RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 CHKBQ9Y259 395 aa4.97□□□□□ -1.61
SMARCC1-206ENST00000485737 FRMD4BQ9Y2L6 1034 aa4.97□□□□□ -1.61
SMARCC1-206ENST00000485737 LRCH1Q9Y2L9 728 aa4.97□□□□□ -1.61
SMARCC1-206ENST00000485737 SUGT1Q9Y2Z0 365 aa4.97□□□□□ -1.61
SMARCC1-206ENST00000485737 IGLV3-22A0A075B6J6 115 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 SIGLEC16A6NMB1 481 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 FAM86B1E9PN63 330 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 PDLIM1O00151 329 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 FOXN3O00409 490 aaPredicted RBP4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 MEIS1O00470 390 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 NDC80O14777 642 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 CLIC2O15247 247 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 MSH4O15457 936 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 SPOPO43791 374 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 ICMTO60725 284 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 EDF1O60869 148 aaKnown RBP4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 ZBED4O75132 1171 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 ACSL3O95573 720 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 IL1BP01584 269 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 GSTA2P09210 222 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 FAM86B2P0C5J1 330 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 TRIM49P0CI25 452 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 TRIM49CP0CI26 452 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 T-ENOLP0DO92 83 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 CETPP11597 493 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 GM2AP17900 193 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 ITGB7P26010 798 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 ALDH3A1P30838 453 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 CD68P34810 354 aaPredicted RBP4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 SLC1A1P43005 524 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 RASSF2P50749 326 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 ITGA8P53708 1063 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 SNRPFP62306 86 aaKnown RBP4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 FMO1Q01740 532 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 CDR2Q01850 454 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 RNASELQ05823 741 aaKnown RBP4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 KLC1Q07866 573 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 KCNA1Q09470 495 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 CETN1Q12798 172 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 KLF1Q13351 362 aaPredicted RBP4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 PPP2R5CQ13362 524 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 SPARCL1Q14515 664 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 PDCD2Q16342 344 aaPredicted RBP4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 DDB1Q16531 1140 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 CLEC16AQ2KHT3 1053 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 SLC5A9Q2M3M2 681 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 ZC3H12AQ5D1E8 599 aaKnown RBP4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 PRSS36Q5K4E3 855 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 TTBK2Q6IQ55 1244 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 USP17L6PQ6QN14 398 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 B3GNT9Q6UX72 402 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 ACAD11Q709F0 780 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 OTUD6AQ7L8S5 288 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 ZNF720Q7Z2F6 126 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 ADAT2Q7Z6V5 191 aaKnown RBP4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 NOP9Q86U38 636 aaKnown RBP4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 TRABD2AQ86V40 505 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 SESTD1Q86VW0 696 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 ARHGEF19Q8IW93 802 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 RPUSD2Q8IZ73 545 aaKnown RBP4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 GALNT15Q8N3T1 639 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 ZCCHC9Q8N567 271 aaKnown RBP4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 ANKRD42Q8N9B4 389 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 CNBD1Q8NA66 436 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 MARCH10Q8NA82 808 aaPredicted RBP4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 UHMK1Q8TAS1 419 aaKnown RBP4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 SHC3Q92529 594 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 SLC5A5Q92911 643 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 MKL1Q969V6 931 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 SLC7A6OSQ96CW6 309 aaPredicted RBP4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 ERP27Q96DN0 273 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 ZNF333Q96JL9 665 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 FAM81BQ96LP2 452 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 CCDC17Q96LX7 622 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 TTC25Q96NG3 672 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 LRRC37BQ96QE4 947 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 NUDCD1Q96RS6 583 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 SETDB2Q96T68 719 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 PCDHB18PQ96TA0 734 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 P2RX7Q99572 595 aaKnown RBP4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 OSMRQ99650 979 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 EIF2AK1Q9BQI3 630 aaKnown RBP4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 CCDC77Q9BR77 488 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 TIPINQ9BVW5 301 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 NUP85Q9BW27 656 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 DCLK3Q9C098 648 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 CCDC113Q9H0I3 377 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 MMADHCQ9H3L0 296 aaPredicted RBP4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 ST6GALNAC4Q9H4F1 302 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 CD209Q9NNX6 404 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 DZANK1Q9NVP4 752 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 STOML1Q9UBI4 398 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 NKX1-2Q9UD57 310 aaPredicted RBP4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 ASIC3Q9UHC3 531 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 EGFL7Q9UHF1 273 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 SERPINB13Q9UIV8 391 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 GGT7Q9UJ14 662 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 SYNPO2Q9UMS6 1093 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 NAALADL1Q9UQQ1 740 aa4.96□□□□□ -1.62
SMARCC1-206ENST00000485737 STK38LQ9Y2H1 464 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms