RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 ZKSCAN5Q9Y2L8 839 aa5.9□□□□□ -1.46
SF1-217ENST00000486960 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.9□□□□□ -1.46
SF1-217ENST00000486960 ZNF521Q96K83 1311 aa5.9□□□□□ -1.47
SF1-217ENST00000486960 A0A1B0GUL6 1792 aa5.9□□□□□ -1.47
SF1-217ENST00000486960 LCHNA4D1U4 455 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 CAPN8A6NHC0 703 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 LRRC72A6NJI9 287 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 NT5C1B-RDH14C9J2C7 533 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 AP3D1O14617 1153 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 TSPAN9O75954 239 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 FGF18O76093 207 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 LETM1O95202 739 aaPredicted RBP5.89□□□□□ -1.47
SF1-217ENST00000486960 ATE1O95260 518 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 HMGCRP04035 888 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 CYP1A2P05177 515 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 TPM1P09493 284 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 SNRPA1P09661 255 aaKnown RBP5.89□□□□□ -1.47
SF1-217ENST00000486960 CKBP12277 381 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 ITGA6P23229 1130 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 SOX6P35712 828 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 HSD17B2P37059 387 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 TMPOP42166 694 aaKnown RBP5.89□□□□□ -1.47
SF1-217ENST00000486960 CTAG1AP78358 180 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 COG7P83436 770 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 FOXO1Q12778 655 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 KIF5AQ12840 1032 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 COASYQ13057 564 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 LRRC32Q14392 662 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 SSPNQ14714 243 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 TEAD4Q15561 434 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 MAP3K21Q5TCX8 1036 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 RASIP1Q5U651 963 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 SUSD4Q5VX71 490 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 TPGS2Q68CL5 300 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 MCTP2Q6DN12 878 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 PPP1R21Q6ZMI0 780 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 UNC5AQ6ZN44 842 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 BMP8AQ7Z5Y6 402 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 FRMD5Q7Z6J6 570 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 RAB11FIP4Q86YS3 637 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 APOBEC3FQ8IUX4 373 aaKnown RBP5.89□□□□□ -1.47
SF1-217ENST00000486960 C10orf53Q8N6V4 93 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 BBOF1Q8ND07 529 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 AGBL5Q8NDL9 886 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 RFWD2Q8NHY2 731 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 TEKT4Q8WW24 435 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 PMEPA1Q969W9 287 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 TUBGCP3Q96CW5 907 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 TMEM169Q96HH4 297 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 SCLYQ96I15 445 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 FEM1CQ96JP0 617 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 UNKQ9C0B0 810 aaKnown RBP5.89□□□□□ -1.47
SF1-217ENST00000486960 THAP9Q9H5L6 903 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 ETNK1Q9HBU6 452 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 CYP4F12Q9HCS2 524 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 USP40Q9NVE5 1235 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 DZANK1Q9NVP4 752 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 PPP1R14DQ9NXH3 145 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 TOR4AQ9NXH8 423 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 IL20Q9NYY1 176 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 MUTYHQ9UIF7 546 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 PCDHGB4Q9UN71 923 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 FBN3Q75N90 2809 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 ZBED9Q6R2W3 1325 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 SPTAN1Q13813 2472 aaKnown RBP5.89□□□□□ -1.47
SF1-217ENST00000486960 ATG2AQ2TAZ0 1938 aa5.89□□□□□ -1.47
SF1-217ENST00000486960 FBN2P35556 2912 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 TCRBV16S1A1N1A0A5B0 115 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 K7EPI3 171 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 MEN1O00255 615 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 PDHXO00330 501 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 EML1O00423 815 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 EREGO14944 169 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 CETN3O15182 167 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 B3GALT2O43825 422 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 SMPD2O60906 423 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 PTP4A3O75365 173 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 ZNF254O75437 659 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 TMEM63AO94886 807 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 UBXN7O94888 489 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 KCNH1O95259 989 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 TRIM16O95361 564 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 PGM3O95394 542 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 GSNP06396 782 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 ADRB1P08588 477 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 C6orf222P0C671 652 aaPredicted RBP5.88□□□□□ -1.47
SF1-217ENST00000486960 TMIGD3P0DMS9 266 aaPredicted RBP5.88□□□□□ -1.47
SF1-217ENST00000486960 ZSCAN22P10073 491 aaPredicted RBP5.88□□□□□ -1.47
SF1-217ENST00000486960 CYP2C8P10632 490 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 PDHBP11177 359 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 HNRNPLP14866 589 aaKnown RBP eCLIP5.88□□□□□ -1.47
SF1-217ENST00000486960 MYOGP15173 224 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 SFPQP23246 707 aaKnown RBP eCLIP5.88□□□□□ -1.47
SF1-217ENST00000486960 KELP23276 732 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 RGS2P41220 211 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 ALDH9A1P49189 494 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 ZNF143P52747 638 aaPredicted RBP5.88□□□□□ -1.47
SF1-217ENST00000486960 VAMP2P63027 116 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 NUCB2P80303 420 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 HTD2P86397 168 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms