RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 GOLPH3Q9H4A6 298 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 ATAD3AQ9NVI7 634 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 ENOPH1Q9UHY7 261 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 POLR1DQ9Y2S0 133 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 CYP26A1O43174 497 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 CPSF4O95639 269 aaKnown RBP8.16□□□□□ -1.1
BRCA1-221ENST00000493795 VCLP18206 1134 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 MAGEA4P43358 317 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 RXRGP48443 463 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 SERPINB8P50452 374 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 EPS8Q12929 822 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 TRAF2Q12933 501 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 KIAA0408Q6ZU52 694 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 DHX40Q8IX18 779 aaKnown RBP8.16□□□□□ -1.1
BRCA1-221ENST00000493795 SPATA33Q96N06 139 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 ZCCHC17Q9NP64 241 aaKnown RBP8.16□□□□□ -1.1
BRCA1-221ENST00000493795 PADI4Q9UM07 663 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 KIAA0586Q9BVV6 1533 aa8.16□□□□□ -1.1
BRCA1-221ENST00000493795 PCF11O94913 1555 aaKnown RBP8.15□□□□□ -1.1
BRCA1-221ENST00000493795 ASNSP08243 561 aa8.15□□□□□ -1.1
BRCA1-221ENST00000493795 ERVK-10P10266 1014 aa8.15□□□□□ -1.1
BRCA1-221ENST00000493795 NOS3P29474 1203 aa8.15□□□□□ -1.1
BRCA1-221ENST00000493795 YWHABP31946 246 aaKnown RBP8.15□□□□□ -1.1
BRCA1-221ENST00000493795 GRK3P35626 688 aa8.15□□□□□ -1.1
BRCA1-221ENST00000493795 ARHGDIBP52566 201 aa8.15□□□□□ -1.1
BRCA1-221ENST00000493795 GEMIN4P57678 1058 aaKnown RBP8.15□□□□□ -1.1
BRCA1-221ENST00000493795 RALGDSQ12967 914 aa8.15□□□□□ -1.1
BRCA1-221ENST00000493795 GALNTL6Q49A17 601 aa8.15□□□□□ -1.1
BRCA1-221ENST00000493795 ATP6AP1LQ52LC2 224 aa8.15□□□□□ -1.1
BRCA1-221ENST00000493795 TIGD7Q6NT04 549 aaPredicted RBP8.15□□□□□ -1.1
BRCA1-221ENST00000493795 C3orf62Q6ZUJ4 267 aa8.15□□□□□ -1.1
BRCA1-221ENST00000493795 C2orf69Q8N8R5 385 aa8.15□□□□□ -1.1
BRCA1-221ENST00000493795 MMP19Q99542 508 aa8.15□□□□□ -1.1
BRCA1-221ENST00000493795 OSBPL5Q9H0X9 879 aaPredicted RBP8.15□□□□□ -1.1
BRCA1-221ENST00000493795 SH3BP4Q9P0V3 963 aa8.15□□□□□ -1.1
BRCA1-221ENST00000493795 PRAG1Q86YV5 1406 aa8.15□□□□□ -1.1
BRCA1-221ENST00000493795 AKR1B1P15121 316 aa8.15□□□□□ -1.1
BRCA1-221ENST00000493795 ALOX12P18054 663 aa8.15□□□□□ -1.1
BRCA1-221ENST00000493795 ARF5P84085 180 aa8.15□□□□□ -1.1
BRCA1-221ENST00000493795 RHAGQ02094 409 aa8.15□□□□□ -1.1
BRCA1-221ENST00000493795 CENPCQ03188 943 aa8.15□□□□□ -1.1
BRCA1-221ENST00000493795 TRAF3Q13114 568 aa8.15□□□□□ -1.1
BRCA1-221ENST00000493795 DGKDQ16760 1214 aa8.15□□□□□ -1.1
BRCA1-221ENST00000493795 CLEC16AQ2KHT3 1053 aa8.15□□□□□ -1.1
BRCA1-221ENST00000493795 MZT2BQ6NZ67 158 aa8.15□□□□□ -1.1
BRCA1-221ENST00000493795 LPCAT2Q7L5N7 544 aa8.15□□□□□ -1.1
BRCA1-221ENST00000493795 ZNF589Q86UQ0 364 aaPredicted RBP8.15□□□□□ -1.1
BRCA1-221ENST00000493795 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.15□□□□□ -1.1
BRCA1-221ENST00000493795 USP13Q92995 863 aaPredicted RBP8.15□□□□□ -1.1
BRCA1-221ENST00000493795 CATSPER2Q96P56 530 aa8.15□□□□□ -1.1
BRCA1-221ENST00000493795 CINPQ9BW66 212 aaPredicted RBP8.15□□□□□ -1.1
BRCA1-221ENST00000493795 RAVER2Q9HCJ3 691 aaKnown RBP8.15□□□□□ -1.1
BRCA1-221ENST00000493795 COMMD8Q9NX08 183 aa8.15□□□□□ -1.1
BRCA1-221ENST00000493795 ZSWIM5Q9P217 1185 aa8.15□□□□□ -1.1
BRCA1-221ENST00000493795 LIMA1Q9UHB6 759 aaKnown RBP8.15□□□□□ -1.1
BRCA1-221ENST00000493795 ARHGAP31Q2M1Z3 1444 aa8.15□□□□□ -1.1
BRCA1-221ENST00000493795 MGAT4DA6NG13 374 aa8.15□□□□□ -1.1
BRCA1-221ENST00000493795 TAF4O00268 1085 aa8.15□□□□□ -1.1
BRCA1-221ENST00000493795 EXTL3O43909 919 aa8.15□□□□□ -1.1
BRCA1-221ENST00000493795 TNFRSF21O75509 655 aa8.15□□□□□ -1.1
BRCA1-221ENST00000493795 PLEKHA8P1O95397 391 aa8.15□□□□□ -1.1
BRCA1-221ENST00000493795 PAICSP22234 425 aaKnown RBP8.15□□□□□ -1.1
BRCA1-221ENST00000493795 SERPINB5P36952 375 aa8.15□□□□□ -1.1
BRCA1-221ENST00000493795 ACADSBP45954 432 aa8.15□□□□□ -1.1
BRCA1-221ENST00000493795 SNRNP48Q6IEG0 339 aaKnown RBP8.15□□□□□ -1.1
BRCA1-221ENST00000493795 PRMT9Q6P2P2 845 aa8.15□□□□□ -1.1
BRCA1-221ENST00000493795 MZT2AQ6P582 158 aa8.15□□□□□ -1.1
BRCA1-221ENST00000493795 BTN2A1Q7KYR7 527 aa8.15□□□□□ -1.1
BRCA1-221ENST00000493795 RTKN2Q8IZC4 609 aa8.15□□□□□ -1.1
BRCA1-221ENST00000493795 NMD3Q96D46 503 aaKnown RBP8.15□□□□□ -1.1
BRCA1-221ENST00000493795 PNKPQ96T60 521 aa8.15□□□□□ -1.1
BRCA1-221ENST00000493795 MLPHQ9BV36 600 aaPredicted RBP8.15□□□□□ -1.1
BRCA1-221ENST00000493795 WDR41Q9HAD4 459 aa8.15□□□□□ -1.1
BRCA1-221ENST00000493795 SNX12Q9UMY4 172 aa8.15□□□□□ -1.1
BRCA1-221ENST00000493795 MYL12BO14950 172 aa8.15□□□□□ -1.11
BRCA1-221ENST00000493795 VPS26AO75436 327 aa8.15□□□□□ -1.11
BRCA1-221ENST00000493795 ERN1O75460 977 aaKnown RBP8.15□□□□□ -1.11
BRCA1-221ENST00000493795 TADA2AO75478 443 aa8.15□□□□□ -1.11
BRCA1-221ENST00000493795 STX11O75558 287 aa8.15□□□□□ -1.11
BRCA1-221ENST00000493795 TSPAN9O75954 239 aa8.15□□□□□ -1.11
BRCA1-221ENST00000493795 MYL12AP19105 171 aa8.15□□□□□ -1.11
BRCA1-221ENST00000493795 PPP2R1BP30154 601 aa8.15□□□□□ -1.11
BRCA1-221ENST00000493795 TGFBR2P37173 567 aa8.15□□□□□ -1.11
BRCA1-221ENST00000493795 KCNJ6P48051 423 aa8.15□□□□□ -1.11
BRCA1-221ENST00000493795 RAB2AP61019 212 aa8.15□□□□□ -1.11
BRCA1-221ENST00000493795 RBP5P82980 135 aa8.15□□□□□ -1.11
BRCA1-221ENST00000493795 CDC42EP1Q00587 391 aa8.15□□□□□ -1.11
BRCA1-221ENST00000493795 SH2D3CQ8N5H7 860 aa8.15□□□□□ -1.11
BRCA1-221ENST00000493795 C9orf72Q96LT7 481 aa8.15□□□□□ -1.11
BRCA1-221ENST00000493795 KCTD14Q9BQ13 255 aaPredicted RBP8.15□□□□□ -1.11
BRCA1-221ENST00000493795 FRMD8Q9BZ67 464 aaPredicted RBP8.15□□□□□ -1.11
BRCA1-221ENST00000493795 ITGB1BP2Q9UKP3 347 aa8.15□□□□□ -1.11
BRCA1-221ENST00000493795 TMA7Q9Y2S6 64 aaKnown RBP8.15□□□□□ -1.11
BRCA1-221ENST00000493795 UBE2QL1A1L167 161 aa8.14□□□□□ -1.11
BRCA1-221ENST00000493795 POTECB2RU33 542 aa8.14□□□□□ -1.11
BRCA1-221ENST00000493795 GLRA3O75311 464 aa8.14□□□□□ -1.11
BRCA1-221ENST00000493795 CCDC166P0CW27 439 aa8.14□□□□□ -1.11
BRCA1-221ENST00000493795 PABPC1P11940 636 aaKnown RBP8.14□□□□□ -1.11
BRCA1-221ENST00000493795 TARSP26639 723 aaKnown RBP8.14□□□□□ -1.11
BRCA1-221ENST00000493795 GRIK3Q13003 919 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms