RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 SLC35B2Q8TB61 432 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 SKA1Q96BD8 255 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 LRRC39Q96DD0 335 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 PTCD3Q96EY7 689 aaKnown RBP6.42□□□□□ -1.38
HERC4-209ENST00000473533 CEP170P1Q96L14 293 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 FAM213AQ9BRX8 229 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 NDE1Q9NXR1 346 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 BCAP29Q9UHQ4 241 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 ZNF180Q9UJW8 692 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 AGO2Q9UKV8 859 aaKnown RBP6.42□□□□□ -1.38
HERC4-209ENST00000473533 ZMYND8Q9ULU4 1186 aaPredicted RBP6.42□□□□□ -1.38
HERC4-209ENST00000473533 PPME1Q9Y570 386 aa6.42□□□□□ -1.38
HERC4-209ENST00000473533 FAM196BA6NMK8 535 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 H0Y3Z8 333 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 KRT38O76015 456 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 ECM2O94769 699 aaPredicted RBP6.41□□□□□ -1.38
HERC4-209ENST00000473533 IFNB1P01574 187 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 PDHA1P08559 390 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 SERPINB4P48594 390 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 UBXN2AP68543 259 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 DSG1Q02413 1049 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 SLC18A2Q05940 514 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 CUL3Q13618 768 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 KAZNQ674X7 775 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 TMEM270Q6UE05 265 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 SMIM5Q71RC9 77 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 ZC3H18Q86VM9 953 aaKnown RBP6.41□□□□□ -1.38
HERC4-209ENST00000473533 CRLF3Q8IUI8 442 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 TCP10LQ8TDR4 215 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 SCG3Q8WXD2 468 aaKnown RBP6.41□□□□□ -1.38
HERC4-209ENST00000473533 PPP2R3CQ969Q6 453 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 HAUS1Q96CS2 278 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 OXNAD1Q96HP4 312 aaPredicted RBP6.41□□□□□ -1.38
HERC4-209ENST00000473533 TMEM120AQ9BXJ8 343 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 CADM1Q9BY67 442 aaKnown RBP6.41□□□□□ -1.38
HERC4-209ENST00000473533 C1orf21Q9H246 121 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 SUDS3Q9H7L9 328 aaPredicted RBP6.41□□□□□ -1.38
HERC4-209ENST00000473533 PNPLA8Q9NP80 782 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 SLCO1B3Q9NPD5 702 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 DLGAP2Q9P1A6 1054 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 TAGLN3Q9UI15 199 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 FARP1Q9Y4F1 1045 aaPredicted RBP6.41□□□□□ -1.38
HERC4-209ENST00000473533 STYXL1Q9Y6J8 313 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 BIRC5O15392 142 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 DHRS4L1P0CG22 281 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 GNAT1P11488 350 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 MYL4P12829 197 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 GLRA2P23416 452 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 PTK7Q13308 1070 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 DLGAP5Q15398 846 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 MTHFD1LQ6UB35 978 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 RHPN2Q8IUC4 686 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 EXOC8Q8IYI6 725 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 MAK16Q9BXY0 300 aaKnown RBP6.41□□□□□ -1.38
HERC4-209ENST00000473533 GCOM2Q9BZD3 368 aaPredicted RBP6.41□□□□□ -1.38
HERC4-209ENST00000473533 RSAD1Q9HA92 442 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 ENO4A6NNW6 628 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 TISP43B9A030 160 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 CHADO15335 359 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 ATP9AO75110 1047 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 SKAP2O75563 359 aaPredicted RBP6.41□□□□□ -1.38
HERC4-209ENST00000473533 KLHL2O95198 593 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 C4BPAP04003 597 aaKnown RBP6.41□□□□□ -1.38
HERC4-209ENST00000473533 SNRPAP09012 282 aaKnown RBP6.41□□□□□ -1.38
HERC4-209ENST00000473533 RARBP10826 455 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 ADRA1DP25100 572 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 CDKN2BP42772 138 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 PTGER2P43116 358 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 NOP14P78316 857 aaKnown RBP6.41□□□□□ -1.38
HERC4-209ENST00000473533 MAP7Q14244 749 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 PRKD1Q15139 912 aaPredicted RBP6.41□□□□□ -1.38
HERC4-209ENST00000473533 MFSD7Q6UXD7 560 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 KYAT3Q6YP21 454 aaKnown RBP6.41□□□□□ -1.38
HERC4-209ENST00000473533 SEPT14Q6ZU15 432 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 ARCQ7LC44 396 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 SLC26A11Q86WA9 606 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 FAM136AQ96C01 138 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 DMAP1Q9NPF5 467 aaPredicted RBP6.41□□□□□ -1.38
HERC4-209ENST00000473533 DDX43Q9NXZ2 648 aaKnown RBP6.41□□□□□ -1.38
HERC4-209ENST00000473533 PAK5Q9P286 719 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 ARHGAP28Q9P2N2 729 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 DCTN4Q9UJW0 460 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 PCDHGC3Q9UN70 934 aa6.41□□□□□ -1.38
HERC4-209ENST00000473533 FAM170AA1A519 330 aa6.4□□□□□ -1.38
HERC4-209ENST00000473533 ANKRD33BA6NCL7 494 aa6.4□□□□□ -1.38
HERC4-209ENST00000473533 ENTPD5O75356 428 aa6.4□□□□□ -1.38
HERC4-209ENST00000473533 RNF8O76064 485 aa6.4□□□□□ -1.38
HERC4-209ENST00000473533 ACO1P21399 889 aaKnown RBP6.4□□□□□ -1.38
HERC4-209ENST00000473533 CDH5P33151 784 aaPredicted RBP6.4□□□□□ -1.38
HERC4-209ENST00000473533 NEK3P51956 506 aa6.4□□□□□ -1.38
HERC4-209ENST00000473533 CACNA2D1P54289 1103 aa6.4□□□□□ -1.38
HERC4-209ENST00000473533 CTC1Q2NKJ3 1217 aa6.4□□□□□ -1.38
HERC4-209ENST00000473533 GNPTABQ3T906 1256 aa6.4□□□□□ -1.38
HERC4-209ENST00000473533 STXBP5Q5T5C0 1151 aa6.4□□□□□ -1.38
HERC4-209ENST00000473533 STYK1Q6J9G0 422 aa6.4□□□□□ -1.38
HERC4-209ENST00000473533 CPNE8Q86YQ8 564 aa6.4□□□□□ -1.38
HERC4-209ENST00000473533 MAP7D3Q8IWC1 876 aa6.4□□□□□ -1.38
HERC4-209ENST00000473533 SCUBE1Q8IWY4 988 aa6.4□□□□□ -1.38
HERC4-209ENST00000473533 NAT8LQ8N9F0 302 aa6.4□□□□□ -1.38
HERC4-209ENST00000473533 FBXO36Q8NEA4 188 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms