RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 STRNO43815 780 aa7.16□□□□□ -1.26
PTCD3-208ENST00000469585 PCDHGA12O60330 932 aa7.16□□□□□ -1.26
PTCD3-208ENST00000469585 S100BP04271 92 aaPredicted RBP7.16□□□□□ -1.26
PTCD3-208ENST00000469585 CFPP27918 469 aa7.16□□□□□ -1.26
PTCD3-208ENST00000469585 KIF5BP33176 963 aa7.16□□□□□ -1.26
PTCD3-208ENST00000469585 MCM5P33992 734 aa7.16□□□□□ -1.26
PTCD3-208ENST00000469585 MTNR1BP49286 362 aa7.16□□□□□ -1.26
PTCD3-208ENST00000469585 MRPL12P52815 198 aaKnown RBP7.16□□□□□ -1.26
PTCD3-208ENST00000469585 MRPS9P82933 396 aaKnown RBP7.16□□□□□ -1.26
PTCD3-208ENST00000469585 SRSF2Q01130 221 aaKnown RBP7.16□□□□□ -1.26
PTCD3-208ENST00000469585 KLRC3Q07444 240 aa7.16□□□□□ -1.26
PTCD3-208ENST00000469585 MCL1Q07820 350 aa7.16□□□□□ -1.26
PTCD3-208ENST00000469585 KCTD2Q14681 263 aa7.16□□□□□ -1.26
PTCD3-208ENST00000469585 WTAPQ15007 396 aa7.16□□□□□ -1.26
PTCD3-208ENST00000469585 PCBP2Q15366 365 aaKnown RBP eCLIP7.16□□□□□ -1.26
PTCD3-208ENST00000469585 PTPN21Q16825 1174 aa7.16□□□□□ -1.26
PTCD3-208ENST00000469585 ODR4Q5SWX8 454 aa7.16□□□□□ -1.26
PTCD3-208ENST00000469585 GPATCH4Q5T3I0 446 aaKnown RBP7.16□□□□□ -1.26
PTCD3-208ENST00000469585 SLFN13Q68D06 897 aa7.16□□□□□ -1.26
PTCD3-208ENST00000469585 TRIM68Q6AZZ1 485 aa7.16□□□□□ -1.26
PTCD3-208ENST00000469585 PGM2L1Q6PCE3 622 aa7.16□□□□□ -1.26
PTCD3-208ENST00000469585 CATSPERGQ6ZRH7 1159 aa7.16□□□□□ -1.26
PTCD3-208ENST00000469585 DPP9Q86TI2 863 aa7.16□□□□□ -1.26
PTCD3-208ENST00000469585 DGKHQ86XP1 1220 aa7.16□□□□□ -1.26
PTCD3-208ENST00000469585 CDYL2Q8N8U2 506 aa7.16□□□□□ -1.26
PTCD3-208ENST00000469585 GMCL1P1Q8NEA9 526 aa7.16□□□□□ -1.26
PTCD3-208ENST00000469585 ACER1Q8TDN7 264 aa7.16□□□□□ -1.26
PTCD3-208ENST00000469585 MBD6Q96DN6 1003 aa7.16□□□□□ -1.26
PTCD3-208ENST00000469585 SOX7Q9BT81 388 aa7.16□□□□□ -1.26
PTCD3-208ENST00000469585 QRSL1Q9H0R6 528 aaKnown RBP7.16□□□□□ -1.26
PTCD3-208ENST00000469585 TMEM168Q9H0V1 697 aa7.16□□□□□ -1.26
PTCD3-208ENST00000469585 TCP11L1Q9NUJ3 509 aa7.16□□□□□ -1.26
PTCD3-208ENST00000469585 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.16□□□□□ -1.26
PTCD3-208ENST00000469585 FBXO40Q9UH90 709 aa7.16□□□□□ -1.26
PTCD3-208ENST00000469585 NAP1L2Q9ULW6 460 aaPredicted RBP7.16□□□□□ -1.26
PTCD3-208ENST00000469585 PCDHGA9Q9Y5G4 932 aaKnown RBP7.16□□□□□ -1.26
PTCD3-208ENST00000469585 PCDHGA8Q9Y5G5 932 aa7.16□□□□□ -1.26
PTCD3-208ENST00000469585 PCDHGA7Q9Y5G6 932 aa7.16□□□□□ -1.26
PTCD3-208ENST00000469585 PCDHGA6Q9Y5G7 932 aa7.16□□□□□ -1.26
PTCD3-208ENST00000469585 PCDHGA3Q9Y5H0 932 aa7.16□□□□□ -1.26
PTCD3-208ENST00000469585 PCDHGA2Q9Y5H1 932 aa7.16□□□□□ -1.26
PTCD3-208ENST00000469585 RBM8AQ9Y5S9 174 aaKnown RBP7.16□□□□□ -1.26
PTCD3-208ENST00000469585 DDX60LQ5H9U9 1706 aaKnown RBP7.15□□□□□ -1.26
PTCD3-208ENST00000469585 C9orf118A6NHY6 69 aa7.15□□□□□ -1.26
PTCD3-208ENST00000469585 TMEM232C9JQI7 657 aa7.15□□□□□ -1.26
PTCD3-208ENST00000469585 EPB41L2O43491 1005 aaKnown RBP7.15□□□□□ -1.26
PTCD3-208ENST00000469585 PARP1P09874 1014 aaKnown RBP7.15□□□□□ -1.26
PTCD3-208ENST00000469585 CALM1P0DP23 149 aa7.15□□□□□ -1.26
PTCD3-208ENST00000469585 CALM2P0DP24 149 aa7.15□□□□□ -1.26
PTCD3-208ENST00000469585 CALM3P0DP25 149 aa7.15□□□□□ -1.26
PTCD3-208ENST00000469585 FCER1AP12319 257 aa7.15□□□□□ -1.26
PTCD3-208ENST00000469585 CAPN2P17655 700 aa7.15□□□□□ -1.26
PTCD3-208ENST00000469585 RGS2P41220 211 aa7.15□□□□□ -1.26
PTCD3-208ENST00000469585 GPR15P49685 360 aa7.15□□□□□ -1.26
PTCD3-208ENST00000469585 KCNQ1P51787 676 aa7.15□□□□□ -1.26
PTCD3-208ENST00000469585 SLURP1P55000 103 aa7.15□□□□□ -1.26
PTCD3-208ENST00000469585 LGALS4P56470 323 aa7.15□□□□□ -1.26
PTCD3-208ENST00000469585 ASPRV1Q53RT3 343 aa7.15□□□□□ -1.26
PTCD3-208ENST00000469585 TOR2AQ5JU69 321 aa7.15□□□□□ -1.26
PTCD3-208ENST00000469585 FAM83BQ5T0W9 1011 aa7.15□□□□□ -1.26
PTCD3-208ENST00000469585 C17orf99Q6UX52 265 aa7.15□□□□□ -1.26
PTCD3-208ENST00000469585 REXO1L1PQ8IX06 675 aa7.15□□□□□ -1.26
PTCD3-208ENST00000469585 CTCFLQ8NI51 663 aaPredicted RBP7.15□□□□□ -1.26
PTCD3-208ENST00000469585 PPP1R14CQ8TAE6 165 aa7.15□□□□□ -1.26
PTCD3-208ENST00000469585 GAB3Q8WWW8 586 aa7.15□□□□□ -1.26
PTCD3-208ENST00000469585 CHMP4CQ96CF2 233 aa7.15□□□□□ -1.26
PTCD3-208ENST00000469585 DYDC2Q96IM9 177 aa7.15□□□□□ -1.26
PTCD3-208ENST00000469585 P2RX7Q99572 595 aaKnown RBP7.15□□□□□ -1.26
PTCD3-208ENST00000469585 MROH8Q9H579 483 aa7.15□□□□□ -1.26
PTCD3-208ENST00000469585 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.15□□□□□ -1.26
PTCD3-208ENST00000469585 DNAJC28Q9NX36 388 aa7.15□□□□□ -1.26
PTCD3-208ENST00000469585 MKS1Q9NXB0 559 aa7.15□□□□□ -1.26
PTCD3-208ENST00000469585 KLHL42Q9P2K6 505 aa7.15□□□□□ -1.26
PTCD3-208ENST00000469585 SAE1Q9UBE0 346 aaPredicted RBP7.15□□□□□ -1.26
PTCD3-208ENST00000469585 EVLQ9UI08 416 aaPredicted RBP7.15□□□□□ -1.26
PTCD3-208ENST00000469585 ADAM29Q9UKF5 820 aa7.15□□□□□ -1.26
PTCD3-208ENST00000469585 USP18Q9UMW8 372 aa7.15□□□□□ -1.26
PTCD3-208ENST00000469585 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.14□□□□□ -1.27
PTCD3-208ENST00000469585 SEC24DO94855 1032 aaPredicted RBP7.14□□□□□ -1.27
PTCD3-208ENST00000469585 NDUFB10O96000 172 aa7.14□□□□□ -1.27
PTCD3-208ENST00000469585 HMGCRP04035 888 aa7.14□□□□□ -1.27
PTCD3-208ENST00000469585 CYP1A1P04798 512 aaPredicted RBP7.14□□□□□ -1.27
PTCD3-208ENST00000469585 AGXTP21549 392 aa7.14□□□□□ -1.27
PTCD3-208ENST00000469585 CSF2RBP32927 897 aa7.14□□□□□ -1.27
PTCD3-208ENST00000469585 GNAQP50148 359 aa7.14□□□□□ -1.27
PTCD3-208ENST00000469585 STAT5BP51692 787 aa7.14□□□□□ -1.27
PTCD3-208ENST00000469585 RRP1BQ14684 758 aaKnown RBP7.14□□□□□ -1.27
PTCD3-208ENST00000469585 MUM1Q2TAK8 710 aa7.14□□□□□ -1.27
PTCD3-208ENST00000469585 MFSD14CQ5VZR4 134 aa7.14□□□□□ -1.27
PTCD3-208ENST00000469585 LARP4Q71RC2 724 aaKnown RBP eCLIP7.14□□□□□ -1.27
PTCD3-208ENST00000469585 PLEKHH3Q7Z736 793 aa7.14□□□□□ -1.27
PTCD3-208ENST00000469585 RAVER1Q8IY67 606 aaKnown RBP7.14□□□□□ -1.27
PTCD3-208ENST00000469585 LRRC56Q8IYG6 542 aaPredicted RBP7.14□□□□□ -1.27
PTCD3-208ENST00000469585 KLHL36Q8N4N3 616 aa7.14□□□□□ -1.27
PTCD3-208ENST00000469585 OR14C36Q8NHC7 312 aa7.14□□□□□ -1.27
PTCD3-208ENST00000469585 TSPEARQ8WU66 669 aa7.14□□□□□ -1.27
PTCD3-208ENST00000469585 AUTS2Q8WXX7 1259 aa7.14□□□□□ -1.27
PTCD3-208ENST00000469585 MAP4K1Q92918 833 aa7.14□□□□□ -1.27
PTCD3-208ENST00000469585 NKD2Q969F2 451 aaPredicted RBP7.14□□□□□ -1.27
PTCD3-208ENST00000469585 HIST1H2AHQ96KK5 128 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms