RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 RBBP8NLQ8NC74 664 aaPredicted RBP8.82□□□□□ -1
SF1-218ENST00000489544 MYCBPAPQ8TBZ2 947 aa8.82□□□□□ -1
SF1-218ENST00000489544 SLC2A14Q8TDB8 520 aa8.82□□□□□ -1
SF1-218ENST00000489544 GIPC2Q8TF65 315 aa8.82□□□□□ -1
SF1-218ENST00000489544 TFAP2BQ92481 460 aa8.82□□□□□ -1
SF1-218ENST00000489544 HLA-CQ95604 372 aa8.82□□□□□ -1
SF1-218ENST00000489544 ZNF707Q96C28 371 aaPredicted RBP8.82□□□□□ -1
SF1-218ENST00000489544 HEXIM2Q96MH2 286 aaKnown RBP8.82□□□□□ -1
SF1-218ENST00000489544 ZSWIM1Q9BR11 485 aa8.82□□□□□ -1
SF1-218ENST00000489544 NT5C1AQ9BXI3 368 aa8.82□□□□□ -1
SF1-218ENST00000489544 OXCT2Q9BYC2 517 aaPredicted RBP8.82□□□□□ -1
SF1-218ENST00000489544 GPR88Q9GZN0 384 aa8.82□□□□□ -1
SF1-218ENST00000489544 S1PR5Q9H228 398 aa8.82□□□□□ -1
SF1-218ENST00000489544 GANQ9H2C0 597 aa8.82□□□□□ -1
SF1-218ENST00000489544 NLRC4Q9NPP4 1024 aa8.82□□□□□ -1
SF1-218ENST00000489544 HCFC1R1Q9NWW0 138 aa8.82□□□□□ -1
SF1-218ENST00000489544 YIPF1Q9Y548 306 aa8.82□□□□□ -1
SF1-218ENST00000489544 PCDHB5Q9Y5E4 795 aa8.82□□□□□ -1
SF1-218ENST00000489544 INSL5Q9Y5Q6 135 aa8.82□□□□□ -1
SF1-218ENST00000489544 XIRP2A4UGR9 3374 aa8.81□□□□□ -1
SF1-218ENST00000489544 FAM170AA1A519 330 aa8.81□□□□□ -1
SF1-218ENST00000489544 GRXCR2A6NFK2 248 aa8.81□□□□□ -1
SF1-218ENST00000489544 FOXN3O00409 490 aaPredicted RBP8.81□□□□□ -1
SF1-218ENST00000489544 NRG2O14511 850 aaPredicted RBP8.81□□□□□ -1
SF1-218ENST00000489544 BEST1O76090 585 aa8.81□□□□□ -1
SF1-218ENST00000489544 HAPLN1P10915 354 aaPredicted RBP8.81□□□□□ -1
SF1-218ENST00000489544 UCHL3P15374 230 aa8.81□□□□□ -1
SF1-218ENST00000489544 CD19P15391 556 aa8.81□□□□□ -1
SF1-218ENST00000489544 ATF6P18850 670 aa8.81□□□□□ -1
SF1-218ENST00000489544 BRD2P25440 801 aaKnown RBP8.81□□□□□ -1
SF1-218ENST00000489544 USP8P40818 1118 aa8.81□□□□□ -1
SF1-218ENST00000489544 KCNQ1P51787 676 aa8.81□□□□□ -1
SF1-218ENST00000489544 POLR2FP61218 127 aaKnown RBP8.81□□□□□ -1
SF1-218ENST00000489544 MTMR3Q13615 1198 aa8.81□□□□□ -1
SF1-218ENST00000489544 RAPGEF1Q13905 1077 aa8.81□□□□□ -1
SF1-218ENST00000489544 DRAP1Q14919 205 aaPredicted RBP8.81□□□□□ -1
SF1-218ENST00000489544 NFE2Q16621 373 aaPredicted RBP8.81□□□□□ -1
SF1-218ENST00000489544 FILIP1LQ4L180 1135 aa8.81□□□□□ -1
SF1-218ENST00000489544 PPP1R26Q5T8A7 1209 aaPredicted RBP8.81□□□□□ -1
SF1-218ENST00000489544 FAM35AQ86V20 835 aa8.81□□□□□ -1
SF1-218ENST00000489544 SCN4BQ8IWT1 228 aa8.81□□□□□ -1
SF1-218ENST00000489544 TCEAL8Q8IYN2 117 aa8.81□□□□□ -1
SF1-218ENST00000489544 HS6ST3Q8IZP7 471 aa8.81□□□□□ -1
SF1-218ENST00000489544 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.81□□□□□ -1
SF1-218ENST00000489544 JAKMIP2Q96AA8 810 aa8.81□□□□□ -1
SF1-218ENST00000489544 CYFIP2Q96F07 1278 aa8.81□□□□□ -1
SF1-218ENST00000489544 TMEM176AQ96HP8 235 aa8.81□□□□□ -1
SF1-218ENST00000489544 FAXDC2Q96IV6 333 aa8.81□□□□□ -1
SF1-218ENST00000489544 TNIP3Q96KP6 325 aa8.81□□□□□ -1
SF1-218ENST00000489544 ERGIC2Q96RQ1 377 aa8.81□□□□□ -1
SF1-218ENST00000489544 MED10Q9BTT4 135 aa8.81□□□□□ -1
SF1-218ENST00000489544 NAA15Q9BXJ9 866 aaKnown RBP8.81□□□□□ -1
SF1-218ENST00000489544 XPO4Q9C0E2 1151 aaKnown RBP8.81□□□□□ -1
SF1-218ENST00000489544 PLEKHA4Q9H4M7 779 aa8.81□□□□□ -1
SF1-218ENST00000489544 CEP72Q9P209 647 aa8.81□□□□□ -1
SF1-218ENST00000489544 CD207Q9UJ71 328 aa8.81□□□□□ -1
SF1-218ENST00000489544 BRWD1Q9NSI6 2320 aa8.81□□□□□ -1
SF1-218ENST00000489544 F8VP50 259 aa8.8□□□□□ -1
SF1-218ENST00000489544 CYP26A1O43174 497 aa8.8□□□□□ -1
SF1-218ENST00000489544 NCK2O43639 380 aa8.8□□□□□ -1
SF1-218ENST00000489544 LRG1P02750 347 aa8.8□□□□□ -1
SF1-218ENST00000489544 CFHP08603 1231 aa8.8□□□□□ -1
SF1-218ENST00000489544 SP100P23497 879 aaPredicted RBP8.8□□□□□ -1
SF1-218ENST00000489544 GRIK1P39086 918 aa8.8□□□□□ -1
SF1-218ENST00000489544 ZNF132P52740 706 aa8.8□□□□□ -1
SF1-218ENST00000489544 MFAP3P55082 362 aa8.8□□□□□ -1
SF1-218ENST00000489544 YWHAEP62258 255 aaKnown RBP8.8□□□□□ -1
SF1-218ENST00000489544 C4orf50Q6ZRC1 276 aa8.8□□□□□ -1
SF1-218ENST00000489544 CCDC149Q6ZUS6 474 aa8.8□□□□□ -1
SF1-218ENST00000489544 GRASPQ7Z6J2 395 aaPredicted RBP8.8□□□□□ -1
SF1-218ENST00000489544 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.8□□□□□ -1
SF1-218ENST00000489544 SMRP1Q8NCR6 262 aa8.8□□□□□ -1
SF1-218ENST00000489544 ZMIZ2Q8NF64 920 aa8.8□□□□□ -1
SF1-218ENST00000489544 SPPL2BQ8TCT7 592 aa8.8□□□□□ -1
SF1-218ENST00000489544 SHC3Q92529 594 aa8.8□□□□□ -1
SF1-218ENST00000489544 SMG7Q92540 1137 aaKnown RBP8.8□□□□□ -1
SF1-218ENST00000489544 KCNK16Q96T55 309 aa8.8□□□□□ -1
SF1-218ENST00000489544 SMOQ99835 787 aa8.8□□□□□ -1
SF1-218ENST00000489544 COL25A1Q9BXS0 654 aaPredicted RBP8.8□□□□□ -1
SF1-218ENST00000489544 PRKD2Q9BZL6 878 aa8.8□□□□□ -1
SF1-218ENST00000489544 SFXN1Q9H9B4 322 aa8.8□□□□□ -1
SF1-218ENST00000489544 PLCB1Q9NQ66 1216 aa8.8□□□□□ -1
SF1-218ENST00000489544 KRT82Q9NSB4 513 aa8.8□□□□□ -1
SF1-218ENST00000489544 DZANK1Q9NVP4 752 aa8.8□□□□□ -1
SF1-218ENST00000489544 DNMT3BQ9UBC3 853 aaKnown RBP8.8□□□□□ -1
SF1-218ENST00000489544 USP15Q9Y4E8 981 aaPredicted RBP8.8□□□□□ -1
SF1-218ENST00000489544 VCANP13611 3396 aa8.8□□□□□ -1
SF1-218ENST00000489544 F8VZ95 297 aa8.79□□□□□ -1
SF1-218ENST00000489544 TULP2O00295 520 aa8.79□□□□□ -1
SF1-218ENST00000489544 O00370 1275 aa8.79□□□□□ -1
SF1-218ENST00000489544 MBTPS2O43462 519 aa8.79□□□□□ -1
SF1-218ENST00000489544 AP1G2O75843 785 aa8.79□□□□□ -1
SF1-218ENST00000489544 SRGAP2BP0DMP2 458 aa8.79□□□□□ -1
SF1-218ENST00000489544 IL9P15248 144 aa8.79□□□□□ -1
SF1-218ENST00000489544 GJA1P17302 382 aa8.79□□□□□ -1
SF1-218ENST00000489544 HOXB8P17481 243 aaPredicted RBP8.79□□□□□ -1
SF1-218ENST00000489544 CLCN1P35523 988 aa8.79□□□□□ -1
SF1-218ENST00000489544 PBX1P40424 430 aa8.79□□□□□ -1
SF1-218ENST00000489544 CCR2P41597 374 aa8.79□□□□□ -1
SF1-218ENST00000489544 ALDH1A3P47895 512 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms