RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 PMS2CLQ68D20 193 aa13.6□□□□□ -0.23
TRAF4-209ENST00000473421 PDCL2Q8N4E4 241 aa13.6□□□□□ -0.23
TRAF4-209ENST00000473421 CCDC33Q8N5R6 958 aa13.6□□□□□ -0.23
TRAF4-209ENST00000473421 ARL14EPQ8N8R7 260 aaPredicted RBP13.6□□□□□ -0.23
TRAF4-209ENST00000473421 KDF1Q8NAX2 398 aaPredicted RBP13.6□□□□□ -0.23
TRAF4-209ENST00000473421 RLN3Q8WXF3 142 aa13.6□□□□□ -0.23
TRAF4-209ENST00000473421 GATA6Q92908 595 aa13.6□□□□□ -0.23
TRAF4-209ENST00000473421 SCNM1Q9BWG6 230 aa13.6□□□□□ -0.23
TRAF4-209ENST00000473421 TRPC7Q9HCX4 862 aa13.6□□□□□ -0.23
TRAF4-209ENST00000473421 ZDHHC4Q9NPG8 344 aa13.6□□□□□ -0.23
TRAF4-209ENST00000473421 DUS2Q9NX74 493 aaKnown RBP13.6□□□□□ -0.23
TRAF4-209ENST00000473421 GCNT4Q9P109 453 aa13.6□□□□□ -0.23
TRAF4-209ENST00000473421 EBF1Q9UH73 591 aa13.6□□□□□ -0.23
TRAF4-209ENST00000473421 L1RE1Q9UN81 338 aa13.6□□□□□ -0.23
TRAF4-209ENST00000473421 PCDHB5Q9Y5E4 795 aa13.6□□□□□ -0.23
TRAF4-209ENST00000473421 TRAK2O60296 914 aa13.59□□□□□ -0.23
TRAF4-209ENST00000473421 ATP2C2O75185 946 aa13.59□□□□□ -0.23
TRAF4-209ENST00000473421 OPRD1P41143 372 aa13.59□□□□□ -0.23
TRAF4-209ENST00000473421 HMGN5P82970 282 aaKnown RBP13.59□□□□□ -0.23
TRAF4-209ENST00000473421 GTF2BQ00403 316 aa13.59□□□□□ -0.23
TRAF4-209ENST00000473421 PTPAQ15257 358 aa13.59□□□□□ -0.23
TRAF4-209ENST00000473421 ELF2Q15723 593 aa13.59□□□□□ -0.23
TRAF4-209ENST00000473421 KYAT1Q16773 422 aa13.59□□□□□ -0.23
TRAF4-209ENST00000473421 C2orf27AQ580R0 203 aa13.59□□□□□ -0.23
TRAF4-209ENST00000473421 ADALQ6DHV7 355 aa13.59□□□□□ -0.23
TRAF4-209ENST00000473421 KIAA1211LQ6NV74 962 aa13.59□□□□□ -0.23
TRAF4-209ENST00000473421 CC2D1AQ6P1N0 951 aaPredicted RBP13.59□□□□□ -0.23
TRAF4-209ENST00000473421 TMEM92Q6UXU6 159 aa13.59□□□□□ -0.23
TRAF4-209ENST00000473421 METTL23Q86XA0 190 aa13.59□□□□□ -0.23
TRAF4-209ENST00000473421 THEM5Q8N1Q8 247 aa13.59□□□□□ -0.23
TRAF4-209ENST00000473421 DEFB124Q8NES8 71 aa13.59□□□□□ -0.23
TRAF4-209ENST00000473421 MDGA1Q8NFP4 955 aa13.59□□□□□ -0.23
TRAF4-209ENST00000473421 CXorf38Q8TB03 319 aa13.59□□□□□ -0.23
TRAF4-209ENST00000473421 USP33Q8TEY7 942 aa13.59□□□□□ -0.23
TRAF4-209ENST00000473421 OSCP1Q8WVF1 389 aa13.59□□□□□ -0.23
TRAF4-209ENST00000473421 MRPS31Q92665 395 aaKnown RBP13.59□□□□□ -0.23
TRAF4-209ENST00000473421 CD101Q93033 1021 aa13.59□□□□□ -0.23
TRAF4-209ENST00000473421 CCSER1Q9C0I3 900 aa13.59□□□□□ -0.23
TRAF4-209ENST00000473421 ZHX3Q9H4I2 956 aa13.59□□□□□ -0.23
TRAF4-209ENST00000473421 FSCN3Q9NQT6 498 aa13.59□□□□□ -0.23
TRAF4-209ENST00000473421 TMEM74BQ9NUR3 256 aa13.59□□□□□ -0.23
TRAF4-209ENST00000473421 GTF3C4Q9UKN8 822 aa13.59□□□□□ -0.23
TRAF4-209ENST00000473421 DSEQ9UL01 958 aa13.59□□□□□ -0.23
TRAF4-209ENST00000473421 ODF2LQ9ULJ1 636 aa13.59□□□□□ -0.23
TRAF4-209ENST00000473421 DERAQ9Y315 318 aa13.59□□□□□ -0.23
TRAF4-209ENST00000473421 C2CD2Q9Y426 696 aa13.59□□□□□ -0.23
TRAF4-209ENST00000473421 NBEAQ8NFP9 2946 aa13.58□□□□□ -0.24
TRAF4-209ENST00000473421 SRRM3A6NNA2 597 aaPredicted RBP13.58□□□□□ -0.24
TRAF4-209ENST00000473421 NOL4O94818 638 aa13.58□□□□□ -0.24
TRAF4-209ENST00000473421 RHOBTB1O94844 696 aa13.58□□□□□ -0.24
TRAF4-209ENST00000473421 FAM13AO94988 1023 aa13.58□□□□□ -0.24
TRAF4-209ENST00000473421 FAM160A1Q05DH4 1040 aa13.58□□□□□ -0.24
TRAF4-209ENST00000473421 USP4Q13107 963 aa13.58□□□□□ -0.24
TRAF4-209ENST00000473421 ZNF268Q14587 947 aaPredicted RBP13.58□□□□□ -0.24
TRAF4-209ENST00000473421 KARSQ15046 597 aaKnown RBP13.58□□□□□ -0.24
TRAF4-209ENST00000473421 PDGFRLQ15198 375 aa13.58□□□□□ -0.24
TRAF4-209ENST00000473421 EMC10Q5UCC4 262 aa13.58□□□□□ -0.24
TRAF4-209ENST00000473421 MCTP1Q6DN14 999 aa13.58□□□□□ -0.24
TRAF4-209ENST00000473421 ANO7Q6IWH7 933 aa13.58□□□□□ -0.24
TRAF4-209ENST00000473421 RASSF3Q86WH2 238 aa13.58□□□□□ -0.24
TRAF4-209ENST00000473421 CD302Q8IX05 232 aa13.58□□□□□ -0.24
TRAF4-209ENST00000473421 SH3RF2Q8TEC5 729 aa13.58□□□□□ -0.24
TRAF4-209ENST00000473421 C2orf15Q8WU43 125 aaKnown RBP13.58□□□□□ -0.24
TRAF4-209ENST00000473421 TSPAN18Q96SJ8 248 aa13.58□□□□□ -0.24
TRAF4-209ENST00000473421 ADAM33Q9BZ11 813 aa13.58□□□□□ -0.24
TRAF4-209ENST00000473421 ASB7Q9H672 318 aa13.58□□□□□ -0.24
TRAF4-209ENST00000473421 PARVGQ9HBI0 331 aa13.58□□□□□ -0.24
TRAF4-209ENST00000473421 KCND2Q9NZV8 630 aa13.58□□□□□ -0.24
TRAF4-209ENST00000473421 KCNG1Q9UIX4 513 aa13.58□□□□□ -0.24
TRAF4-209ENST00000473421 STYXL1Q9Y6J8 313 aa13.58□□□□□ -0.24
TRAF4-209ENST00000473421 MYOFQ9NZM1 2061 aa13.58□□□□□ -0.24
TRAF4-209ENST00000473421 PKD1L2Q7Z442 2459 aa13.58□□□□□ -0.24
TRAF4-209ENST00000473421 PCNX2A6NKB5 2137 aa13.58□□□□□ -0.24
TRAF4-209ENST00000473421 FREM2Q5SZK8 3169 aa13.58□□□□□ -0.24
TRAF4-209ENST00000473421 DSPP15924 2871 aaKnown RBP13.57□□□□□ -0.24
TRAF4-209ENST00000473421 TULP1O00294 542 aaPredicted RBP13.57□□□□□ -0.24
TRAF4-209ENST00000473421 CSH1P0DML2 217 aa13.57□□□□□ -0.24
TRAF4-209ENST00000473421 CSH2P0DML3 217 aa13.57□□□□□ -0.24
TRAF4-209ENST00000473421 PLCG1P19174 1290 aa13.57□□□□□ -0.24
TRAF4-209ENST00000473421 DDX6P26196 483 aaKnown RBP eCLIP13.57□□□□□ -0.24
TRAF4-209ENST00000473421 POLR2BP30876 1174 aaKnown RBP13.57□□□□□ -0.24
TRAF4-209ENST00000473421 SLC6A11P48066 632 aa13.57□□□□□ -0.24
TRAF4-209ENST00000473421 USP46P62068 366 aa13.57□□□□□ -0.24
TRAF4-209ENST00000473421 UAP1L1Q3KQV9 507 aa13.57□□□□□ -0.24
TRAF4-209ENST00000473421 FBXO43Q4G163 708 aa13.57□□□□□ -0.24
TRAF4-209ENST00000473421 USP49Q70CQ1 688 aa13.57□□□□□ -0.24
TRAF4-209ENST00000473421 ARMCX6Q7L4S7 300 aa13.57□□□□□ -0.24
TRAF4-209ENST00000473421 DCP1BQ8IZD4 617 aaKnown RBP13.57□□□□□ -0.24
TRAF4-209ENST00000473421 CPA6Q8N4T0 437 aa13.57□□□□□ -0.24
TRAF4-209ENST00000473421 C1orf127Q8N9H9 656 aa13.57□□□□□ -0.24
TRAF4-209ENST00000473421 TSTD1Q8NFU3 115 aa13.57□□□□□ -0.24
TRAF4-209ENST00000473421 CDK5RAP3Q96JB5 506 aa13.57□□□□□ -0.24
TRAF4-209ENST00000473421 MYRFLQ96LU7 910 aa13.57□□□□□ -0.24
TRAF4-209ENST00000473421 FNBP1Q96RU3 617 aa13.57□□□□□ -0.24
TRAF4-209ENST00000473421 KIF9Q9HAQ2 790 aa13.57□□□□□ -0.24
TRAF4-209ENST00000473421 DDX43Q9NXZ2 648 aaKnown RBP13.57□□□□□ -0.24
TRAF4-209ENST00000473421 MBD1Q9UIS9 605 aaPredicted RBP13.57□□□□□ -0.24
TRAF4-209ENST00000473421 AGO2Q9UKV8 859 aaKnown RBP13.57□□□□□ -0.24
TRAF4-209ENST00000473421 ADAMTS9Q9P2N4 1935 aa13.56□□□□□ -0.24
TRAF4-209ENST00000473421 TNRC6BQ9UPQ9 1833 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms