RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-231ENST00000492170 AMPD2Q01433 879 aa16.45■□□□□ 0.22
MRPL55-231ENST00000492170 DMWDQ09019 674 aa16.45■□□□□ 0.22
MRPL55-231ENST00000492170 GRSF1Q12849 480 aaKnown RBP eCLIP16.45■□□□□ 0.22
MRPL55-231ENST00000492170 ZNF268Q14587 947 aaPredicted RBP16.45■□□□□ 0.22
MRPL55-231ENST00000492170 DDR2Q16832 855 aa16.45■□□□□ 0.22
MRPL55-231ENST00000492170 CFAP221Q4G0U5 840 aa16.45■□□□□ 0.22
MRPL55-231ENST00000492170 LMBRD2Q68DH5 695 aaPredicted RBP16.45■□□□□ 0.22
MRPL55-231ENST00000492170 HEATR6Q6AI08 1181 aaKnown RBP16.45■□□□□ 0.22
MRPL55-231ENST00000492170 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.45■□□□□ 0.22
MRPL55-231ENST00000492170 OSTM1Q86WC4 334 aa16.45■□□□□ 0.22
MRPL55-231ENST00000492170 LINC00301Q8NCQ3 95 aa16.45■□□□□ 0.22
MRPL55-231ENST00000492170 TRMT2BQ96GJ1 504 aaKnown RBP16.45■□□□□ 0.22
MRPL55-231ENST00000492170 FUBP3Q96I24 572 aaKnown RBP eCLIP16.45■□□□□ 0.22
MRPL55-231ENST00000492170 PKMYT1Q99640 499 aa16.45■□□□□ 0.22
MRPL55-231ENST00000492170 CUEDC2Q9H467 287 aa16.45■□□□□ 0.22
MRPL55-231ENST00000492170 EBF3Q9H4W6 596 aa16.45■□□□□ 0.22
MRPL55-231ENST00000492170 PARD6AQ9NPB6 346 aa16.45■□□□□ 0.22
MRPL55-231ENST00000492170 HPS4Q9NQG7 708 aa16.45■□□□□ 0.22
MRPL55-231ENST00000492170 INTS13Q9NVM9 706 aa16.45■□□□□ 0.22
MRPL55-231ENST00000492170 GTF3C4Q9UKN8 822 aa16.45■□□□□ 0.22
MRPL55-231ENST00000492170 KIF26AQ9ULI4 1882 aaPredicted RBP16.44■□□□□ 0.22
MRPL55-231ENST00000492170 GABRDO14764 452 aa16.44■□□□□ 0.22
MRPL55-231ENST00000492170 SPTLC2O15270 562 aa16.44■□□□□ 0.22
MRPL55-231ENST00000492170 LRP3O75074 770 aa16.44■□□□□ 0.22
MRPL55-231ENST00000492170 TADA3O75528 432 aa16.44■□□□□ 0.22
MRPL55-231ENST00000492170 TGM1P22735 817 aa16.44■□□□□ 0.22
MRPL55-231ENST00000492170 HOXA6P31267 233 aa16.44■□□□□ 0.22
MRPL55-231ENST00000492170 AMPD3Q01432 767 aa16.44■□□□□ 0.22
MRPL55-231ENST00000492170 TRIM68Q6AZZ1 485 aa16.44■□□□□ 0.22
MRPL55-231ENST00000492170 DPH6Q7L8W6 267 aa16.44■□□□□ 0.22
MRPL55-231ENST00000492170 SCN4BQ8IWT1 228 aa16.44■□□□□ 0.22
MRPL55-231ENST00000492170 MYRFLQ96LU7 910 aa16.44■□□□□ 0.22
MRPL55-231ENST00000492170 KIAA1586Q9HCI6 787 aa16.44■□□□□ 0.22
MRPL55-231ENST00000492170 TRPC7Q9HCX4 862 aa16.44■□□□□ 0.22
MRPL55-231ENST00000492170 KBTBD4Q9NVX7 518 aa16.44■□□□□ 0.22
MRPL55-231ENST00000492170 TRAV19A0A0A6YYK7 116 aa16.43■□□□□ 0.22
MRPL55-231ENST00000492170 EIF3DO15371 548 aaKnown RBP eCLIP16.43■□□□□ 0.22
MRPL55-231ENST00000492170 HRO43593 1189 aa16.43■□□□□ 0.22
MRPL55-231ENST00000492170 PPP6R2O75170 966 aa16.43■□□□□ 0.22
MRPL55-231ENST00000492170 PDIA4P13667 645 aaKnown RBP16.43■□□□□ 0.22
MRPL55-231ENST00000492170 ASIC1P78348 528 aa16.43■□□□□ 0.22
MRPL55-231ENST00000492170 FAM160A1Q05DH4 1040 aa16.43■□□□□ 0.22
MRPL55-231ENST00000492170 SPEM2Q0P670 501 aa16.43■□□□□ 0.22
MRPL55-231ENST00000492170 SRSF5Q13243 272 aaKnown RBP16.43■□□□□ 0.22
MRPL55-231ENST00000492170 PDGFRLQ15198 375 aa16.43■□□□□ 0.22
MRPL55-231ENST00000492170 DUOXA2Q1HG44 320 aa16.43■□□□□ 0.22
MRPL55-231ENST00000492170 SOWAHAQ2M3V2 549 aa16.43■□□□□ 0.22
MRPL55-231ENST00000492170 TMEM196Q5HYL7 178 aa16.43■□□□□ 0.22
MRPL55-231ENST00000492170 SCARA3Q6AZY7 606 aa16.43■□□□□ 0.22
MRPL55-231ENST00000492170 C4orf50Q6ZRC1 276 aa16.43■□□□□ 0.22
MRPL55-231ENST00000492170 CEP68Q76N32 757 aa16.43■□□□□ 0.22
MRPL55-231ENST00000492170 WDR5BQ86VZ2 330 aa16.43■□□□□ 0.22
MRPL55-231ENST00000492170 CBWD2Q8IUF1 395 aa16.43■□□□□ 0.22
MRPL55-231ENST00000492170 FSIP1Q8NA03 581 aa16.43■□□□□ 0.22
MRPL55-231ENST00000492170 GLIS3Q8NEA6 775 aa16.43■□□□□ 0.22
MRPL55-231ENST00000492170 OR5B17Q8NGF7 314 aa16.43■□□□□ 0.22
MRPL55-231ENST00000492170 EXOC4Q96A65 974 aa16.43■□□□□ 0.22
MRPL55-231ENST00000492170 HPDLQ96IR7 371 aa16.43■□□□□ 0.22
MRPL55-231ENST00000492170 ZNF396Q96N95 335 aaPredicted RBP16.43■□□□□ 0.22
MRPL55-231ENST00000492170 SYT15Q9BQS2 421 aa16.43■□□□□ 0.22
MRPL55-231ENST00000492170 TRIM9Q9C026 710 aa16.43■□□□□ 0.22
MRPL55-231ENST00000492170 C2orf42Q9NWW7 574 aa16.43■□□□□ 0.22
MRPL55-231ENST00000492170 HSPBP1Q9NZL4 362 aa16.43■□□□□ 0.22
MRPL55-231ENST00000492170 DENND4CQ5VZ89 1909 aa16.43■□□□□ 0.22
MRPL55-231ENST00000492170 PTPRJQ12913 1337 aa16.43■□□□□ 0.22
MRPL55-231ENST00000492170 TRDMT1O14717 391 aaKnown RBP16.42■□□□□ 0.22
MRPL55-231ENST00000492170 HCRTO43612 131 aa16.42■□□□□ 0.22
MRPL55-231ENST00000492170 ATG13O75143 517 aa16.42■□□□□ 0.22
MRPL55-231ENST00000492170 CKMP06732 381 aa16.42■□□□□ 0.22
MRPL55-231ENST00000492170 HSP90AA1P07900 732 aaKnown RBP16.42■□□□□ 0.22
MRPL55-231ENST00000492170 ARSAP15289 507 aa16.42■□□□□ 0.22
MRPL55-231ENST00000492170 MAGEA11P43364 429 aa16.42■□□□□ 0.22
MRPL55-231ENST00000492170 ATXN1P54253 815 aaKnown RBP16.42■□□□□ 0.22
MRPL55-231ENST00000492170 MTF1Q14872 753 aa16.42■□□□□ 0.22
MRPL55-231ENST00000492170 MAPRE1Q15691 268 aaKnown RBP16.42■□□□□ 0.22
MRPL55-231ENST00000492170 E2F4Q16254 413 aa16.42■□□□□ 0.22
MRPL55-231ENST00000492170 CCDC142Q17RM4 750 aa16.42■□□□□ 0.22
MRPL55-231ENST00000492170 FAM171BQ6P995 826 aa16.42■□□□□ 0.22
MRPL55-231ENST00000492170 WDR49Q8IV35 697 aa16.42■□□□□ 0.22
MRPL55-231ENST00000492170 CPA6Q8N4T0 437 aa16.42■□□□□ 0.22
MRPL55-231ENST00000492170 IQUBQ8NA54 791 aa16.42■□□□□ 0.22
MRPL55-231ENST00000492170 RIN3Q8TB24 985 aa16.42■□□□□ 0.22
MRPL55-231ENST00000492170 HPS3Q969F9 1004 aa16.42■□□□□ 0.22
MRPL55-231ENST00000492170 DHX58Q96C10 678 aa16.42■□□□□ 0.22
MRPL55-231ENST00000492170 RTKNQ9BST9 563 aa16.42■□□□□ 0.22
MRPL55-231ENST00000492170 CDH9Q9ULB4 789 aa16.42■□□□□ 0.22
MRPL55-231ENST00000492170 OBSL1O75147 1896 aa16.42■□□□□ 0.22
MRPL55-231ENST00000492170 NCOR2Q9Y618 2525 aa16.41■□□□□ 0.22
MRPL55-231ENST00000492170 ZNF638Q14966 1978 aaKnown RBP16.41■□□□□ 0.22
MRPL55-231ENST00000492170 OTOL1A6NHN0 477 aaPredicted RBP16.41■□□□□ 0.22
MRPL55-231ENST00000492170 YEATS4O95619 227 aa16.41■□□□□ 0.22
MRPL55-231ENST00000492170 USP17L7P0C7H9 530 aa16.41■□□□□ 0.22
MRPL55-231ENST00000492170 PSMC1P62191 440 aaKnown RBP16.41■□□□□ 0.22
MRPL55-231ENST00000492170 USP4Q13107 963 aa16.41■□□□□ 0.22
MRPL55-231ENST00000492170 KCNB1Q14721 858 aa16.41■□□□□ 0.22
MRPL55-231ENST00000492170 FAM26FQ5R3K3 315 aa16.41■□□□□ 0.22
MRPL55-231ENST00000492170 FSTL4Q6MZW2 842 aa16.41■□□□□ 0.22
MRPL55-231ENST00000492170 TTC16Q8NEE8 873 aa16.41■□□□□ 0.22
MRPL55-231ENST00000492170 KBTBD7Q8WVZ9 684 aa16.41■□□□□ 0.22
MRPL55-231ENST00000492170 MYLPFQ96A32 169 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms