RNA–Protein interactions for RNA: ENST00000493647.1

RHBDF1-211, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-211ENST00000493647 CYP2F1P24903 491 aa12.87□□□□□ -0.35
RHBDF1-211ENST00000493647 BRD2P25440 801 aaKnown RBP12.87□□□□□ -0.35
RHBDF1-211ENST00000493647 ADORA2BP29275 332 aa12.87□□□□□ -0.35
RHBDF1-211ENST00000493647 CLCN1P35523 988 aa12.87□□□□□ -0.35
RHBDF1-211ENST00000493647 USP8P40818 1118 aa12.87□□□□□ -0.35
RHBDF1-211ENST00000493647 CYP27A1Q02318 531 aa12.87□□□□□ -0.35
RHBDF1-211ENST00000493647 SMARCB1Q12824 385 aa12.87□□□□□ -0.35
RHBDF1-211ENST00000493647 MAPRE1Q15691 268 aaKnown RBP12.87□□□□□ -0.35
RHBDF1-211ENST00000493647 PPP1R26Q5T8A7 1209 aaPredicted RBP12.87□□□□□ -0.35
RHBDF1-211ENST00000493647 ARHGAP17Q68EM7 881 aa12.87□□□□□ -0.35
RHBDF1-211ENST00000493647 ANKRD54Q6NXT1 300 aa12.87□□□□□ -0.35
RHBDF1-211ENST00000493647 SYCE2Q6PIF2 218 aa12.87□□□□□ -0.35
RHBDF1-211ENST00000493647 FAM35AQ86V20 835 aa12.87□□□□□ -0.35
RHBDF1-211ENST00000493647 SPATA2LQ8IUW3 424 aaPredicted RBP12.87□□□□□ -0.35
RHBDF1-211ENST00000493647 VSTM4Q8IW00 320 aa12.87□□□□□ -0.35
RHBDF1-211ENST00000493647 MAFAQ8NHW3 353 aaPredicted RBP12.87□□□□□ -0.35
RHBDF1-211ENST00000493647 SPPL2BQ8TCT7 592 aa12.87□□□□□ -0.35
RHBDF1-211ENST00000493647 SLC2A14Q8TDB8 520 aa12.87□□□□□ -0.35
RHBDF1-211ENST00000493647 C2orf15Q8WU43 125 aaKnown RBP12.87□□□□□ -0.35
RHBDF1-211ENST00000493647 HDAC7Q8WUI4 952 aa12.87□□□□□ -0.35
RHBDF1-211ENST00000493647 CASP10Q92851 521 aa12.87□□□□□ -0.35
RHBDF1-211ENST00000493647 ZNF707Q96C28 371 aaPredicted RBP12.87□□□□□ -0.35
RHBDF1-211ENST00000493647 PABPC5Q96DU9 382 aaKnown RBP12.87□□□□□ -0.35
RHBDF1-211ENST00000493647 HNRNPABQ99729 332 aaKnown RBP12.87□□□□□ -0.35
RHBDF1-211ENST00000493647 TRIM5Q9C035 493 aa12.87□□□□□ -0.35
RHBDF1-211ENST00000493647 PLEKHA4Q9H4M7 779 aa12.87□□□□□ -0.35
RHBDF1-211ENST00000493647 ABCB6Q9NP58 842 aa12.87□□□□□ -0.35
RHBDF1-211ENST00000493647 CEP72Q9P209 647 aa12.87□□□□□ -0.35
RHBDF1-211ENST00000493647 MAFFQ9ULX9 164 aa12.87□□□□□ -0.35
RHBDF1-211ENST00000493647 INSL5Q9Y5Q6 135 aa12.87□□□□□ -0.35
RHBDF1-211ENST00000493647 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.86□□□□□ -0.35
RHBDF1-211ENST00000493647 FSD2A1L4K1 749 aa12.86□□□□□ -0.35
RHBDF1-211ENST00000493647 O00370 1275 aa12.86□□□□□ -0.35
RHBDF1-211ENST00000493647 PRRG1O14668 218 aa12.86□□□□□ -0.35
RHBDF1-211ENST00000493647 PAPLNO95428 1278 aa12.86□□□□□ -0.35
RHBDF1-211ENST00000493647 VDRP11473 427 aa12.86□□□□□ -0.35
RHBDF1-211ENST00000493647 CD19P15391 556 aa12.86□□□□□ -0.35
RHBDF1-211ENST00000493647 ATF6P18850 670 aa12.86□□□□□ -0.35
RHBDF1-211ENST00000493647 SSTR3P32745 418 aaPredicted RBP12.86□□□□□ -0.35
RHBDF1-211ENST00000493647 MAGEA11P43364 429 aa12.86□□□□□ -0.35
RHBDF1-211ENST00000493647 CFAP221Q4G0U5 840 aa12.86□□□□□ -0.35
RHBDF1-211ENST00000493647 SDHAF4Q5VUM1 108 aa12.86□□□□□ -0.35
RHBDF1-211ENST00000493647 E4F1Q66K89 784 aaPredicted RBP12.86□□□□□ -0.35
RHBDF1-211ENST00000493647 C4orf50Q6ZRC1 276 aa12.86□□□□□ -0.35
RHBDF1-211ENST00000493647 STKLD1Q8NE28 680 aa12.86□□□□□ -0.35
RHBDF1-211ENST00000493647 CYFIP2Q96F07 1278 aa12.86□□□□□ -0.35
RHBDF1-211ENST00000493647 FUBP3Q96I24 572 aaKnown RBP eCLIP12.86□□□□□ -0.35
RHBDF1-211ENST00000493647 MSLNLQ96KJ4 702 aa12.86□□□□□ -0.35
RHBDF1-211ENST00000493647 SEPT5Q99719 369 aaPredicted RBP12.86□□□□□ -0.35
RHBDF1-211ENST00000493647 SMOQ99835 787 aa12.86□□□□□ -0.35
RHBDF1-211ENST00000493647 MED10Q9BTT4 135 aa12.86□□□□□ -0.35
RHBDF1-211ENST00000493647 APOL5Q9BWW9 433 aa12.86□□□□□ -0.35
RHBDF1-211ENST00000493647 PRDM6Q9NQX0 595 aa12.86□□□□□ -0.35
RHBDF1-211ENST00000493647 KRT82Q9NSB4 513 aa12.86□□□□□ -0.35
RHBDF1-211ENST00000493647 DZANK1Q9NVP4 752 aa12.86□□□□□ -0.35
RHBDF1-211ENST00000493647 CDH22Q9UJ99 828 aa12.86□□□□□ -0.35
RHBDF1-211ENST00000493647 DAAM1Q9Y4D1 1078 aa12.86□□□□□ -0.35
RHBDF1-211ENST00000493647 ITIH6Q6UXX5 1313 aa12.86□□□□□ -0.35
RHBDF1-211ENST00000493647 CCL16O15467 120 aa12.85□□□□□ -0.35
RHBDF1-211ENST00000493647 NCK2O43639 380 aa12.85□□□□□ -0.35
RHBDF1-211ENST00000493647 BEST1O76090 585 aa12.85□□□□□ -0.35
RHBDF1-211ENST00000493647 GFPT2O94808 682 aa12.85□□□□□ -0.35
RHBDF1-211ENST00000493647 GYPCP04921 128 aa12.85□□□□□ -0.35
RHBDF1-211ENST00000493647 TPM3P06753 285 aa12.85□□□□□ -0.35
RHBDF1-211ENST00000493647 CFHP08603 1231 aa12.85□□□□□ -0.35
RHBDF1-211ENST00000493647 TRIM21P19474 475 aaKnown RBP12.85□□□□□ -0.35
RHBDF1-211ENST00000493647 ELF1P32519 619 aa12.85□□□□□ -0.35
RHBDF1-211ENST00000493647 SOX5P35711 763 aa12.85□□□□□ -0.35
RHBDF1-211ENST00000493647 TWF1Q12792 350 aa12.85□□□□□ -0.35
RHBDF1-211ENST00000493647 SKIV2LQ15477 1246 aaKnown RBP12.85□□□□□ -0.35
RHBDF1-211ENST00000493647 DDR2Q16832 855 aa12.85□□□□□ -0.35
RHBDF1-211ENST00000493647 GOLGA7BQ2TAP0 167 aa12.85□□□□□ -0.35
RHBDF1-211ENST00000493647 MGAT5BQ3V5L5 792 aa12.85□□□□□ -0.35
RHBDF1-211ENST00000493647 SGO2Q562F6 1265 aa12.85□□□□□ -0.35
RHBDF1-211ENST00000493647 FIGNQ5HY92 759 aa12.85□□□□□ -0.35
RHBDF1-211ENST00000493647 PPM1LQ5SGD2 360 aa12.85□□□□□ -0.35
RHBDF1-211ENST00000493647 RARS2Q5T160 578 aaKnown RBP12.85□□□□□ -0.35
RHBDF1-211ENST00000493647 LIN9Q5TKA1 542 aa12.85□□□□□ -0.35
RHBDF1-211ENST00000493647 SMYD5Q6GMV2 418 aa12.85□□□□□ -0.35
RHBDF1-211ENST00000493647 EP400NLQ6ZTU2 488 aa12.85□□□□□ -0.35
RHBDF1-211ENST00000493647 CCDC149Q6ZUS6 474 aa12.85□□□□□ -0.35
RHBDF1-211ENST00000493647 SLC47A2Q86VL8 602 aa12.85□□□□□ -0.35
RHBDF1-211ENST00000493647 TTC30AQ86WT1 665 aa12.85□□□□□ -0.35
RHBDF1-211ENST00000493647 ZMIZ2Q8NF64 920 aa12.85□□□□□ -0.35
RHBDF1-211ENST00000493647 GPR152Q8TDT2 470 aa12.85□□□□□ -0.35
RHBDF1-211ENST00000493647 SPAG5Q96R06 1193 aa12.85□□□□□ -0.35
RHBDF1-211ENST00000493647 S1PR5Q9H228 398 aa12.85□□□□□ -0.35
RHBDF1-211ENST00000493647 UBE2ZQ9H832 354 aaPredicted RBP12.85□□□□□ -0.35
RHBDF1-211ENST00000493647 HSFX1Q9UBD0 423 aa12.85□□□□□ -0.35
RHBDF1-211ENST00000493647 BRWD1Q9NSI6 2320 aa12.85□□□□□ -0.35
RHBDF1-211ENST00000493647 LRRC53A6NM62 1247 aa12.84□□□□□ -0.35
RHBDF1-211ENST00000493647 F8VP50 259 aa12.84□□□□□ -0.35
RHBDF1-211ENST00000493647 H3BQ06 376 aaPredicted RBP12.84□□□□□ -0.35
RHBDF1-211ENST00000493647 AP1G2O75843 785 aa12.84□□□□□ -0.35
RHBDF1-211ENST00000493647 MICAL2O94851 1124 aa12.84□□□□□ -0.35
RHBDF1-211ENST00000493647 GNA15P30679 374 aa12.84□□□□□ -0.35
RHBDF1-211ENST00000493647 HOXA9P31269 272 aa12.84□□□□□ -0.35
RHBDF1-211ENST00000493647 STAT1P42224 750 aa12.84□□□□□ -0.35
RHBDF1-211ENST00000493647 TUFMP49411 452 aaKnown RBP12.84□□□□□ -0.35
RHBDF1-211ENST00000493647 CLUL1Q15846 466 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms