RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 CYP24A1Q07973 514 aa13.33□□□□□ -0.28
SREBF1-215ENST00000487401 TRPC3Q13507 836 aa13.33□□□□□ -0.28
SREBF1-215ENST00000487401 PSMD6Q15008 389 aa13.33□□□□□ -0.28
SREBF1-215ENST00000487401 MAPRE1Q15691 268 aaKnown RBP13.33□□□□□ -0.28
SREBF1-215ENST00000487401 CFAP221Q4G0U5 840 aa13.33□□□□□ -0.28
SREBF1-215ENST00000487401 TMEM150AQ86TG1 271 aa13.33□□□□□ -0.28
SREBF1-215ENST00000487401 SPEM1Q8N4L4 309 aa13.33□□□□□ -0.28
SREBF1-215ENST00000487401 SUMF1Q8NBK3 374 aa13.33□□□□□ -0.28
SREBF1-215ENST00000487401 STKLD1Q8NE28 680 aa13.33□□□□□ -0.28
SREBF1-215ENST00000487401 GOLGA5Q8TBA6 731 aa13.33□□□□□ -0.28
SREBF1-215ENST00000487401 USP13Q92995 863 aaPredicted RBP13.33□□□□□ -0.28
SREBF1-215ENST00000487401 FUBP3Q96I24 572 aaKnown RBP eCLIP13.33□□□□□ -0.28
SREBF1-215ENST00000487401 PKMYT1Q99640 499 aa13.33□□□□□ -0.28
SREBF1-215ENST00000487401 KIF9Q9HAQ2 790 aa13.33□□□□□ -0.28
SREBF1-215ENST00000487401 TRPC7Q9HCX4 862 aa13.33□□□□□ -0.28
SREBF1-215ENST00000487401 TDP1Q9NUW8 608 aa13.33□□□□□ -0.28
SREBF1-215ENST00000487401 RCOR1Q9UKL0 485 aa13.33□□□□□ -0.28
SREBF1-215ENST00000487401 DOCK8Q8NF50 2099 aa13.33□□□□□ -0.28
SREBF1-215ENST00000487401 PTPRJQ12913 1337 aa13.33□□□□□ -0.28
SREBF1-215ENST00000487401 HCRTO43612 131 aa13.32□□□□□ -0.28
SREBF1-215ENST00000487401 EXOC3O60645 756 aa13.32□□□□□ -0.28
SREBF1-215ENST00000487401 ATP2C2O75185 946 aa13.32□□□□□ -0.28
SREBF1-215ENST00000487401 SLFN14P0C7P3 912 aa13.32□□□□□ -0.28
SREBF1-215ENST00000487401 WARSP23381 471 aaKnown RBP13.32□□□□□ -0.28
SREBF1-215ENST00000487401 LMO2P25791 158 aa13.32□□□□□ -0.28
SREBF1-215ENST00000487401 GNL1P36915 607 aaPredicted RBP13.32□□□□□ -0.28
SREBF1-215ENST00000487401 GRIK1P39086 918 aa13.32□□□□□ -0.28
SREBF1-215ENST00000487401 MAGEA11P43364 429 aa13.32□□□□□ -0.28
SREBF1-215ENST00000487401 PSMC1P62191 440 aaKnown RBP13.32□□□□□ -0.28
SREBF1-215ENST00000487401 TNNC1P63316 161 aa13.32□□□□□ -0.28
SREBF1-215ENST00000487401 AMPD2Q01433 879 aa13.32□□□□□ -0.28
SREBF1-215ENST00000487401 DNM1Q05193 864 aaKnown RBP13.32□□□□□ -0.28
SREBF1-215ENST00000487401 CUL4BQ13620 913 aa13.32□□□□□ -0.28
SREBF1-215ENST00000487401 PON2Q15165 354 aa13.32□□□□□ -0.28
SREBF1-215ENST00000487401 KNOP1Q1ED39 458 aaKnown RBP13.32□□□□□ -0.28
SREBF1-215ENST00000487401 FAM171BQ6P995 826 aa13.32□□□□□ -0.28
SREBF1-215ENST00000487401 TXNDC11Q6PKC3 985 aa13.32□□□□□ -0.28
SREBF1-215ENST00000487401 LIMS2Q7Z4I7 341 aa13.32□□□□□ -0.28
SREBF1-215ENST00000487401 DCLK2Q8N568 766 aa13.32□□□□□ -0.28
SREBF1-215ENST00000487401 FSIP1Q8NA03 581 aa13.32□□□□□ -0.28
SREBF1-215ENST00000487401 KBTBD7Q8WVZ9 684 aa13.32□□□□□ -0.28
SREBF1-215ENST00000487401 NELL1Q92832 810 aa13.32□□□□□ -0.28
SREBF1-215ENST00000487401 TRMT2BQ96GJ1 504 aaKnown RBP13.32□□□□□ -0.28
SREBF1-215ENST00000487401 MYRFLQ96LU7 910 aa13.32□□□□□ -0.28
SREBF1-215ENST00000487401 CGRRF1Q99675 332 aa13.32□□□□□ -0.28
SREBF1-215ENST00000487401 RBM12Q9NTZ6 932 aaKnown RBP13.32□□□□□ -0.28
SREBF1-215ENST00000487401 SERTAD1Q9UHV2 236 aa13.32□□□□□ -0.28
SREBF1-215ENST00000487401 RAB23Q9ULC3 237 aa13.32□□□□□ -0.28
SREBF1-215ENST00000487401 SMG5Q9UPR3 1016 aaKnown RBP13.32□□□□□ -0.28
SREBF1-215ENST00000487401 CCL26Q9Y258 94 aa13.32□□□□□ -0.28
SREBF1-215ENST00000487401 VPS13AQ96RL7 3174 aa13.32□□□□□ -0.28
SREBF1-215ENST00000487401 PTPRZ1P23471 2315 aaPredicted RBP13.31□□□□□ -0.28
SREBF1-215ENST00000487401 TRAV19A0A0A6YYK7 116 aa13.31□□□□□ -0.28
SREBF1-215ENST00000487401 LILRB5O75023 590 aa13.31□□□□□ -0.28
SREBF1-215ENST00000487401 PHACTR2O75167 634 aa13.31□□□□□ -0.28
SREBF1-215ENST00000487401 CLSTN1O94985 981 aa13.31□□□□□ -0.28
SREBF1-215ENST00000487401 CST3P01034 146 aaPredicted RBP13.31□□□□□ -0.28
SREBF1-215ENST00000487401 FAM163BP0C2L3 166 aa13.31□□□□□ -0.28
SREBF1-215ENST00000487401 BDNFP23560 247 aa13.31□□□□□ -0.28
SREBF1-215ENST00000487401 ANXA13P27216 316 aa13.31□□□□□ -0.28
SREBF1-215ENST00000487401 FOXK2Q01167 660 aa13.31□□□□□ -0.28
SREBF1-215ENST00000487401 SATB1Q01826 763 aa13.31□□□□□ -0.28
SREBF1-215ENST00000487401 CYP27A1Q02318 531 aa13.31□□□□□ -0.28
SREBF1-215ENST00000487401 EHHADHQ08426 723 aa13.31□□□□□ -0.28
SREBF1-215ENST00000487401 RUNX3Q13761 415 aa13.31□□□□□ -0.28
SREBF1-215ENST00000487401 PKP1Q13835 747 aa13.31□□□□□ -0.28
SREBF1-215ENST00000487401 ZNF268Q14587 947 aaPredicted RBP13.31□□□□□ -0.28
SREBF1-215ENST00000487401 PDGFRLQ15198 375 aa13.31□□□□□ -0.28
SREBF1-215ENST00000487401 CCDC142Q17RM4 750 aa13.31□□□□□ -0.28
SREBF1-215ENST00000487401 BMT2Q1RMZ1 405 aa13.31□□□□□ -0.28
SREBF1-215ENST00000487401 VSTM1Q6UX27 236 aa13.31□□□□□ -0.28
SREBF1-215ENST00000487401 GRAMD1CQ8IYS0 662 aa13.31□□□□□ -0.28
SREBF1-215ENST00000487401 SYNPOQ8N3V7 929 aa13.31□□□□□ -0.28
SREBF1-215ENST00000487401 TTC16Q8NEE8 873 aa13.31□□□□□ -0.28
SREBF1-215ENST00000487401 OR6B3Q8NGW1 331 aa13.31□□□□□ -0.28
SREBF1-215ENST00000487401 MYLPFQ96A32 169 aa13.31□□□□□ -0.28
SREBF1-215ENST00000487401 PAGE5Q96GU1 130 aa13.31□□□□□ -0.28
SREBF1-215ENST00000487401 FAM83CQ9BQN1 747 aa13.31□□□□□ -0.28
SREBF1-215ENST00000487401 EPC1Q9H2F5 836 aa13.31□□□□□ -0.28
SREBF1-215ENST00000487401 EBF3Q9H4W6 596 aa13.31□□□□□ -0.28
SREBF1-215ENST00000487401 EXOC1Q9NV70 894 aa13.31□□□□□ -0.28
SREBF1-215ENST00000487401 CFAP54Q96N23 3096 aa13.31□□□□□ -0.28
SREBF1-215ENST00000487401 TACC1O75410 805 aa13.3□□□□□ -0.28
SREBF1-215ENST00000487401 CKMP06732 381 aa13.3□□□□□ -0.28
SREBF1-215ENST00000487401 USP17L7P0C7H9 530 aa13.3□□□□□ -0.28
SREBF1-215ENST00000487401 TDGF1P13385 188 aa13.3□□□□□ -0.28
SREBF1-215ENST00000487401 ATICP31939 592 aa13.3□□□□□ -0.28
SREBF1-215ENST00000487401 GRSF1Q12849 480 aaKnown RBP eCLIP13.3□□□□□ -0.28
SREBF1-215ENST00000487401 GAS6Q14393 721 aa13.3□□□□□ -0.28
SREBF1-215ENST00000487401 WDR72Q3MJ13 1102 aa13.3□□□□□ -0.28
SREBF1-215ENST00000487401 MDH1BQ5I0G3 518 aa13.3□□□□□ -0.28
SREBF1-215ENST00000487401 TRIM68Q6AZZ1 485 aa13.3□□□□□ -0.28
SREBF1-215ENST00000487401 C12orf56Q8IXR9 622 aa13.3□□□□□ -0.28
SREBF1-215ENST00000487401 GPR161Q8N6U8 529 aaKnown RBP13.3□□□□□ -0.28
SREBF1-215ENST00000487401 MYCBPAPQ8TBZ2 947 aa13.3□□□□□ -0.28
SREBF1-215ENST00000487401 EXOC4Q96A65 974 aa13.3□□□□□ -0.28
SREBF1-215ENST00000487401 SPATA17Q96L03 361 aa13.3□□□□□ -0.28
SREBF1-215ENST00000487401 CEP295NLQ96MC4 621 aa13.3□□□□□ -0.28
SREBF1-215ENST00000487401 CYP2S1Q96SQ9 504 aa13.3□□□□□ -0.28
SREBF1-215ENST00000487401 MRPL45Q9BRJ2 306 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms