RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 GTF2BQ00403 316 aa11.85□□□□□ -0.51
SND1-215ENST00000492772 NR1H3Q13133 447 aa11.85□□□□□ -0.51
SND1-215ENST00000492772 PSMD2Q13200 908 aa11.85□□□□□ -0.51
SND1-215ENST00000492772 USP39Q53GS9 565 aaKnown RBP11.85□□□□□ -0.51
SND1-215ENST00000492772 PMS2CLQ68D20 193 aa11.85□□□□□ -0.51
SND1-215ENST00000492772 MCTP1Q6DN14 999 aa11.85□□□□□ -0.51
SND1-215ENST00000492772 CYP2U1Q7Z449 544 aa11.85□□□□□ -0.51
SND1-215ENST00000492772 PI4K2AQ9BTU6 479 aa11.85□□□□□ -0.51
SND1-215ENST00000492772 TMEM9BQ9NQ34 198 aa11.85□□□□□ -0.51
SND1-215ENST00000492772 POLR3BQ9NW08 1133 aaPredicted RBP11.85□□□□□ -0.51
SND1-215ENST00000492772 AGO2Q9UKV8 859 aaKnown RBP11.85□□□□□ -0.51
SND1-215ENST00000492772 BAHCC1Q9P281 2608 aa11.84□□□□□ -0.51
SND1-215ENST00000492772 C1QTNF9BB2RNN3 333 aa11.84□□□□□ -0.51
SND1-215ENST00000492772 KHNYNO15037 678 aaKnown RBP11.84□□□□□ -0.51
SND1-215ENST00000492772 TADA3O75528 432 aa11.84□□□□□ -0.51
SND1-215ENST00000492772 C1QTNF9P0C862 333 aa11.84□□□□□ -0.51
SND1-215ENST00000492772 CEACAM1P13688 526 aa11.84□□□□□ -0.51
SND1-215ENST00000492772 CSRP1P21291 193 aaKnown RBP11.84□□□□□ -0.51
SND1-215ENST00000492772 GPR15P49685 360 aa11.84□□□□□ -0.51
SND1-215ENST00000492772 PDE6CP51160 858 aa11.84□□□□□ -0.51
SND1-215ENST00000492772 FOXC1Q12948 553 aa11.84□□□□□ -0.51
SND1-215ENST00000492772 EML3Q32P44 896 aa11.84□□□□□ -0.51
SND1-215ENST00000492772 SH3PXD2AQ5TCZ1 1133 aa11.84□□□□□ -0.51
SND1-215ENST00000492772 NAIF1Q69YI7 327 aaPredicted RBP11.84□□□□□ -0.51
SND1-215ENST00000492772 EFCAB13Q8IY85 973 aa11.84□□□□□ -0.51
SND1-215ENST00000492772 TMEM86AQ8N2M4 240 aa11.84□□□□□ -0.51
SND1-215ENST00000492772 FSIP1Q8NA03 581 aa11.84□□□□□ -0.51
SND1-215ENST00000492772 KDF1Q8NAX2 398 aaPredicted RBP11.84□□□□□ -0.51
SND1-215ENST00000492772 EZH1Q92800 747 aaPredicted RBP11.84□□□□□ -0.51
SND1-215ENST00000492772 HVCN1Q96D96 273 aa11.84□□□□□ -0.51
SND1-215ENST00000492772 MYRFLQ96LU7 910 aa11.84□□□□□ -0.51
SND1-215ENST00000492772 ACBD6Q9BR61 282 aa11.84□□□□□ -0.51
SND1-215ENST00000492772 ADAM33Q9BZ11 813 aa11.84□□□□□ -0.51
SND1-215ENST00000492772 ST6GALNAC4Q9H4F1 302 aa11.84□□□□□ -0.51
SND1-215ENST00000492772 ZHX3Q9H4I2 956 aa11.84□□□□□ -0.51
SND1-215ENST00000492772 TRPC7Q9HCX4 862 aa11.84□□□□□ -0.51
SND1-215ENST00000492772 TMLHEQ9NVH6 421 aa11.84□□□□□ -0.51
SND1-215ENST00000492772 ZMIZ1Q9ULJ6 1067 aa11.84□□□□□ -0.51
SND1-215ENST00000492772 WNT6Q9Y6F9 365 aa11.84□□□□□ -0.51
SND1-215ENST00000492772 STYXL1Q9Y6J8 313 aa11.84□□□□□ -0.51
SND1-215ENST00000492772 IGF2RP11717 2491 aa11.84□□□□□ -0.51
SND1-215ENST00000492772 CACNA1GO43497 2377 aa11.84□□□□□ -0.51
SND1-215ENST00000492772 ANAPC1Q9H1A4 1944 aa11.84□□□□□ -0.51
SND1-215ENST00000492772 SPEGQ15772 3267 aa11.84□□□□□ -0.51
SND1-215ENST00000492772 THADAQ6YHU6 1953 aa11.83□□□□□ -0.52
SND1-215ENST00000492772 ANKRD63C9JTQ0 380 aa11.83□□□□□ -0.52
SND1-215ENST00000492772 GIPC1O14908 333 aa11.83□□□□□ -0.52
SND1-215ENST00000492772 HUS1O60921 280 aa11.83□□□□□ -0.52
SND1-215ENST00000492772 NFATC1O95644 943 aa11.83□□□□□ -0.52
SND1-215ENST00000492772 TCF3P15923 654 aa11.83□□□□□ -0.52
SND1-215ENST00000492772 UBA7P41226 1012 aa11.83□□□□□ -0.52
SND1-215ENST00000492772 MYL7Q01449 175 aa11.83□□□□□ -0.52
SND1-215ENST00000492772 DHX8Q14562 1220 aaKnown RBP11.83□□□□□ -0.52
SND1-215ENST00000492772 KCNB1Q14721 858 aa11.83□□□□□ -0.52
SND1-215ENST00000492772 INTS6LQ5JSJ4 861 aaKnown RBP11.83□□□□□ -0.52
SND1-215ENST00000492772 RASSF3Q86WH2 238 aa11.83□□□□□ -0.52
SND1-215ENST00000492772 PDCL2Q8N4E4 241 aa11.83□□□□□ -0.52
SND1-215ENST00000492772 STKLD1Q8NE28 680 aa11.83□□□□□ -0.52
SND1-215ENST00000492772 TTC16Q8NEE8 873 aa11.83□□□□□ -0.52
SND1-215ENST00000492772 RASSF8Q8NHQ8 419 aa11.83□□□□□ -0.52
SND1-215ENST00000492772 SPATA18Q8TC71 538 aa11.83□□□□□ -0.52
SND1-215ENST00000492772 RAD54LQ92698 747 aa11.83□□□□□ -0.52
SND1-215ENST00000492772 CNOT6LQ96LI5 555 aaKnown RBP11.83□□□□□ -0.52
SND1-215ENST00000492772 FIZ1Q96SL8 496 aa11.83□□□□□ -0.52
SND1-215ENST00000492772 RALYQ9UKM9 306 aaKnown RBP11.83□□□□□ -0.52
SND1-215ENST00000492772 L1RE1Q9UN81 338 aa11.83□□□□□ -0.52
SND1-215ENST00000492772 WASF3Q9UPY6 502 aa11.83□□□□□ -0.52
SND1-215ENST00000492772 TNRC6BQ9UPQ9 1833 aaKnown RBP11.83□□□□□ -0.52
SND1-215ENST00000492772 ATRXP46100 2492 aa11.82□□□□□ -0.52
SND1-215ENST00000492772 TISP43B9A030 160 aa11.82□□□□□ -0.52
SND1-215ENST00000492772 PLCG1P19174 1290 aa11.82□□□□□ -0.52
SND1-215ENST00000492772 MCM6Q14566 821 aa11.82□□□□□ -0.52
SND1-215ENST00000492772 POSTNQ15063 836 aa11.82□□□□□ -0.52
SND1-215ENST00000492772 DDR2Q16832 855 aa11.82□□□□□ -0.52
SND1-215ENST00000492772 CFAP221Q4G0U5 840 aa11.82□□□□□ -0.52
SND1-215ENST00000492772 ZC2HC1CQ53FD0 456 aaPredicted RBP11.82□□□□□ -0.52
SND1-215ENST00000492772 SDHAF4Q5VUM1 108 aa11.82□□□□□ -0.52
SND1-215ENST00000492772 ANO7Q6IWH7 933 aa11.82□□□□□ -0.52
SND1-215ENST00000492772 LRRC52Q8N7C0 313 aa11.82□□□□□ -0.52
SND1-215ENST00000492772 SH3RF2Q8TEC5 729 aa11.82□□□□□ -0.52
SND1-215ENST00000492772 USP33Q8TEY7 942 aa11.82□□□□□ -0.52
SND1-215ENST00000492772 POMGNT1Q8WZA1 660 aa11.82□□□□□ -0.52
SND1-215ENST00000492772 FUBP3Q96I24 572 aaKnown RBP eCLIP11.82□□□□□ -0.52
SND1-215ENST00000492772 TMEM121BQ9BXQ6 578 aaPredicted RBP11.82□□□□□ -0.52
SND1-215ENST00000492772 TPSD1Q9BZJ3 242 aa11.82□□□□□ -0.52
SND1-215ENST00000492772 BLOC1S4Q9NUP1 217 aa11.82□□□□□ -0.52
SND1-215ENST00000492772 DDX43Q9NXZ2 648 aaKnown RBP11.82□□□□□ -0.52
SND1-215ENST00000492772 EVLQ9UI08 416 aaPredicted RBP11.82□□□□□ -0.52
SND1-215ENST00000492772 MMP17Q9ULZ9 603 aa11.82□□□□□ -0.52
SND1-215ENST00000492772 ARHGAP26Q9UNA1 814 aa11.82□□□□□ -0.52
SND1-215ENST00000492772 ASPMQ8IZT6 3477 aa11.82□□□□□ -0.52
SND1-215ENST00000492772 PTPRDP23468 1912 aa11.82□□□□□ -0.52
SND1-215ENST00000492772 PLXND1Q9Y4D7 1925 aa11.82□□□□□ -0.52
SND1-215ENST00000492772 AKAP13Q12802 2813 aa11.81□□□□□ -0.52
SND1-215ENST00000492772 ALDH1A2O94788 518 aa11.81□□□□□ -0.52
SND1-215ENST00000492772 ITGB3P05106 788 aa11.81□□□□□ -0.52
SND1-215ENST00000492772 PFKLP17858 780 aa11.81□□□□□ -0.52
SND1-215ENST00000492772 CYP2F1P24903 491 aa11.81□□□□□ -0.52
SND1-215ENST00000492772 PCSK1P29120 753 aa11.81□□□□□ -0.52
SND1-215ENST00000492772 POLR2BP30876 1174 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms