RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 CMASQ8NFW8 434 aaPredicted RBP21.18■□□□□ 0.98
COL6A2-208ENST00000485591 HLA-CQ95604 372 aa21.18■□□□□ 0.98
COL6A2-208ENST00000485591 MSLNLQ96KJ4 702 aa21.18■□□□□ 0.98
COL6A2-208ENST00000485591 XPO4Q9C0E2 1151 aaKnown RBP21.18■□□□□ 0.98
COL6A2-208ENST00000485591 COG5Q9UP83 839 aa21.18■□□□□ 0.98
COL6A2-208ENST00000485591 YIPF1Q9Y548 306 aa21.18■□□□□ 0.98
COL6A2-208ENST00000485591 REV3LO60673 3130 aa21.18■□□□□ 0.98
COL6A2-208ENST00000485591 CBFA2T2O43439 604 aa21.17■□□□□ 0.98
COL6A2-208ENST00000485591 HNRNPA1P09651 372 aaKnown RBP eCLIP21.17■□□□□ 0.98
COL6A2-208ENST00000485591 HAPLN1P10915 354 aaPredicted RBP21.17■□□□□ 0.98
COL6A2-208ENST00000485591 PBX1P40424 430 aa21.17■□□□□ 0.98
COL6A2-208ENST00000485591 MAGEA11P43364 429 aa21.17■□□□□ 0.98
COL6A2-208ENST00000485591 TUFMP49411 452 aaKnown RBP21.17■□□□□ 0.98
COL6A2-208ENST00000485591 SYCE2Q6PIF2 218 aa21.17■□□□□ 0.98
COL6A2-208ENST00000485591 SARM1Q6SZW1 724 aa21.17■□□□□ 0.98
COL6A2-208ENST00000485591 FUKQ8N0W3 1084 aa21.17■□□□□ 0.98
COL6A2-208ENST00000485591 C12orf29Q8N999 325 aa21.17■□□□□ 0.98
COL6A2-208ENST00000485591 HEXIM2Q96MH2 286 aaKnown RBP21.17■□□□□ 0.98
COL6A2-208ENST00000485591 B3GNT5Q9BYG0 378 aa21.17■□□□□ 0.98
COL6A2-208ENST00000485591 FAM49BQ9NUQ9 324 aa21.17■□□□□ 0.98
COL6A2-208ENST00000485591 SLC27A5Q9Y2P5 690 aa21.17■□□□□ 0.98
COL6A2-208ENST00000485591 ATP8B3O60423 1300 aa21.17■□□□□ 0.98
COL6A2-208ENST00000485591 BRWD1Q9NSI6 2320 aa21.16■□□□□ 0.98
COL6A2-208ENST00000485591 GREB1Q4ZG55 1949 aa21.16■□□□□ 0.98
COL6A2-208ENST00000485591 RNF225M0QZC1 329 aaPredicted RBP21.16■□□□□ 0.98
COL6A2-208ENST00000485591 RFPL2O75678 378 aa21.16■□□□□ 0.98
COL6A2-208ENST00000485591 POU2F2P09086 479 aa21.16■□□□□ 0.98
COL6A2-208ENST00000485591 KRT5P13647 590 aa21.16■□□□□ 0.98
COL6A2-208ENST00000485591 CCDC130P13994 396 aa21.16■□□□□ 0.98
COL6A2-208ENST00000485591 CDR1P51861 262 aa21.16■□□□□ 0.98
COL6A2-208ENST00000485591 POLR2FP61218 127 aaKnown RBP21.16■□□□□ 0.98
COL6A2-208ENST00000485591 PLD1Q13393 1074 aa21.16■□□□□ 0.98
COL6A2-208ENST00000485591 RAPGEF1Q13905 1077 aa21.16■□□□□ 0.98
COL6A2-208ENST00000485591 DRAP1Q14919 205 aaPredicted RBP21.16■□□□□ 0.98
COL6A2-208ENST00000485591 PTPN21Q16825 1174 aa21.16■□□□□ 0.98
COL6A2-208ENST00000485591 MGAT5BQ3V5L5 792 aa21.16■□□□□ 0.98
COL6A2-208ENST00000485591 ARHGAP17Q68EM7 881 aa21.16■□□□□ 0.98
COL6A2-208ENST00000485591 VSTM1Q6UX27 236 aa21.16■□□□□ 0.98
COL6A2-208ENST00000485591 FAM35AQ86V20 835 aa21.16■□□□□ 0.98
COL6A2-208ENST00000485591 CYFIP2Q96F07 1278 aa21.16■□□□□ 0.98
COL6A2-208ENST00000485591 SEPT5Q99719 369 aaPredicted RBP21.16■□□□□ 0.98
COL6A2-208ENST00000485591 STK33Q9BYT3 514 aa21.16■□□□□ 0.98
COL6A2-208ENST00000485591 RHOBTB2Q9BYZ6 727 aa21.16■□□□□ 0.98
COL6A2-208ENST00000485591 ZNF518BQ9C0D4 1074 aa21.16■□□□□ 0.98
COL6A2-208ENST00000485591 GPR88Q9GZN0 384 aa21.16■□□□□ 0.98
COL6A2-208ENST00000485591 KIAA1257Q9ULG3 409 aa21.16■□□□□ 0.98
COL6A2-208ENST00000485591 DENND4AQ7Z401 1863 aa21.15■□□□□ 0.98
COL6A2-208ENST00000485591 F8VZ95 297 aa21.15■□□□□ 0.98
COL6A2-208ENST00000485591 LRG1P02750 347 aa21.15■□□□□ 0.98
COL6A2-208ENST00000485591 VDRP11473 427 aa21.15■□□□□ 0.98
COL6A2-208ENST00000485591 KCNA5P22460 613 aa21.15■□□□□ 0.98
COL6A2-208ENST00000485591 BDNFP23560 247 aa21.15■□□□□ 0.98
COL6A2-208ENST00000485591 CYP2F1P24903 491 aa21.15■□□□□ 0.98
COL6A2-208ENST00000485591 SGO2Q562F6 1265 aa21.15■□□□□ 0.98
COL6A2-208ENST00000485591 PAQR9Q6ZVX9 377 aa21.15■□□□□ 0.98
COL6A2-208ENST00000485591 C12orf76Q8N812 135 aaPredicted RBP21.15■□□□□ 0.98
COL6A2-208ENST00000485591 SLC2A14Q8TDB8 520 aa21.15■□□□□ 0.98
COL6A2-208ENST00000485591 SMARCD1Q96GM5 515 aa21.15■□□□□ 0.98
COL6A2-208ENST00000485591 HNRNPABQ99729 332 aaKnown RBP21.15■□□□□ 0.98
COL6A2-208ENST00000485591 MED10Q9BTT4 135 aa21.15■□□□□ 0.98
COL6A2-208ENST00000485591 PRKD2Q9BZL6 878 aa21.15■□□□□ 0.98
COL6A2-208ENST00000485591 CEP72Q9P209 647 aa21.15■□□□□ 0.98
COL6A2-208ENST00000485591 CD207Q9UJ71 328 aa21.15■□□□□ 0.98
COL6A2-208ENST00000485591 CCDC195A0A1B0GUA6 201 aa21.14■□□□□ 0.97
COL6A2-208ENST00000485591 FOXN3O00409 490 aaPredicted RBP21.14■□□□□ 0.97
COL6A2-208ENST00000485591 CLDN5O00501 218 aa21.14■□□□□ 0.97
COL6A2-208ENST00000485591 ATF6P18850 670 aa21.14■□□□□ 0.97
COL6A2-208ENST00000485591 ALDH1A3P47895 512 aa21.14■□□□□ 0.97
COL6A2-208ENST00000485591 JAM2P57087 298 aa21.14■□□□□ 0.97
COL6A2-208ENST00000485591 RPL10AP62906 217 aaKnown RBP21.14■□□□□ 0.97
COL6A2-208ENST00000485591 ITIH3Q06033 890 aa21.14■□□□□ 0.97
COL6A2-208ENST00000485591 TWF1Q12792 350 aa21.14■□□□□ 0.97
COL6A2-208ENST00000485591 RARS2Q5T160 578 aaKnown RBP21.14■□□□□ 0.97
COL6A2-208ENST00000485591 PPP1R26Q5T8A7 1209 aaPredicted RBP21.14■□□□□ 0.97
COL6A2-208ENST00000485591 CYP26C1Q6V0L0 522 aa21.14■□□□□ 0.97
COL6A2-208ENST00000485591 FAM71AQ8IYT1 594 aa21.14■□□□□ 0.97
COL6A2-208ENST00000485591 SMRP1Q8NCR6 262 aa21.14■□□□□ 0.97
COL6A2-208ENST00000485591 ZNF707Q96C28 371 aaPredicted RBP21.14■□□□□ 0.97
COL6A2-208ENST00000485591 S1PR5Q9H228 398 aa21.14■□□□□ 0.97
COL6A2-208ENST00000485591 NLRC4Q9NPP4 1024 aa21.14■□□□□ 0.97
COL6A2-208ENST00000485591 KRT82Q9NSB4 513 aa21.14■□□□□ 0.97
COL6A2-208ENST00000485591 H3BQ06 376 aaPredicted RBP21.13■□□□□ 0.97
COL6A2-208ENST00000485591 XYLBO75191 536 aa21.13■□□□□ 0.97
COL6A2-208ENST00000485591 SOAT2O75908 522 aa21.13■□□□□ 0.97
COL6A2-208ENST00000485591 PNMA6AP0CW24 399 aaPredicted RBP21.13■□□□□ 0.97
COL6A2-208ENST00000485591 CD19P15391 556 aa21.13■□□□□ 0.97
COL6A2-208ENST00000485591 ADORA2BP29275 332 aa21.13■□□□□ 0.97
COL6A2-208ENST00000485591 USP8P40818 1118 aa21.13■□□□□ 0.97
COL6A2-208ENST00000485591 FIGNQ5HY92 759 aa21.13■□□□□ 0.97
COL6A2-208ENST00000485591 TMC5Q6UXY8 1006 aa21.13■□□□□ 0.97
COL6A2-208ENST00000485591 GPR149Q86SP6 731 aa21.13■□□□□ 0.97
COL6A2-208ENST00000485591 CEP295NLQ96MC4 621 aa21.13■□□□□ 0.97
COL6A2-208ENST00000485591 SPAG5Q96R06 1193 aa21.13■□□□□ 0.97
COL6A2-208ENST00000485591 ADAM7Q9H2U9 754 aa21.13■□□□□ 0.97
COL6A2-208ENST00000485591 ITIH6Q6UXX5 1313 aa21.12■□□□□ 0.97
COL6A2-208ENST00000485591 O00370 1275 aa21.12■□□□□ 0.97
COL6A2-208ENST00000485591 TRIM66O15016 1216 aa21.12■□□□□ 0.97
COL6A2-208ENST00000485591 CCL16O15467 120 aa21.12■□□□□ 0.97
COL6A2-208ENST00000485591 AP5Z1O43299 807 aa21.12■□□□□ 0.97
COL6A2-208ENST00000485591 EPHB3P54753 998 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms