RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 CCDC186Q7Z3E2 898 aa7.17□□□□□ -1.26
USP48-208ENST00000479177 PPFIBP1Q86W92 1011 aa7.17□□□□□ -1.26
USP48-208ENST00000479177 WDR49Q8IV35 697 aa7.17□□□□□ -1.26
USP48-208ENST00000479177 AGGF1Q8N302 714 aaeCLIP7.17□□□□□ -1.26
USP48-208ENST00000479177 SMG8Q8ND04 991 aaKnown RBP7.17□□□□□ -1.26
USP48-208ENST00000479177 OR5B17Q8NGF7 314 aa7.17□□□□□ -1.26
USP48-208ENST00000479177 LINC01599Q8WXQ3 324 aa7.17□□□□□ -1.26
USP48-208ENST00000479177 IQCDQ96DY2 449 aa7.17□□□□□ -1.26
USP48-208ENST00000479177 FNBP1Q96RU3 617 aa7.17□□□□□ -1.26
USP48-208ENST00000479177 KRTAP4-7Q9BYR0 210 aa7.17□□□□□ -1.26
USP48-208ENST00000479177 TRIM6Q9C030 488 aaPredicted RBP7.17□□□□□ -1.26
USP48-208ENST00000479177 MTMR12Q9C0I1 747 aa7.17□□□□□ -1.26
USP48-208ENST00000479177 BHLHE41Q9C0J9 482 aaPredicted RBP7.17□□□□□ -1.26
USP48-208ENST00000479177 WNT8AQ9H1J5 351 aa7.17□□□□□ -1.26
USP48-208ENST00000479177 HIPK3Q9H422 1215 aa7.17□□□□□ -1.26
USP48-208ENST00000479177 SIX2Q9NPC8 291 aa7.17□□□□□ -1.26
USP48-208ENST00000479177 PLCB1Q9NQ66 1216 aa7.17□□□□□ -1.26
USP48-208ENST00000479177 CHST12Q9NRB3 414 aa7.17□□□□□ -1.26
USP48-208ENST00000479177 FAM207AQ9NSI2 230 aaPredicted RBP7.17□□□□□ -1.26
USP48-208ENST00000479177 ATP11BQ9Y2G3 1177 aa7.17□□□□□ -1.26
USP48-208ENST00000479177 COQ4Q9Y3A0 265 aa7.17□□□□□ -1.26
USP48-208ENST00000479177 IPPQ9Y573 584 aa7.17□□□□□ -1.26
USP48-208ENST00000479177 LTBP2Q14767 1821 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 AKR1B15C9JRZ8 316 aaPredicted RBP7.16□□□□□ -1.26
USP48-208ENST00000479177 H3BRJ5 948 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 NBNO60934 754 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 VNN1O95497 513 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 HLA-DRAP01903 254 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 C4BPAP04003 597 aaKnown RBP7.16□□□□□ -1.26
USP48-208ENST00000479177 CLTBP09497 229 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 ACTN1P12814 892 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 ATF7P17544 494 aaPredicted RBP7.16□□□□□ -1.26
USP48-208ENST00000479177 TNNI1P19237 187 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 TRIM21P19474 475 aaKnown RBP7.16□□□□□ -1.26
USP48-208ENST00000479177 SLC9A1P19634 815 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 NOS3P29474 1203 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 CASP14P31944 242 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 RAB27AP51159 221 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 AP3M2P53677 418 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 APBA1Q02410 837 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 CETN1Q12798 172 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 GPNMBQ14956 572 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 TMEM132DQ14C87 1099 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 KLHDC7AQ5VTJ3 777 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 JADE1Q6IE81 842 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 IGF2-ASQ6U949 168 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 NECAB2Q7Z6G3 386 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 CCNJLQ8IV13 435 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 CD302Q8IX05 232 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 CACTIN-AS1Q8N1I8 211 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 TC2NQ8N9U0 490 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 FBXL13Q8NEE6 735 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 NEK11Q8NG66 645 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 LMO3Q8TAP4 145 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 TAS1R2Q8TE23 839 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 SEMA4DQ92854 862 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 ACAP3Q96P50 834 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 DNAJC7Q99615 494 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 NUP58Q9BVL2 599 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 IFIH1Q9BYX4 1025 aaKnown RBP7.16□□□□□ -1.26
USP48-208ENST00000479177 KCNF1Q9H3M0 494 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 ASB7Q9H672 318 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 LIN7BQ9HAP6 207 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 PLEKHA5Q9HAU0 1116 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 FAM105AQ9NUU6 356 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 SNTG2Q9NY99 539 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 CEP72Q9P209 647 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 FBXL5Q9UKA1 691 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 AJAP1Q9UKB5 411 aaPredicted RBP7.16□□□□□ -1.26
USP48-208ENST00000479177 CAPN11Q9UMQ6 739 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 C2CD2Q9Y426 696 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 HES2Q9Y543 173 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 PCDHB2Q9Y5E7 798 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 FHOD1Q9Y613 1164 aa7.16□□□□□ -1.26
USP48-208ENST00000479177 SCN1AP35498 2009 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 TTC3P53804 2025 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 SOX1O00570 391 aaPredicted RBP7.15□□□□□ -1.26
USP48-208ENST00000479177 ZNF623O75123 536 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 LRRN2O75325 713 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 TNNC2P02585 160 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 CXCL10P02778 98 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 TPM1P09493 284 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 TMEM191BP0C7N4 346 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 UCHL3P15374 230 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 KCNE1P15382 129 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 ZSCAN20P17040 1043 aaPredicted RBP7.15□□□□□ -1.26
USP48-208ENST00000479177 EN2P19622 333 aaPredicted RBP7.15□□□□□ -1.26
USP48-208ENST00000479177 AKAP5P24588 427 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 PIK3CAP42336 1068 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 YARSP54577 528 aaKnown RBP7.15□□□□□ -1.26
USP48-208ENST00000479177 ADKP55263 362 aaKnown RBP7.15□□□□□ -1.26
USP48-208ENST00000479177 ZBED6P86452 979 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 TFAMQ00059 246 aaKnown RBP7.15□□□□□ -1.26
USP48-208ENST00000479177 LRMPQ12912 555 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 BIRC3Q13489 604 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 DUOXA2Q1HG44 320 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 TCTN1Q2MV58 587 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 HS1BP3Q53T59 392 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 PLEKHG4Q58EX7 1191 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 XKR4Q5GH76 650 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms