RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 RAP1GAPP47736 663 aa15.76■□□□□ 0.11
TMEM39A-205ENST00000468676 CYP27A1Q02318 531 aa15.76■□□□□ 0.11
TMEM39A-205ENST00000468676 KCNH2Q12809 1159 aa15.76■□□□□ 0.11
TMEM39A-205ENST00000468676 MDH1BQ5I0G3 518 aa15.76■□□□□ 0.11
TMEM39A-205ENST00000468676 PRSS36Q5K4E3 855 aa15.76■□□□□ 0.11
TMEM39A-205ENST00000468676 MTSS1LQ765P7 747 aa15.76■□□□□ 0.11
TMEM39A-205ENST00000468676 NPAS3Q8IXF0 933 aa15.76■□□□□ 0.11
TMEM39A-205ENST00000468676 CRYBG2Q8N1P7 616 aa15.76■□□□□ 0.11
TMEM39A-205ENST00000468676 MYLPFQ96A32 169 aa15.76■□□□□ 0.11
TMEM39A-205ENST00000468676 PCED1BQ96HM7 432 aa15.76■□□□□ 0.11
TMEM39A-205ENST00000468676 MED15Q96RN5 788 aa15.76■□□□□ 0.11
TMEM39A-205ENST00000468676 ELOVL4Q9GZR5 314 aa15.76■□□□□ 0.11
TMEM39A-205ENST00000468676 SDCBP2Q9H190 292 aa15.76■□□□□ 0.11
TMEM39A-205ENST00000468676 ANO10Q9NW15 660 aa15.76■□□□□ 0.11
TMEM39A-205ENST00000468676 MUTYHQ9UIF7 546 aa15.76■□□□□ 0.11
TMEM39A-205ENST00000468676 SORCS3Q9UPU3 1222 aa15.76■□□□□ 0.11
TMEM39A-205ENST00000468676 PTPRDP23468 1912 aa15.76■□□□□ 0.11
TMEM39A-205ENST00000468676 TRIOO75962 3097 aa15.76■□□□□ 0.11
TMEM39A-205ENST00000468676 ANHXE9PGG2 379 aa15.75■□□□□ 0.11
TMEM39A-205ENST00000468676 TRIM66O15016 1216 aa15.75■□□□□ 0.11
TMEM39A-205ENST00000468676 AFPP02771 609 aaKnown RBP15.75■□□□□ 0.11
TMEM39A-205ENST00000468676 PRKCSHP14314 528 aaPredicted RBP15.75■□□□□ 0.11
TMEM39A-205ENST00000468676 BDNFP23560 247 aa15.75■□□□□ 0.11
TMEM39A-205ENST00000468676 TBXAS1P24557 533 aaPredicted RBP15.75■□□□□ 0.11
TMEM39A-205ENST00000468676 CDC25CP30307 473 aa15.75■□□□□ 0.11
TMEM39A-205ENST00000468676 NDST1P52848 882 aa15.75■□□□□ 0.11
TMEM39A-205ENST00000468676 YWHAEP62258 255 aaKnown RBP15.75■□□□□ 0.11
TMEM39A-205ENST00000468676 MTMR3Q13615 1198 aa15.75■□□□□ 0.11
TMEM39A-205ENST00000468676 SLC5A9Q2M3M2 681 aa15.75■□□□□ 0.11
TMEM39A-205ENST00000468676 TMC8Q8IU68 726 aa15.75■□□□□ 0.11
TMEM39A-205ENST00000468676 UBALD2Q8IYN6 164 aa15.75■□□□□ 0.11
TMEM39A-205ENST00000468676 HS6ST3Q8IZP7 471 aa15.75■□□□□ 0.11
TMEM39A-205ENST00000468676 ELMO3Q96BJ8 720 aa15.75■□□□□ 0.11
TMEM39A-205ENST00000468676 SPATA17Q96L03 361 aa15.75■□□□□ 0.11
TMEM39A-205ENST00000468676 CNOT6LQ96LI5 555 aaKnown RBP15.75■□□□□ 0.11
TMEM39A-205ENST00000468676 NT5C1AQ9BXI3 368 aa15.75■□□□□ 0.11
TMEM39A-205ENST00000468676 LRRC3Q9BY71 257 aa15.75■□□□□ 0.11
TMEM39A-205ENST00000468676 DPEP3Q9H4B8 488 aa15.75■□□□□ 0.11
TMEM39A-205ENST00000468676 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.75■□□□□ 0.11
TMEM39A-205ENST00000468676 EHD2Q9NZN4 543 aa15.75■□□□□ 0.11
TMEM39A-205ENST00000468676 UXTQ9UBK9 157 aaPredicted RBP15.75■□□□□ 0.11
TMEM39A-205ENST00000468676 ZMYM5Q9UJ78 669 aa15.75■□□□□ 0.11
TMEM39A-205ENST00000468676 NME7Q9Y5B8 376 aa15.75■□□□□ 0.11
TMEM39A-205ENST00000468676 CILPO75339 1184 aa15.74■□□□□ 0.11
TMEM39A-205ENST00000468676 ANXA13P27216 316 aa15.74■□□□□ 0.11
TMEM39A-205ENST00000468676 GRIK1P39086 918 aa15.74■□□□□ 0.11
TMEM39A-205ENST00000468676 CDR1P51861 262 aa15.74■□□□□ 0.11
TMEM39A-205ENST00000468676 TDGQ13569 410 aa15.74■□□□□ 0.11
TMEM39A-205ENST00000468676 STX1AQ16623 288 aa15.74■□□□□ 0.11
TMEM39A-205ENST00000468676 DDR2Q16832 855 aa15.74■□□□□ 0.11
TMEM39A-205ENST00000468676 ARHGAP15Q53QZ3 475 aa15.74■□□□□ 0.11
TMEM39A-205ENST00000468676 ACOT1Q86TX2 421 aa15.74■□□□□ 0.11
TMEM39A-205ENST00000468676 SCN4BQ8IWT1 228 aa15.74■□□□□ 0.11
TMEM39A-205ENST00000468676 GIPC2Q8TF65 315 aa15.74■□□□□ 0.11
TMEM39A-205ENST00000468676 ING5Q8WYH8 240 aa15.74■□□□□ 0.11
TMEM39A-205ENST00000468676 EDAQ92838 391 aa15.74■□□□□ 0.11
TMEM39A-205ENST00000468676 KHSRPQ92945 711 aaKnown RBP eCLIP15.74■□□□□ 0.112e-7■■□□□ 13.8
TMEM39A-205ENST00000468676 TCEAL4Q96EI5 215 aa15.74■□□□□ 0.11
TMEM39A-205ENST00000468676 TRMT2BQ96GJ1 504 aaKnown RBP15.74■□□□□ 0.11
TMEM39A-205ENST00000468676 C8orf48Q96LL4 319 aa15.74■□□□□ 0.11
TMEM39A-205ENST00000468676 GCNAQ96QF7 691 aa15.74■□□□□ 0.11
TMEM39A-205ENST00000468676 LPIN3Q9BQK8 851 aa15.74■□□□□ 0.11
TMEM39A-205ENST00000468676 C1QTNF1Q9BXJ1 281 aa15.74■□□□□ 0.11
TMEM39A-205ENST00000468676 B3GNT5Q9BYG0 378 aa15.74■□□□□ 0.11
TMEM39A-205ENST00000468676 KCNK12Q9HB15 430 aa15.74■□□□□ 0.11
TMEM39A-205ENST00000468676 LRRN2O75325 713 aa15.73■□□□□ 0.11
TMEM39A-205ENST00000468676 NOL4O94818 638 aa15.73■□□□□ 0.11
TMEM39A-205ENST00000468676 CEBPBP17676 345 aa15.73■□□□□ 0.11
TMEM39A-205ENST00000468676 CCR2P41597 374 aa15.73■□□□□ 0.11
TMEM39A-205ENST00000468676 MTIF2P46199 727 aaKnown RBP15.73■□□□□ 0.11
TMEM39A-205ENST00000468676 ZXDAP98168 799 aa15.73■□□□□ 0.11
TMEM39A-205ENST00000468676 CUL2Q13617 745 aa15.73■□□□□ 0.11
TMEM39A-205ENST00000468676 HTR4Q13639 388 aa15.73■□□□□ 0.11
TMEM39A-205ENST00000468676 CCDC142Q17RM4 750 aa15.73■□□□□ 0.11
TMEM39A-205ENST00000468676 IRF2BP1Q8IU81 584 aa15.73■□□□□ 0.11
TMEM39A-205ENST00000468676 CREBRFQ8IUR6 639 aa15.73■□□□□ 0.11
TMEM39A-205ENST00000468676 SHKBP1Q8TBC3 707 aa15.73■□□□□ 0.11
TMEM39A-205ENST00000468676 ENOX1Q8TC92 643 aaKnown RBP15.73■□□□□ 0.11
TMEM39A-205ENST00000468676 TATDN2Q93075 761 aa15.73■□□□□ 0.11
TMEM39A-205ENST00000468676 MCRS1Q96EZ8 462 aa15.73■□□□□ 0.11
TMEM39A-205ENST00000468676 MYRFLQ96LU7 910 aa15.73■□□□□ 0.11
TMEM39A-205ENST00000468676 NT5C1BQ96P26 610 aa15.73■□□□□ 0.11
TMEM39A-205ENST00000468676 MED10Q9BTT4 135 aa15.73■□□□□ 0.11
TMEM39A-205ENST00000468676 CISHQ9NSE2 258 aa15.73■□□□□ 0.11
TMEM39A-205ENST00000468676 A0A1W2PRU2 124 aa15.72■□□□□ 0.11
TMEM39A-205ENST00000468676 SLC38A8A6NNN8 435 aa15.72■□□□□ 0.11
TMEM39A-205ENST00000468676 SOBPA7XYQ1 873 aa15.72■□□□□ 0.11
TMEM39A-205ENST00000468676 MOSPD3O75425 235 aa15.72■□□□□ 0.11
TMEM39A-205ENST00000468676 ASGR2P07307 311 aa15.72■□□□□ 0.11
TMEM39A-205ENST00000468676 HMGA1P17096 107 aaKnown RBP15.72■□□□□ 0.11
TMEM39A-205ENST00000468676 CD58P19256 250 aa15.72■□□□□ 0.11
TMEM39A-205ENST00000468676 GABRR2P28476 465 aa15.72■□□□□ 0.11
TMEM39A-205ENST00000468676 KLHL40Q2TBA0 621 aa15.72■□□□□ 0.11
TMEM39A-205ENST00000468676 GAREM2Q75VX8 874 aa15.72■□□□□ 0.11
TMEM39A-205ENST00000468676 EHBP1Q8NDI1 1231 aa15.72■□□□□ 0.11
TMEM39A-205ENST00000468676 GPR152Q8TDT2 470 aa15.72■□□□□ 0.11
TMEM39A-205ENST00000468676 SMARCD1Q96GM5 515 aa15.72■□□□□ 0.11
TMEM39A-205ENST00000468676 ATXN3LQ9H3M9 355 aa15.72■□□□□ 0.11
TMEM39A-205ENST00000468676 EPHX3Q9H6B9 360 aa15.72■□□□□ 0.11
TMEM39A-205ENST00000468676 ZNF334Q9HCZ1 680 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms