RNA–Protein interactions for RNA: ENST00000488117.5

C9orf72-205, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 2

Gene C9orf72, Length 4,808 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-205ENST00000488117 FAF2Q96CS3 445 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 CPB2Q96IY4 423 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 TGS1Q96RS0 853 aaKnown RBP2.78□□□□□ -1.96
C9orf72-205ENST00000488117 FDXACB1Q9BRP7 624 aaPredicted RBP2.78□□□□□ -1.96
C9orf72-205ENST00000488117 CDT1Q9H211 546 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 SEMA4AQ9H3S1 761 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 CHST7Q9NS84 486 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 DNAJC17Q9NVM6 304 aaKnown RBP2.78□□□□□ -1.96
C9orf72-205ENST00000488117 NINJ2Q9NZG7 142 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 TBK1Q9UHD2 729 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 BARX2Q9UMQ3 279 aaPredicted RBP2.78□□□□□ -1.96
C9orf72-205ENST00000488117 CNTN6Q9UQ52 1028 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 GINS2Q9Y248 185 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 EFR3BQ9Y2G0 817 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 ACTL7BQ9Y614 415 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 GRIN2DO15399 1336 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 ADGRA2Q96PE1 1338 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 ZC3H4Q9UPT8 1303 aaKnown RBP2.78□□□□□ -1.96
C9orf72-205ENST00000488117 TNRC18O15417 2968 aaPredicted RBP2.78□□□□□ -1.96
C9orf72-205ENST00000488117 hCG_1818297A0A087WSY0 165 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 H0YGN5 161 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 I3L4J1 428 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 PDHXO00330 501 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 MSCO60682 206 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 CPP00450 1065 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 CALCAP01258 141 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 SHBGP04278 402 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 INHBAP08476 426 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 MYL3P08590 195 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 GHRP10912 638 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 TSHRP16473 764 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 TGM2P21980 687 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 ASPAP45381 313 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 CPT1AP50416 773 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 ZNF132P52740 706 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 SEC24CP53992 1094 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 CDH6P55285 790 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 GEMIN4P57678 1058 aaKnown RBP2.78□□□□□ -1.96
C9orf72-205ENST00000488117 TAS2R40P59535 323 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 YWHAGP61981 247 aaKnown RBP eCLIP2.78□□□□□ -1.96
C9orf72-205ENST00000488117 SNCBQ16143 134 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 KYNUQ16719 465 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 C2CD6Q53TS8 623 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 ZBTB41Q5SVQ8 909 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 MFSD5Q6N075 450 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 DENND1BQ6P3S1 775 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 FOXR1Q6PIV2 292 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 ZNF467Q7Z7K2 595 aaPredicted RBP2.78□□□□□ -1.96
C9orf72-205ENST00000488117 SRRM1Q8IYB3 904 aaKnown RBP2.78□□□□□ -1.96
C9orf72-205ENST00000488117 NLGN2Q8NFZ4 835 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 GDAP1Q8TB36 358 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 ATXN2LQ8WWM7 1075 aaKnown RBP2.78□□□□□ -1.96
C9orf72-205ENST00000488117 ALKBH8Q96BT7 664 aaKnown RBP2.78□□□□□ -1.96
C9orf72-205ENST00000488117 ZNF668Q96K58 619 aaPredicted RBP2.78□□□□□ -1.96
C9orf72-205ENST00000488117 TNIP3Q96KP6 325 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 MAGEB18Q96M61 343 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 PCYT2Q99447 389 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 ELAC2Q9BQ52 826 aaKnown RBP2.78□□□□□ -1.96
C9orf72-205ENST00000488117 APOL6Q9BWW8 343 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 FAM49AQ9H0Q0 323 aaPredicted RBP2.78□□□□□ -1.96
C9orf72-205ENST00000488117 KDM4CQ9H3R0 1056 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 FZD8Q9H461 694 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 PLEKHA5Q9HAU0 1116 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 CDKN2AIPQ9NXV6 580 aaPredicted RBP2.78□□□□□ -1.96
C9orf72-205ENST00000488117 PAK5Q9P286 719 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 RGS17Q9UGC6 210 aaPredicted RBP2.78□□□□□ -1.96
C9orf72-205ENST00000488117 PCSK1NQ9UHG2 260 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 SLC24A2Q9UI40 661 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 UBQLN1Q9UMX0 589 aaKnown RBP2.78□□□□□ -1.96
C9orf72-205ENST00000488117 C2CD2Q9Y426 696 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 NFS1Q9Y697 457 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 A0A1B0GUA9 196 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 TMEM120BA0PK00 339 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 CFAP73A6NFT4 308 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 FAM47DPA6NHR8 397 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 A8MXQ7 604 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 BHMG1C9JSJ3 638 aaPredicted RBP2.78□□□□□ -1.96
C9orf72-205ENST00000488117 CST8O60676 142 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 HUS1O60921 280 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 ZWINTO95229 277 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 C22orf31O95567 290 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 MT-ND3P03897 115 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 VTNP04004 478 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 NFICP08651 508 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 PDGFRAP16234 1089 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 ADORA2AP29274 412 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 STIP1P31948 543 aaKnown RBP2.78□□□□□ -1.96
C9orf72-205ENST00000488117 SLC8A1P32418 973 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 CDH5P33151 784 aaPredicted RBP2.78□□□□□ -1.96
C9orf72-205ENST00000488117 GRM5P41594 1212 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 MMP13P45452 471 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 RASSF2P50749 326 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 ATP11AP98196 1134 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 PPARDQ03181 441 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 CNGA2Q16280 664 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 GPR162Q16538 588 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 CDO1Q16878 200 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 BBS9Q3SYG4 887 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 BOLA3Q53S33 107 aa2.78□□□□□ -1.96
C9orf72-205ENST00000488117 ERMARDQ5T6L9 678 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms