RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 SLC8A2Q9UPR5 921 aa7.62□□□□□ -1.19
COL17A1-205ENST00000480127 C2CD2Q9Y426 696 aa7.62□□□□□ -1.19
COL17A1-205ENST00000480127 PCDHB5Q9Y5E4 795 aa7.62□□□□□ -1.19
COL17A1-205ENST00000480127 SRPRBQ9Y5M8 271 aaKnown RBP7.62□□□□□ -1.19
COL17A1-205ENST00000480127 CEP295Q9C0D2 2601 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 C4orf47A7E2U8 309 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 KPNA7A9QM74 516 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 TISP43B9A030 160 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 ANKRD63C9JTQ0 380 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 K7ELQ4 463 aaPredicted RBP7.61□□□□□ -1.19
COL17A1-205ENST00000480127 PPEF2O14830 753 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 DCLK1O15075 740 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 SPTLC2O15270 562 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 ATG13O75143 517 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 RNF40O75150 1001 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 PHACTR2O75167 634 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 TOP3BO95985 862 aaKnown RBP7.61□□□□□ -1.19
COL17A1-205ENST00000480127 EGFP01133 1207 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 PIGRP01833 764 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 ITGB3P05106 788 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 DLATP10515 647 aaKnown RBP7.61□□□□□ -1.19
COL17A1-205ENST00000480127 ATF6P18850 670 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 SPINK2P20155 84 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 ANXA13P27216 316 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 PCSK1P29120 753 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 ZNF131P52739 623 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 RPL10AP62906 217 aaKnown RBP7.61□□□□□ -1.19
COL17A1-205ENST00000480127 RBP5P82980 135 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 AMPD2Q01433 879 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 SMARCB1Q12824 385 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 GRSF1Q12849 480 aaKnown RBP eCLIP7.61□□□□□ -1.19
COL17A1-205ENST00000480127 FOXC1Q12948 553 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 RUNX3Q13761 415 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 NFE2Q16621 373 aaPredicted RBP7.61□□□□□ -1.19
COL17A1-205ENST00000480127 L1TD1Q5T7N2 865 aaKnown RBP7.61□□□□□ -1.19
COL17A1-205ENST00000480127 WSCD1Q658N2 575 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 TRIM68Q6AZZ1 485 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 FAM173BQ6P4H8 233 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 HS2ST1Q7LGA3 356 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 ZNF720Q7Z2F6 126 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 NT5DC4Q86YG4 428 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 CEP57L1Q8IYX8 460 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 SPRYD3Q8NCJ5 442 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 RIN3Q8TB24 985 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 SPPL2BQ8TCT7 592 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 DHX58Q96C10 678 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 HHIPQ96QV1 700 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 LPIN3Q9BQK8 851 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 PI4K2AQ9BTU6 479 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 EDEM2Q9BV94 578 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 HAPLN2Q9GZV7 340 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 TMEM206Q9H813 350 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 BLOC1S4Q9NUP1 217 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 FAM13BQ9NYF5 915 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 HSFX1Q9UBD0 423 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 UXTQ9UBK9 157 aaPredicted RBP7.61□□□□□ -1.19
COL17A1-205ENST00000480127 CPSF3Q9UKF6 684 aaKnown RBP7.61□□□□□ -1.19
COL17A1-205ENST00000480127 SNX9Q9Y5X1 595 aa7.61□□□□□ -1.19
COL17A1-205ENST00000480127 NUP210Q8TEM1 1887 aaPredicted RBP7.61□□□□□ -1.19
COL17A1-205ENST00000480127 FAM208BQ5VWN6 2430 aa7.6□□□□□ -1.19
COL17A1-205ENST00000480127 KIF26AQ9ULI4 1882 aaPredicted RBP7.6□□□□□ -1.19
COL17A1-205ENST00000480127 LNP1A1A4G5 178 aa7.6□□□□□ -1.19
COL17A1-205ENST00000480127 BCLAF3A2AJT9 711 aaKnown RBP7.6□□□□□ -1.19
COL17A1-205ENST00000480127 MYMKA6NI61 221 aa7.6□□□□□ -1.19
COL17A1-205ENST00000480127 ZNF233A6NK53 670 aa7.6□□□□□ -1.19
COL17A1-205ENST00000480127 CAVIN2O95810 425 aa7.6□□□□□ -1.19
COL17A1-205ENST00000480127 ABL1P00519 1130 aa7.6□□□□□ -1.19
COL17A1-205ENST00000480127 CKMP06732 381 aa7.6□□□□□ -1.19
COL17A1-205ENST00000480127 ARSAP15289 507 aa7.6□□□□□ -1.19
COL17A1-205ENST00000480127 TNNI1P19237 187 aa7.6□□□□□ -1.19
COL17A1-205ENST00000480127 TRIM21P19474 475 aaKnown RBP7.6□□□□□ -1.19
COL17A1-205ENST00000480127 GALK1P51570 392 aa7.6□□□□□ -1.19
COL17A1-205ENST00000480127 CYP2J2P51589 502 aa7.6□□□□□ -1.19
COL17A1-205ENST00000480127 CYP27A1Q02318 531 aa7.6□□□□□ -1.19
COL17A1-205ENST00000480127 CREB5Q02930 508 aa7.6□□□□□ -1.19
COL17A1-205ENST00000480127 ZNF252P-AS1Q0IIN9 211 aa7.6□□□□□ -1.19
COL17A1-205ENST00000480127 RESTQ13127 1097 aa7.6□□□□□ -1.19
COL17A1-205ENST00000480127 PSMD2Q13200 908 aa7.6□□□□□ -1.19
COL17A1-205ENST00000480127 TRPC3Q13507 836 aa7.6□□□□□ -1.19
COL17A1-205ENST00000480127 KCNB1Q14721 858 aa7.6□□□□□ -1.19
COL17A1-205ENST00000480127 SH3PXD2AQ5TCZ1 1133 aa7.6□□□□□ -1.19
COL17A1-205ENST00000480127 NAIF1Q69YI7 327 aaPredicted RBP7.6□□□□□ -1.19
COL17A1-205ENST00000480127 C4orf50Q6ZRC1 276 aa7.6□□□□□ -1.19
COL17A1-205ENST00000480127 USP49Q70CQ1 688 aa7.6□□□□□ -1.19
COL17A1-205ENST00000480127 TMEM150AQ86TG1 271 aa7.6□□□□□ -1.19
COL17A1-205ENST00000480127 ADGRF2Q8IZF7 708 aa7.6□□□□□ -1.19
COL17A1-205ENST00000480127 CMTM8Q8IZV2 173 aa7.6□□□□□ -1.19
COL17A1-205ENST00000480127 GPD1LQ8N335 351 aa7.6□□□□□ -1.19
COL17A1-205ENST00000480127 MAB21L3Q8N8X9 362 aa7.6□□□□□ -1.19
COL17A1-205ENST00000480127 FSIP1Q8NA03 581 aa7.6□□□□□ -1.19
COL17A1-205ENST00000480127 IQUBQ8NA54 791 aa7.6□□□□□ -1.19
COL17A1-205ENST00000480127 OR10T2Q8NGX3 314 aa7.6□□□□□ -1.19
COL17A1-205ENST00000480127 C2orf15Q8WU43 125 aaKnown RBP7.6□□□□□ -1.19
COL17A1-205ENST00000480127 EZH1Q92800 747 aaPredicted RBP7.6□□□□□ -1.19
COL17A1-205ENST00000480127 GATA6Q92908 595 aa7.6□□□□□ -1.19
COL17A1-205ENST00000480127 USP13Q92995 863 aaPredicted RBP7.6□□□□□ -1.19
COL17A1-205ENST00000480127 CCDC47Q96A33 483 aaKnown RBP7.6□□□□□ -1.19
COL17A1-205ENST00000480127 ADAM33Q9BZ11 813 aa7.6□□□□□ -1.19
COL17A1-205ENST00000480127 SNX25Q9H3E2 840 aa7.6□□□□□ -1.19
COL17A1-205ENST00000480127 EBF3Q9H4W6 596 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms