RNA–Protein interactions for RNA: ENST00000482499.1

CMC1-210, Transcript of C-X9-C motif containing 1, human

TSL 2

Gene CMC1, Length 446 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CMC1-210	ENST00000482499	SH2D3A	Q9BRG2	576 aa		4.99	□□□□□ -1.61
CMC1-210	ENST00000482499	QTRT1	Q9BXR0	403 aa	Known RBP	4.99	□□□□□ -1.61
CMC1-210	ENST00000482499	B3GNT5	Q9BYG0	378 aa		4.99	□□□□□ -1.61
CMC1-210	ENST00000482499	IMPG2	Q9BZV3	1241 aa		4.99	□□□□□ -1.61
CMC1-210	ENST00000482499	ZNF700	Q9H0M5	742 aa		4.99	□□□□□ -1.61
CMC1-210	ENST00000482499	TMEM60	Q9H2L4	133 aa		4.99	□□□□□ -1.61
CMC1-210	ENST00000482499	DDX21	Q9NR30	783 aa	Known RBP eCLIP	4.99	□□□□□ -1.61
CMC1-210	ENST00000482499	CHST12	Q9NRB3	414 aa		4.99	□□□□□ -1.61
CMC1-210	ENST00000482499	SLC16A6	O15403	523 aa		4.98	□□□□□ -1.61
CMC1-210	ENST00000482499	SGTA	O43765	313 aa		4.98	□□□□□ -1.61
CMC1-210	ENST00000482499	HRG	P04196	525 aa		4.98	□□□□□ -1.61
CMC1-210	ENST00000482499	NHLRC4	P0CG21	123 aa	Predicted RBP	4.98	□□□□□ -1.61
CMC1-210	ENST00000482499	MTHFD1	P11586	935 aa	Known RBP	4.98	□□□□□ -1.61
CMC1-210	ENST00000482499	PHKG2	P15735	406 aa		4.98	□□□□□ -1.61
CMC1-210	ENST00000482499	CCT8	P50990	548 aa		4.98	□□□□□ -1.61
CMC1-210	ENST00000482499	NEK3	P51956	506 aa		4.98	□□□□□ -1.61
CMC1-210	ENST00000482499	FAM193A	P78312	1265 aa		4.98	□□□□□ -1.61
CMC1-210	ENST00000482499	DSC2	Q02487	901 aa		4.98	□□□□□ -1.61
CMC1-210	ENST00000482499	FHL1	Q13642	323 aa		4.98	□□□□□ -1.61
CMC1-210	ENST00000482499	HLX	Q14774	488 aa	Predicted RBP	4.98	□□□□□ -1.61
CMC1-210	ENST00000482499	SLC44A4	Q53GD3	710 aa		4.98	□□□□□ -1.61
CMC1-210	ENST00000482499	MORN5	Q5VZ52	161 aa		4.98	□□□□□ -1.61
CMC1-210	ENST00000482499	CYB5RL	Q6IPT4	315 aa		4.98	□□□□□ -1.61
CMC1-210	ENST00000482499	RSPH3	Q86UC2	560 aa		4.98	□□□□□ -1.61
CMC1-210	ENST00000482499	FAM156A	Q8NDB6	213 aa		4.98	□□□□□ -1.61
CMC1-210	ENST00000482499	NSUN6	Q8TEA1	469 aa	Known RBP	4.98	□□□□□ -1.61
CMC1-210	ENST00000482499	TMX3	Q96JJ7	454 aa		4.98	□□□□□ -1.61
CMC1-210	ENST00000482499	PBK	Q96KB5	322 aa		4.98	□□□□□ -1.61
CMC1-210	ENST00000482499	NRIP3	Q9NQ35	241 aa		4.98	□□□□□ -1.61
CMC1-210	ENST00000482499	JKAMP	Q9P055	326 aa		4.98	□□□□□ -1.61
CMC1-210	ENST00000482499	COMMD10	Q9Y6G5	202 aa		4.98	□□□□□ -1.61
CMC1-210	ENST00000482499	CAPN8	A6NHC0	703 aa		4.97	□□□□□ -1.61
CMC1-210	ENST00000482499	PMM2	O15305	246 aa		4.97	□□□□□ -1.61
CMC1-210	ENST00000482499	NTN1	O95631	604 aa		4.97	□□□□□ -1.61
CMC1-210	ENST00000482499	EBLN1	P0CF75	366 aa		4.97	□□□□□ -1.61
CMC1-210	ENST00000482499	NPTX2	P47972	431 aa		4.97	□□□□□ -1.61
CMC1-210	ENST00000482499	MAP2K6	P52564	334 aa		4.97	□□□□□ -1.61
CMC1-210	ENST00000482499	ZNF280A	P59817	542 aa	Predicted RBP	4.97	□□□□□ -1.61
CMC1-210	ENST00000482499	CDC42EP1	Q00587	391 aa		4.97	□□□□□ -1.61
CMC1-210	ENST00000482499	KIAA0753	Q2KHM9	967 aa		4.97	□□□□□ -1.61
CMC1-210	ENST00000482499	SUPT20HL1	Q3ZLR7	823 aa		4.97	□□□□□ -1.61
CMC1-210	ENST00000482499	ANO6	Q4KMQ2	910 aa		4.97	□□□□□ -1.61
CMC1-210	ENST00000482499	SLC9A4	Q6AI14	798 aa		4.97	□□□□□ -1.61
CMC1-210	ENST00000482499	TAPT1	Q6NXT6	567 aa		4.97	□□□□□ -1.61
CMC1-210	ENST00000482499	DARS2	Q6PI48	645 aa	Known RBP	4.97	□□□□□ -1.61
CMC1-210	ENST00000482499	NPNT	Q6UXI9	565 aa		4.97	□□□□□ -1.61
CMC1-210	ENST00000482499	GADL1	Q6ZQY3	521 aa		4.97	□□□□□ -1.61
CMC1-210	ENST00000482499	SLC17A8	Q8NDX2	589 aa		4.97	□□□□□ -1.61
CMC1-210	ENST00000482499	IL17RD	Q8NFM7	739 aa		4.97	□□□□□ -1.61
CMC1-210	ENST00000482499	KLHDC4	Q8TBB5	520 aa		4.97	□□□□□ -1.61
CMC1-210	ENST00000482499	MTFMT	Q96DP5	389 aa	Known RBP	4.97	□□□□□ -1.61
CMC1-210	ENST00000482499	CDK5RAP3	Q96JB5	506 aa		4.97	□□□□□ -1.61
CMC1-210	ENST00000482499	CLPTM1L	Q96KA5	538 aa		4.97	□□□□□ -1.61
CMC1-210	ENST00000482499	WAC	Q9BTA9	647 aa		4.97	□□□□□ -1.61
CMC1-210	ENST00000482499	SEMA4C	Q9C0C4	833 aa		4.97	□□□□□ -1.61
CMC1-210	ENST00000482499	DKK3	Q9UBP4	350 aa		4.97	□□□□□ -1.61
CMC1-210	ENST00000482499	POLH	Q9Y253	713 aa		4.97	□□□□□ -1.61
CMC1-210	ENST00000482499	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	4.97	□□□□□ -1.61
CMC1-210	ENST00000482499	PCDHB1	Q9Y5F3	818 aa		4.97	□□□□□ -1.61
CMC1-210	ENST00000482499	LRRC14B	A6NHZ5	514 aa		4.96	□□□□□ -1.62
CMC1-210	ENST00000482499	GOLIM4	O00461	696 aa		4.96	□□□□□ -1.62
CMC1-210	ENST00000482499	SLC43A1	O75387	559 aa		4.96	□□□□□ -1.62
CMC1-210	ENST00000482499	CYP2D6	P10635	497 aa		4.96	□□□□□ -1.62
CMC1-210	ENST00000482499	CACNB3	P54284	484 aa		4.96	□□□□□ -1.62
CMC1-210	ENST00000482499	NOG	Q13253	232 aa		4.96	□□□□□ -1.62
CMC1-210	ENST00000482499	PROSER3	Q2NL68	480 aa		4.96	□□□□□ -1.62
CMC1-210	ENST00000482499	CEP78	Q5JTW2	689 aa		4.96	□□□□□ -1.62
CMC1-210	ENST00000482499	SLC18B1	Q6NT16	456 aa		4.96	□□□□□ -1.62
CMC1-210	ENST00000482499	CRELD2	Q6UXH1	353 aa	Predicted RBP	4.96	□□□□□ -1.62
CMC1-210	ENST00000482499	ZNF365	Q70YC5	407 aa		4.96	□□□□□ -1.62
CMC1-210	ENST00000482499	TECPR1	Q7Z6L1	1165 aa		4.96	□□□□□ -1.62
CMC1-210	ENST00000482499	C11orf96	Q7Z7L8	435 aa		4.96	□□□□□ -1.62
CMC1-210	ENST00000482499	KIAA0319L	Q8IZA0	1049 aa		4.96	□□□□□ -1.62
CMC1-210	ENST00000482499	FAM9A	Q8IZU1	332 aa	Predicted RBP	4.96	□□□□□ -1.62
CMC1-210	ENST00000482499	C3orf20	Q8ND61	904 aa		4.96	□□□□□ -1.62
CMC1-210	ENST00000482499	IFI44	Q8TCB0	444 aa		4.96	□□□□□ -1.62
CMC1-210	ENST00000482499	MORC4	Q8TE76	937 aa		4.96	□□□□□ -1.62
CMC1-210	ENST00000482499	DENND1A	Q8TEH3	1009 aa		4.96	□□□□□ -1.62
CMC1-210	ENST00000482499	TRIB1	Q96RU8	372 aa		4.96	□□□□□ -1.62
CMC1-210	ENST00000482499	LMBRD1	Q9NUN5	540 aa		4.96	□□□□□ -1.62
CMC1-210	ENST00000482499	TBC1D30	Q9Y2I9	924 aa		4.96	□□□□□ -1.62
CMC1-210	ENST00000482499		A0A0B4J269	797 aa		4.95	□□□□□ -1.62
CMC1-210	ENST00000482499		E7ENX8	843 aa		4.95	□□□□□ -1.62
CMC1-210	ENST00000482499		E9PLN8	166 aa		4.95	□□□□□ -1.62
CMC1-210	ENST00000482499	MGEA5	O60502	916 aa		4.95	□□□□□ -1.62
CMC1-210	ENST00000482499	PQBP1	O60828	265 aa	Known RBP	4.95	□□□□□ -1.62
CMC1-210	ENST00000482499	ARIH2	O95376	493 aa		4.95	□□□□□ -1.62
CMC1-210	ENST00000482499	SFPQ	P23246	707 aa	Known RBP eCLIP	4.95	□□□□□ -1.62
CMC1-210	ENST00000482499	PCSK6	P29122	969 aa		4.95	□□□□□ -1.62
CMC1-210	ENST00000482499	AGFG1	P52594	562 aa	Known RBP	4.95	□□□□□ -1.62
CMC1-210	ENST00000482499	HK3	P52790	923 aa		4.95	□□□□□ -1.62
CMC1-210	ENST00000482499	TAP2	Q03519	686 aa		4.95	□□□□□ -1.62
CMC1-210	ENST00000482499	PIGF	Q07326	219 aa		4.95	□□□□□ -1.62
CMC1-210	ENST00000482499	TUBB3	Q13509	450 aa		4.95	□□□□□ -1.62
CMC1-210	ENST00000482499	RAB39A	Q14964	217 aa		4.95	□□□□□ -1.62
CMC1-210	ENST00000482499	CNN3	Q15417	329 aa	Known RBP	4.95	□□□□□ -1.62
CMC1-210	ENST00000482499	KLHL22	Q53GT1	634 aa		4.95	□□□□□ -1.62
CMC1-210	ENST00000482499	GORAB	Q5T7V8	394 aa		4.95	□□□□□ -1.62
CMC1-210	ENST00000482499	AWAT2	Q6E213	333 aa		4.95	□□□□□ -1.62
CMC1-210	ENST00000482499	SLC2A7	Q6PXP3	512 aa		4.95	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms