMC4-224ENST00000494612 C1orf228Q6PIY5 440 aa5.4□□□□□ -1.54
SMC4-224ENST00000494612 FOXR2Q6PJQ5 311 aa5.4□□□□□ -1.54
SMC4-224ENST00000494612 GPR149Q86SP6 731 aa5.4□□□□□ -1.54
SMC4-224ENST00000494612 TMEM132CQ8N3T6 1108 aa5.4□□□□□ -1.54
SMC4-224ENST00000494612 OR56A3Q8NH54 315 aa5.4□□□□□ -1.54
SMC4-224ENST00000494612 GJA10Q969M2 543 aa5.4□□□□□ -1.54
SMC4-224ENST00000494612 SLC46A1Q96NT5 459 aa5.4□□□□□ -1.54
SMC4-224ENST00000494612 PNKPQ96T60 521 aa5.4□□□□□ -1.54
SMC4-224ENST00000494612 PSMD1Q99460 953 aa5.4□□□□□ -1.54
SMC4-224ENST00000494612 POLR3GLQ9BT43 218 aa5.4□□□□□ -1.54
SMC4-224ENST00000494612 MS4A7Q9GZW8 240 aaPredicted RBP5.4□□□□□ -1.54
SMC4-224ENST00000494612 BTBD1Q9H0C5 482 aa5.4□□□□□ -1.54
SMC4-224ENST00000494612 ZNF700Q9H0M5 742 aa5.4□□□□□ -1.54
SMC4-224ENST00000494612 PNPLA8Q9NP80 782 aa5.4□□□□□ -1.54
SMC4-224ENST00000494612 RNF181Q9P0P0 153 aa5.4□□□□□ -1.54
SMC4-224ENST00000494612 PLEKHM1Q9Y4G2 1056 aa5.4□□□□□ -1.54
SMC4-224ENST00000494612 TOR1BO14657 336 aa5.39□□□□□ -1.55
SMC4-224ENST00000494612 TPD52L2O43399 206 aaKnown RBP5.39□□□□□ -1.55
SMC4-224ENST00000494612 RASSF9O75901 435 aa5.39□□□□□ -1.55
SMC4-224ENST00000494612 CDKL5O76039 1030 aa5.39□□□□□ -1.55
SMC4-224ENST00000494612 IL18RAPO95256 599 aa5.39□□□□□ -1.55
SMC4-224ENST00000494612 FOSP01100 380 aaPredicted RBP5.39□□□□□ -1.55
SMC4-224ENST00000494612 PIM1P11309 404 aaPredicted RBP5.39□□□□□ -1.55
SMC4-224ENST00000494612 ABCB4P21439 1286 aa5.39□□□□□ -1.55
SMC4-224ENST00000494612 KRTAP10-7P60409 375 aaPredicted RBP5.39□□□□□ -1.55
SMC4-224ENST00000494612 MC2RQ01718 297 aa5.39□□□□□ -1.55
SMC4-224ENST00000494612 NHLH1Q02575 133 aa5.39□□□□□ -1.55
SMC4-224ENST00000494612 ZNF169Q14929 603 aaPredicted RBP5.39□□□□□ -1.55
SMC4-224ENST00000494612 FAM160B1Q5W0V3 765 aa5.39□□□□□ -1.55
SMC4-224ENST00000494612 TAF2Q6P1X5 1199 aa5.39□□□□□ -1.55
SMC4-224ENST00000494612 ZDHHC24Q6UX98 284 aa5.39□□□□□ -1.55
SMC4-224ENST00000494612 UNC13DQ70J99 1090 aa5.39□□□□□ -1.55
SMC4-224ENST00000494612 MAPKAPK5Q8IW41 473 aa5.39□□□□□ -1.55
SMC4-224ENST00000494612 SPICE1Q8N0Z3 855 aa5.39□□□□□ -1.55
SMC4-224ENST00000494612 CAGE1Q8TC20 777 aa5.39□□□□□ -1.55
SMC4-224ENST00000494612 KIAA1191Q96A73 305 aa5.39□□□□□ -1.55
SMC4-224ENST00000494612 RNF31Q96EP0 1072 aa5.39□□□□□ -1.55
SMC4-224ENST00000494612 SGCZQ96LD1 299 aa5.39□□□□□ -1.55
SMC4-224ENST00000494612 ARPC5LQ9BPX5 153 aa5.39□□□□□ -1.55
SMC4-224ENST00000494612 CNPPD1Q9BV87 410 aa5.39□□□□□ -1.55
SMC4-224ENST00000494612 CDC23Q9UJX2 597 aa5.39□□□□□ -1.55
SMC4-224ENST00000494612 HDAC9Q9UKV0 1011 aa5.39□□□□□ -1.55
SMC4-224ENST00000494612 FRMD4BQ9Y2L6 1034 aa5.39□□□□□ -1.55
SMC4-224ENST00000494612 PCDHGB2Q9Y5G2 931 aa5.39□□□□□ -1.55
SMC4-224ENST00000494612 COMMD10Q9Y6G5 202 aa5.39□□□□□ -1.55
SMC4-224ENST00000494612 TRIM43BA6NCK2 446 aa5.38□□□□□ -1.55
SMC4-224ENST00000494612 RASA4BC9J798 803 aa5.38□□□□□ -1.55
SMC4-224ENST00000494612 PYCARD-AS1I3L0S3 204 aa5.38□□□□□ -1.55
SMC4-224ENST00000494612 RASA4O43374 803 aa5.38□□□□□ -1.55
SMC4-224ENST00000494612 C1QL1O75973 258 aa5.38□□□□□ -1.55
SMC4-224ENST00000494612 IGLV2-14P01704 120 aa5.38□□□□□ -1.55
SMC4-224ENST00000494612 THP07101 528 aa5.38□□□□□ -1.55
SMC4-224ENST00000494612 FDXRP22570 491 aa5.38□□□□□ -1.55
SMC4-224ENST00000494612 RARRES1P49788 294 aa5.38□□□□□ -1.55
SMC4-224ENST00000494612 ITGA8P53708 1063 aa5.38□□□□□ -1.55
SMC4-224ENST00000494612 SIM1P81133 766 aaPredicted RBP5.38□□□□□ -1.55
SMC4-224ENST00000494612 MXRA7P84157 204 aa5.38□□□□□ -1.55
SMC4-224ENST00000494612 OCA2Q04671 838 aa5.38□□□□□ -1.55
SMC4-224ENST00000494612 RAB32Q13637 225 aa5.38□□□□□ -1.55
SMC4-224ENST00000494612 DAG1Q14118 895 aa5.38□□□□□ -1.55
SMC4-224ENST00000494612 CD300EQ496F6 205 aaPredicted RBP5.38□□□□□ -1.55
SMC4-224ENST00000494612 SLC44A4Q53GD3 710 aa5.38□□□□□ -1.55
SMC4-224ENST00000494612 HIBCHQ6NVY1 386 aaPredicted RBP5.38□□□□□ -1.55
SMC4-224ENST00000494612 MICU3Q86XE3 530 aa5.38□□□□□ -1.55
SMC4-224ENST00000494612 SLC44A3Q8N4M1 653 aa5.38□□□□□ -1.55
SMC4-224ENST00000494612 PSD4Q8NDX1 1056 aa5.38□□□□□ -1.55
SMC4-224ENST00000494612 DDX17Q92841 729 aaKnown RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms