RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 ODF2LQ9ULJ1 636 aa12.9□□□□□ -0.34
HDAC6-219ENST00000476625 WASF3Q9UPY6 502 aa12.9□□□□□ -0.34
HDAC6-219ENST00000476625 PCDHB5Q9Y5E4 795 aa12.9□□□□□ -0.34
HDAC6-219ENST00000476625 BCLAF3A2AJT9 711 aaKnown RBP12.89□□□□□ -0.35
HDAC6-219ENST00000476625 GOLGA8IPA6NC78 632 aa12.89□□□□□ -0.35
HDAC6-219ENST00000476625 GOLGA8JA6NMD2 632 aa12.89□□□□□ -0.35
HDAC6-219ENST00000476625 KPNA7A9QM74 516 aa12.89□□□□□ -0.35
HDAC6-219ENST00000476625 CD2BP2O95400 341 aaKnown RBP12.89□□□□□ -0.35
HDAC6-219ENST00000476625 ITGB3P05106 788 aa12.89□□□□□ -0.35
HDAC6-219ENST00000476625 KRT18P05783 430 aaKnown RBP12.89□□□□□ -0.35
HDAC6-219ENST00000476625 ADSSP30520 456 aa12.89□□□□□ -0.35
HDAC6-219ENST00000476625 OPRD1P41143 372 aa12.89□□□□□ -0.35
HDAC6-219ENST00000476625 GTF2BQ00403 316 aa12.89□□□□□ -0.35
HDAC6-219ENST00000476625 LMBRD2Q68DH5 695 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-219ENST00000476625 ANO7Q6IWH7 933 aa12.89□□□□□ -0.35
HDAC6-219ENST00000476625 CC2D1AQ6P1N0 951 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-219ENST00000476625 USP49Q70CQ1 688 aa12.89□□□□□ -0.35
HDAC6-219ENST00000476625 DYMQ7RTS9 669 aa12.89□□□□□ -0.35
HDAC6-219ENST00000476625 SFR1Q86XK3 245 aa12.89□□□□□ -0.35
HDAC6-219ENST00000476625 THEM5Q8N1Q8 247 aa12.89□□□□□ -0.35
HDAC6-219ENST00000476625 RLN3Q8WXF3 142 aa12.89□□□□□ -0.35
HDAC6-219ENST00000476625 MRPS31Q92665 395 aaKnown RBP12.89□□□□□ -0.35
HDAC6-219ENST00000476625 RAD54LQ92698 747 aa12.89□□□□□ -0.35
HDAC6-219ENST00000476625 PARVGQ9HBI0 331 aa12.89□□□□□ -0.35
HDAC6-219ENST00000476625 DDX43Q9NXZ2 648 aaKnown RBP12.89□□□□□ -0.35
HDAC6-219ENST00000476625 TBC1D7Q9P0N9 293 aa12.89□□□□□ -0.35
HDAC6-219ENST00000476625 PCDHGA5Q9Y5G8 931 aa12.89□□□□□ -0.35
HDAC6-219ENST00000476625 WDFY3Q8IZQ1 3526 aa12.88□□□□□ -0.35
HDAC6-219ENST00000476625 CCDC163A0A0D9SF12 145 aa12.88□□□□□ -0.35
HDAC6-219ENST00000476625 CDX4O14627 284 aaPredicted RBP12.88□□□□□ -0.35
HDAC6-219ENST00000476625 ATG13O75143 517 aa12.88□□□□□ -0.35
HDAC6-219ENST00000476625 AKAP3O75969 853 aa12.88□□□□□ -0.35
HDAC6-219ENST00000476625 NOL4O94818 638 aa12.88□□□□□ -0.35
HDAC6-219ENST00000476625 APBB3O95704 486 aa12.88□□□□□ -0.35
HDAC6-219ENST00000476625 DRD1P21728 446 aa12.88□□□□□ -0.35
HDAC6-219ENST00000476625 SLC6A11P48066 632 aa12.88□□□□□ -0.35
HDAC6-219ENST00000476625 USP46P62068 366 aa12.88□□□□□ -0.35
HDAC6-219ENST00000476625 PSMC1P62191 440 aaKnown RBP12.88□□□□□ -0.35
HDAC6-219ENST00000476625 TFAMQ00059 246 aaKnown RBP12.88□□□□□ -0.35
HDAC6-219ENST00000476625 UAP1L1Q3KQV9 507 aa12.88□□□□□ -0.35
HDAC6-219ENST00000476625 PMS2CLQ68D20 193 aa12.88□□□□□ -0.35
HDAC6-219ENST00000476625 TMEM92Q6UXU6 159 aa12.88□□□□□ -0.35
HDAC6-219ENST00000476625 SYT13Q7L8C5 426 aa12.88□□□□□ -0.35
HDAC6-219ENST00000476625 SCN4BQ8IWT1 228 aa12.88□□□□□ -0.35
HDAC6-219ENST00000476625 CAMKK1Q8N5S9 505 aa12.88□□□□□ -0.35
HDAC6-219ENST00000476625 DEFB124Q8NES8 71 aa12.88□□□□□ -0.35
HDAC6-219ENST00000476625 MDGA1Q8NFP4 955 aa12.88□□□□□ -0.35
HDAC6-219ENST00000476625 SH3RF2Q8TEC5 729 aa12.88□□□□□ -0.35
HDAC6-219ENST00000476625 OSCP1Q8WVF1 389 aa12.88□□□□□ -0.35
HDAC6-219ENST00000476625 ERLEC1Q96DZ1 483 aa12.88□□□□□ -0.35
HDAC6-219ENST00000476625 ZSCAN31Q96LW9 406 aaPredicted RBP12.88□□□□□ -0.35
HDAC6-219ENST00000476625 FAM213AQ9BRX8 229 aa12.88□□□□□ -0.35
HDAC6-219ENST00000476625 KCND2Q9NZV8 630 aa12.88□□□□□ -0.35
HDAC6-219ENST00000476625 GCNT4Q9P109 453 aa12.88□□□□□ -0.35
HDAC6-219ENST00000476625 DAXXQ9UER7 740 aaPredicted RBP12.88□□□□□ -0.35
HDAC6-219ENST00000476625 DSEQ9UL01 958 aa12.88□□□□□ -0.35
HDAC6-219ENST00000476625 AGAP1Q9UPQ3 857 aa12.88□□□□□ -0.35
HDAC6-219ENST00000476625 DERAQ9Y315 318 aa12.88□□□□□ -0.35
HDAC6-219ENST00000476625 C2CD2Q9Y426 696 aa12.88□□□□□ -0.35
HDAC6-219ENST00000476625 PTPRJQ12913 1337 aa12.88□□□□□ -0.35
HDAC6-219ENST00000476625 SPEGQ15772 3267 aa12.87□□□□□ -0.35
HDAC6-219ENST00000476625 AKAP13Q12802 2813 aa12.87□□□□□ -0.35
HDAC6-219ENST00000476625 ASPMQ8IZT6 3477 aa12.87□□□□□ -0.35
HDAC6-219ENST00000476625 H0YCG3 227 aa12.87□□□□□ -0.35
HDAC6-219ENST00000476625 K7EQS6 105 aa12.87□□□□□ -0.35
HDAC6-219ENST00000476625 FOXD2O60548 495 aaPredicted RBP12.87□□□□□ -0.35
HDAC6-219ENST00000476625 CKMP06732 381 aa12.87□□□□□ -0.35
HDAC6-219ENST00000476625 CSH1P0DML2 217 aa12.87□□□□□ -0.35
HDAC6-219ENST00000476625 CSH2P0DML3 217 aa12.87□□□□□ -0.35
HDAC6-219ENST00000476625 IFNAR2P48551 515 aa12.87□□□□□ -0.35
HDAC6-219ENST00000476625 CASP5P51878 434 aa12.87□□□□□ -0.35
HDAC6-219ENST00000476625 IRX4P78413 519 aa12.87□□□□□ -0.35
HDAC6-219ENST00000476625 FAM160A1Q05DH4 1040 aa12.87□□□□□ -0.35
HDAC6-219ENST00000476625 PDGFRLQ15198 375 aa12.87□□□□□ -0.35
HDAC6-219ENST00000476625 PTPAQ15257 358 aa12.87□□□□□ -0.35
HDAC6-219ENST00000476625 ELF2Q15723 593 aa12.87□□□□□ -0.35
HDAC6-219ENST00000476625 KYAT1Q16773 422 aa12.87□□□□□ -0.35
HDAC6-219ENST00000476625 SV2CQ496J9 727 aa12.87□□□□□ -0.35
HDAC6-219ENST00000476625 RILPL1Q5EBL4 403 aa12.87□□□□□ -0.35
HDAC6-219ENST00000476625 INTS6LQ5JSJ4 861 aaKnown RBP12.87□□□□□ -0.35
HDAC6-219ENST00000476625 EMC10Q5UCC4 262 aa12.87□□□□□ -0.35
HDAC6-219ENST00000476625 C12orf40Q86WS4 652 aa12.87□□□□□ -0.35
HDAC6-219ENST00000476625 CD302Q8IX05 232 aa12.87□□□□□ -0.35
HDAC6-219ENST00000476625 DCP1BQ8IZD4 617 aaKnown RBP12.87□□□□□ -0.35
HDAC6-219ENST00000476625 CPA6Q8N4T0 437 aa12.87□□□□□ -0.35
HDAC6-219ENST00000476625 C1orf127Q8N9H9 656 aa12.87□□□□□ -0.35
HDAC6-219ENST00000476625 TSTD1Q8NFU3 115 aa12.87□□□□□ -0.35
HDAC6-219ENST00000476625 CXorf38Q8TB03 319 aa12.87□□□□□ -0.35
HDAC6-219ENST00000476625 USP33Q8TEY7 942 aa12.87□□□□□ -0.35
HDAC6-219ENST00000476625 NOC3LQ8WTT2 800 aaKnown RBP12.87□□□□□ -0.35
HDAC6-219ENST00000476625 C2orf15Q8WU43 125 aaKnown RBP12.87□□□□□ -0.35
HDAC6-219ENST00000476625 POMGNT1Q8WZA1 660 aa12.87□□□□□ -0.35
HDAC6-219ENST00000476625 KCNN1Q92952 543 aa12.87□□□□□ -0.35
HDAC6-219ENST00000476625 CCSER1Q9C0I3 900 aa12.87□□□□□ -0.35
HDAC6-219ENST00000476625 ASB7Q9H672 318 aa12.87□□□□□ -0.35
HDAC6-219ENST00000476625 KIF9Q9HAQ2 790 aa12.87□□□□□ -0.35
HDAC6-219ENST00000476625 SH2B1Q9NRF2 756 aaPredicted RBP12.87□□□□□ -0.35
HDAC6-219ENST00000476625 CIZ1Q9ULV3 898 aaPredicted RBP12.87□□□□□ -0.35
HDAC6-219ENST00000476625 NME7Q9Y5B8 376 aa12.87□□□□□ -0.35
HDAC6-219ENST00000476625 STYXL1Q9Y6J8 313 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms