RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 ACTN4O43707 911 aaKnown RBP16.82■□□□□ 0.28
CLDN11-204ENST00000477531 KINO60870 393 aaKnown RBP16.82■□□□□ 0.28
CLDN11-204ENST00000477531 F11P03951 625 aa16.82■□□□□ 0.28
CLDN11-204ENST00000477531 PDGFRBP09619 1106 aa16.82■□□□□ 0.28
CLDN11-204ENST00000477531 FAM163BP0C2L3 166 aa16.82■□□□□ 0.28
CLDN11-204ENST00000477531 HMGA1P17096 107 aaKnown RBP16.82■□□□□ 0.28
CLDN11-204ENST00000477531 WARSP23381 471 aaKnown RBP16.82■□□□□ 0.28
CLDN11-204ENST00000477531 CCNE1P24864 410 aa16.82■□□□□ 0.28
CLDN11-204ENST00000477531 GNL1P36915 607 aaPredicted RBP16.82■□□□□ 0.28
CLDN11-204ENST00000477531 MAGEA11P43364 429 aa16.82■□□□□ 0.28
CLDN11-204ENST00000477531 SYKP43405 635 aa16.82■□□□□ 0.28
CLDN11-204ENST00000477531 GPR15P49685 360 aa16.82■□□□□ 0.28
CLDN11-204ENST00000477531 AP3M2P53677 418 aa16.82■□□□□ 0.28
CLDN11-204ENST00000477531 LRRC32Q14392 662 aa16.82■□□□□ 0.28
CLDN11-204ENST00000477531 SDHAF4Q5VUM1 108 aa16.82■□□□□ 0.28
CLDN11-204ENST00000477531 SCARA3Q6AZY7 606 aa16.82■□□□□ 0.28
CLDN11-204ENST00000477531 FAM171BQ6P995 826 aa16.82■□□□□ 0.28
CLDN11-204ENST00000477531 FSIP1Q8NA03 581 aa16.82■□□□□ 0.28
CLDN11-204ENST00000477531 ATRIPQ8WXE1 791 aa16.82■□□□□ 0.28
CLDN11-204ENST00000477531 SLC46A2Q9BY10 475 aa16.82■□□□□ 0.28
CLDN11-204ENST00000477531 SCAND2PQ9GZW5 306 aaPredicted RBP16.82■□□□□ 0.28
CLDN11-204ENST00000477531 DMDP11532 3685 aa16.82■□□□□ 0.28
CLDN11-204ENST00000477531 NCANO14594 1321 aa16.81■□□□□ 0.28
CLDN11-204ENST00000477531 SLC38A8A6NNN8 435 aa16.81■□□□□ 0.28
CLDN11-204ENST00000477531 NOL4O94818 638 aa16.81■□□□□ 0.28
CLDN11-204ENST00000477531 KIF20AO95235 890 aa16.81■□□□□ 0.28
CLDN11-204ENST00000477531 PRAMEF12O95522 483 aa16.81■□□□□ 0.28
CLDN11-204ENST00000477531 CST3P01034 146 aaPredicted RBP16.81■□□□□ 0.28
CLDN11-204ENST00000477531 ANXA13P27216 316 aa16.81■□□□□ 0.28
CLDN11-204ENST00000477531 ATICP31939 592 aa16.81■□□□□ 0.28
CLDN11-204ENST00000477531 GRIK1P39086 918 aa16.81■□□□□ 0.28
CLDN11-204ENST00000477531 PSMC1P62191 440 aaKnown RBP16.81■□□□□ 0.28
CLDN11-204ENST00000477531 CYP27A1Q02318 531 aa16.81■□□□□ 0.28
CLDN11-204ENST00000477531 BIRC3Q13489 604 aa16.81■□□□□ 0.28
CLDN11-204ENST00000477531 WDR72Q3MJ13 1102 aa16.81■□□□□ 0.28
CLDN11-204ENST00000477531 KMT5BQ4FZB7 885 aa16.81■□□□□ 0.28
CLDN11-204ENST00000477531 CC2D1AQ6P1N0 951 aaPredicted RBP16.81■□□□□ 0.28
CLDN11-204ENST00000477531 VSTM1Q6UX27 236 aa16.81■□□□□ 0.28
CLDN11-204ENST00000477531 LIMS2Q7Z4I7 341 aa16.81■□□□□ 0.28
CLDN11-204ENST00000477531 MON1AQ86VX9 555 aa16.81■□□□□ 0.28
CLDN11-204ENST00000477531 RALGPS2Q86X27 583 aaPredicted RBP16.81■□□□□ 0.28
CLDN11-204ENST00000477531 MAML2Q8IZL2 1156 aaPredicted RBP16.81■□□□□ 0.28
CLDN11-204ENST00000477531 OR6B3Q8NGW1 331 aa16.81■□□□□ 0.28
CLDN11-204ENST00000477531 KBTBD7Q8WVZ9 684 aa16.81■□□□□ 0.28
CLDN11-204ENST00000477531 SYAP1Q96A49 352 aaPredicted RBP16.81■□□□□ 0.28
CLDN11-204ENST00000477531 TRMT2BQ96GJ1 504 aaKnown RBP16.81■□□□□ 0.28
CLDN11-204ENST00000477531 PKMYT1Q99640 499 aa16.81■□□□□ 0.28
CLDN11-204ENST00000477531 CHRDQ9H2X0 955 aa16.81■□□□□ 0.28
CLDN11-204ENST00000477531 KIF9Q9HAQ2 790 aa16.81■□□□□ 0.28
CLDN11-204ENST00000477531 KLRC4O43908 158 aa16.8■□□□□ 0.28
CLDN11-204ENST00000477531 ATP2C2O75185 946 aa16.8■□□□□ 0.28
CLDN11-204ENST00000477531 TACC1O75410 805 aa16.8■□□□□ 0.28
CLDN11-204ENST00000477531 LMO2P25791 158 aa16.8■□□□□ 0.28
CLDN11-204ENST00000477531 STK4Q13043 487 aa16.8■□□□□ 0.28
CLDN11-204ENST00000477531 MTAPQ13126 283 aa16.8■□□□□ 0.28
CLDN11-204ENST00000477531 FZD5Q13467 585 aa16.8■□□□□ 0.28
CLDN11-204ENST00000477531 TXNDC8Q6A555 127 aa16.8■□□□□ 0.28
CLDN11-204ENST00000477531 MYCBPAPQ8TBZ2 947 aa16.8■□□□□ 0.28
CLDN11-204ENST00000477531 MYLPFQ96A32 169 aa16.8■□□□□ 0.28
CLDN11-204ENST00000477531 CCDC34Q96HJ3 373 aa16.8■□□□□ 0.28
CLDN11-204ENST00000477531 ZFYVE19Q96K21 471 aa16.8■□□□□ 0.28
CLDN11-204ENST00000477531 MYRFLQ96LU7 910 aa16.8■□□□□ 0.28
CLDN11-204ENST00000477531 LRRC3BQ96PB8 259 aa16.8■□□□□ 0.28
CLDN11-204ENST00000477531 HINFPQ9BQA5 517 aa16.8■□□□□ 0.28
CLDN11-204ENST00000477531 SMG9Q9H0W8 520 aaKnown RBP16.8■□□□□ 0.28
CLDN11-204ENST00000477531 TDP1Q9NUW8 608 aa16.8■□□□□ 0.28
CLDN11-204ENST00000477531 ZSCAN32Q9NX65 697 aa16.8■□□□□ 0.28
CLDN11-204ENST00000477531 EHD2Q9NZN4 543 aa16.8■□□□□ 0.28
CLDN11-204ENST00000477531 NXF1Q9UBU9 619 aaKnown RBP16.8■□□□□ 0.28
CLDN11-204ENST00000477531 PCDHGA2Q9Y5H1 932 aa16.8■□□□□ 0.28
CLDN11-204ENST00000477531 COL4A3Q01955 1670 aa16.8■□□□□ 0.28
CLDN11-204ENST00000477531 TICRRQ7Z2Z1 1910 aa16.8■□□□□ 0.28
CLDN11-204ENST00000477531 CFAP54Q96N23 3096 aa16.79■□□□□ 0.28
CLDN11-204ENST00000477531 TRAV19A0A0A6YYK7 116 aa16.79■□□□□ 0.28
CLDN11-204ENST00000477531 SHISA7A6NL88 538 aa16.79■□□□□ 0.28
CLDN11-204ENST00000477531 SPECC1L-ADORA2AF8WAN1 911 aa16.79■□□□□ 0.28
CLDN11-204ENST00000477531 TRIM66O15016 1216 aa16.79■□□□□ 0.28
CLDN11-204ENST00000477531 HCRTO43612 131 aa16.79■□□□□ 0.28
CLDN11-204ENST00000477531 CALUO43852 315 aaPredicted RBP16.79■□□□□ 0.28
CLDN11-204ENST00000477531 STAU1O95793 577 aaKnown RBP16.79■□□□□ 0.28
CLDN11-204ENST00000477531 BDNFP23560 247 aa16.79■□□□□ 0.28
CLDN11-204ENST00000477531 CCR3P51677 355 aa16.79■□□□□ 0.28
CLDN11-204ENST00000477531 NRLP54845 237 aa16.79■□□□□ 0.28
CLDN11-204ENST00000477531 AMPD2Q01433 879 aa16.79■□□□□ 0.28
CLDN11-204ENST00000477531 ITPRIPL2Q3MIP1 535 aa16.79■□□□□ 0.28
CLDN11-204ENST00000477531 MAMSTRQ6ZN01 415 aa16.79■□□□□ 0.28
CLDN11-204ENST00000477531 TMEM150AQ86TG1 271 aa16.79■□□□□ 0.28
CLDN11-204ENST00000477531 SLC9A9Q8IVB4 645 aa16.79■□□□□ 0.28
CLDN11-204ENST00000477531 KIAA0895Q8NCT3 520 aa16.79■□□□□ 0.28
CLDN11-204ENST00000477531 STKLD1Q8NE28 680 aa16.79■□□□□ 0.28
CLDN11-204ENST00000477531 TTC8Q8TAM2 541 aa16.79■□□□□ 0.28
CLDN11-204ENST00000477531 CEP295NLQ96MC4 621 aa16.79■□□□□ 0.28
CLDN11-204ENST00000477531 MRPL45Q9BRJ2 306 aaKnown RBP16.79■□□□□ 0.28
CLDN11-204ENST00000477531 FAM126AQ9BYI3 521 aaPredicted RBP16.79■□□□□ 0.28
CLDN11-204ENST00000477531 TRPC7Q9HCX4 862 aa16.79■□□□□ 0.28
CLDN11-204ENST00000477531 GKN1Q9NS71 199 aa16.79■□□□□ 0.28
CLDN11-204ENST00000477531 GTSE1Q9NYZ3 720 aa16.79■□□□□ 0.28
CLDN11-204ENST00000477531 HPSEQ9Y251 543 aa16.79■□□□□ 0.28
CLDN11-204ENST00000477531 FRMD4BQ9Y2L6 1034 aa16.79■□□□□ 0.28
CLDN11-204ENST00000477531 NUP210Q8TEM1 1887 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms