RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 CEBPZQ03701 1054 aaKnown RBP7.18□□□□□ -1.26
VCP-205ENST00000479300 SPAG1Q07617 926 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 MCL1Q07820 350 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 FOXC1Q12948 553 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 CUL4AQ13619 759 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 MCM6Q14566 821 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 KARSQ15046 597 aaKnown RBP7.18□□□□□ -1.26
VCP-205ENST00000479300 ARHGAP29Q52LW3 1261 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 DNTTIP2Q5QJE6 756 aaKnown RBP7.18□□□□□ -1.26
VCP-205ENST00000479300 GPR158Q5T848 1215 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 RRAGBQ5VZM2 374 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 RNF43Q68DV7 783 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 TRIM68Q6AZZ1 485 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 SLFN12LQ6IEE8 588 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 CENPPQ6IPU0 288 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 SV2BQ7L1I2 683 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 DNAJB7Q7Z6W7 309 aaPredicted RBP7.18□□□□□ -1.26
VCP-205ENST00000479300 TMEM150AQ86TG1 271 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 CD302Q8IX05 232 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 YAF2Q8IY57 180 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 SYNPOQ8N3V7 929 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 TMEM161BQ8NDZ6 487 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 E2F7Q96AV8 911 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 ZNF396Q96N95 335 aaPredicted RBP7.18□□□□□ -1.26
VCP-205ENST00000479300 ZNF830Q96NB3 372 aaPredicted RBP7.18□□□□□ -1.26
VCP-205ENST00000479300 HHIPQ96QV1 700 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 FAM83CQ9BQN1 747 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 REEP2Q9BRK0 252 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 MSTO1Q9BUK6 570 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 EDEM2Q9BV94 578 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 OXCT2Q9BYC2 517 aaPredicted RBP7.18□□□□□ -1.26
VCP-205ENST00000479300 LRRC27Q9C0I9 530 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 STK17AQ9UEE5 414 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 MAFFQ9ULX9 164 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 TBX20Q9UMR3 447 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 UBQLN1Q9UMX0 589 aaKnown RBP7.18□□□□□ -1.26
VCP-205ENST00000479300 CCL26Q9Y258 94 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 PCDHGA5Q9Y5G8 931 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 LOC400499M0QZD8 3231 aa7.18□□□□□ -1.26
VCP-205ENST00000479300 ANK1P16157 1881 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 CACNA1EQ15878 2313 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 LAMA5O15230 3695 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 BCLAF3A2AJT9 711 aaKnown RBP7.17□□□□□ -1.26
VCP-205ENST00000479300 MTMR11A4FU01 709 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 PATE3B3GLJ2 98 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 CDX4O14627 284 aaPredicted RBP7.17□□□□□ -1.26
VCP-205ENST00000479300 CTIFO43310 598 aaKnown RBP7.17□□□□□ -1.26
VCP-205ENST00000479300 RNF40O75150 1001 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 PTMAP06454 111 aaKnown RBP7.17□□□□□ -1.26
VCP-205ENST00000479300 TPM3P06753 285 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 ARSAP15289 507 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 GAP43P17677 238 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 ATF6P18850 670 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 SYT1P21579 422 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 WEE1P30291 646 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 STAT6P42226 847 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 ZNF252P-AS1Q0IIN9 211 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 GPR17Q13304 367 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 ACAP1Q15027 740 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 POSTNQ15063 836 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 STK38Q15208 465 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 ZBTB6Q15916 424 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 ITPRIPL2Q3MIP1 535 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 ARSHQ5FYA8 562 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 SH3PXD2AQ5TCZ1 1133 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 ADALQ6DHV7 355 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 CAVIN1Q6NZI2 390 aaKnown RBP7.17□□□□□ -1.26
VCP-205ENST00000479300 ARMCX5Q6P1M9 558 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 C1orf228Q6PIY5 440 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 CCDC73Q6ZRK6 1079 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 STXBP4Q6ZWJ1 553 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 ZNF771Q7L3S4 317 aaPredicted RBP7.17□□□□□ -1.26
VCP-205ENST00000479300 METTL23Q86XA0 190 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 SYCP3Q8IZU3 236 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 ABCA7Q8IZY2 2146 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 OR10T2Q8NGX3 314 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 BPIFB1Q8TDL5 484 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 PSMG2Q969U7 264 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 HVCN1Q96D96 273 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 INTS4Q96HW7 963 aaKnown RBP7.17□□□□□ -1.26
VCP-205ENST00000479300 ARID3AQ99856 593 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 LPIN3Q9BQK8 851 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 SLC46A2Q9BY10 475 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 ADAM33Q9BZ11 813 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 CCSER1Q9C0I3 900 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 GPR88Q9GZN0 384 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 ATXN3LQ9H3M9 355 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 VPS45Q9NRW7 570 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 GKN1Q9NS71 199 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 OBP2AQ9NY56 170 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 CALCOCO1Q9P1Z2 691 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 SEL1LQ9UBV2 794 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 CLIC4Q9Y696 253 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.17□□□□□ -1.26
VCP-205ENST00000479300 OBSL1O75147 1896 aa7.17□□□□□ -1.26
VCP-205ENST00000479300 SMG1Q96Q15 3661 aaKnown RBP7.16□□□□□ -1.26
VCP-205ENST00000479300 TAF4O00268 1085 aa7.16□□□□□ -1.26
VCP-205ENST00000479300 TRDMT1O14717 391 aaKnown RBP7.16□□□□□ -1.26
VCP-205ENST00000479300 STX6O43752 255 aa7.16□□□□□ -1.26
VCP-205ENST00000479300 FAM189A1O60320 539 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms