RNA–Protein interactions for RNA: ENST00000466141.1

RPUSD3-212, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-212ENST00000466141 PTPRHQ9HD43 1115 aa7.8□□□□□ -1.16
RPUSD3-212ENST00000466141 TUFT1Q9NNX1 390 aa7.8□□□□□ -1.16
RPUSD3-212ENST00000466141 XPNPEP1Q9NQW7 623 aa7.8□□□□□ -1.16
RPUSD3-212ENST00000466141 NRBP2Q9NSY0 501 aa7.8□□□□□ -1.16
RPUSD3-212ENST00000466141 SIRPGQ9P1W8 387 aa7.8□□□□□ -1.16
RPUSD3-212ENST00000466141 NCDNQ9UBB6 729 aa7.8□□□□□ -1.16
RPUSD3-212ENST00000466141 WNT16Q9UBV4 365 aa7.8□□□□□ -1.16
RPUSD3-212ENST00000466141 TRAF3IP3Q9Y228 551 aa7.8□□□□□ -1.16
RPUSD3-212ENST00000466141 CARD8Q9Y2G2 431 aa7.8□□□□□ -1.16
RPUSD3-212ENST00000466141 PDCD11Q14690 1871 aaKnown RBP7.8□□□□□ -1.16
RPUSD3-212ENST00000466141 TRIP11Q15643 1979 aa7.8□□□□□ -1.16
RPUSD3-212ENST00000466141 LRRC10BA6NIK2 292 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 DDX11L8A8MPP1 907 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 PP2D1A8MPX8 630 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 PRRT4C9JH25 899 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 ZBTB39O15060 712 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 SART1O43290 800 aaKnown RBP7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 MAP3K7O43318 606 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 GAS2O43903 313 aaKnown RBP7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 MAFO75444 373 aaPredicted RBP7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 CSDE1O75534 798 aaKnown RBP7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 CTSAP10619 480 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 MUTP22033 750 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 GBP2P32456 591 aaPredicted RBP7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 ALDH7A1P49419 539 aaKnown RBP7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 GPC3P51654 580 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 CCNHP51946 323 aaPredicted RBP7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 NLRP11P59045 1033 aaKnown RBP7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 BPIFB3P59826 476 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 DAB2P98082 770 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 TUBA3CQ13748 450 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 PKP1Q13835 747 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 EMC2Q15006 297 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 PTPAQ15257 358 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 SWI5Q1ZZU3 235 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 SMUG1Q53HV7 270 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 VARS2Q5ST30 1063 aaKnown RBP7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 ARL6IP4Q66PJ3 421 aaKnown RBP7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 HAUS3Q68CZ6 603 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 CAPRIN2Q6IMN6 1127 aaKnown RBP7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 FAM173BQ6P4H8 233 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 ZNF598Q86UK7 904 aaKnown RBP7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 CATSPER3Q86XQ3 398 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 TPH2Q8IWU9 490 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 SLC44A3Q8N4M1 653 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 METTL13Q8N6R0 699 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 GPT2Q8TD30 523 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 NLRP7Q8WX94 980 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 LZICQ8WZA0 190 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 LPPQ93052 612 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 HPS3Q969F9 1004 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 SH3KBP1Q96B97 665 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 IGSF21Q96ID5 467 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 MOGAT1Q96PD6 335 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 MYADMQ96S97 322 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 SERINC2Q96SA4 455 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 MTRQ99707 1265 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 CORO1BQ9BR76 489 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 TRIM8Q9BZR9 551 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 ARHGEF3Q9NR81 526 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 ANKEF1Q9NU02 776 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 CNTN3Q9P232 1028 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 IGSF9Q9P2J2 1179 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 FBXL5Q9UKA1 691 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 AKT3Q9Y243 479 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 TMED5Q9Y3A6 229 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 SIT1Q9Y3P8 196 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 SPO11Q9Y5K1 396 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 MRFAP1Q9Y605 127 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 TDRD15B5MCY1 1934 aaKnown RBP7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 CITO14578 2027 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 CACNA1IQ9P0X4 2223 aa7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 FASNP49327 2511 aaKnown RBP7.79□□□□□ -1.16
RPUSD3-212ENST00000466141 SETXQ7Z333 2677 aaKnown RBP7.78□□□□□ -1.16
RPUSD3-212ENST00000466141 MEIS3P2A8K0S8 358 aa7.78□□□□□ -1.16
RPUSD3-212ENST00000466141 SKAP2O75563 359 aaPredicted RBP7.78□□□□□ -1.16
RPUSD3-212ENST00000466141 BMP15O95972 392 aa7.78□□□□□ -1.16
RPUSD3-212ENST00000466141 CNPP09543 421 aaKnown RBP7.78□□□□□ -1.16
RPUSD3-212ENST00000466141 SRFP11831 508 aa7.78□□□□□ -1.16
RPUSD3-212ENST00000466141 NCAM1P13591 858 aa7.78□□□□□ -1.16
RPUSD3-212ENST00000466141 DARSP14868 501 aaKnown RBP7.78□□□□□ -1.16
RPUSD3-212ENST00000466141 IDO1P14902 403 aa7.78□□□□□ -1.16
RPUSD3-212ENST00000466141 ATF4P18848 351 aaPredicted RBP7.78□□□□□ -1.16
RPUSD3-212ENST00000466141 MCM3P25205 808 aa7.78□□□□□ -1.16
RPUSD3-212ENST00000466141 KLRC2P26717 231 aa7.78□□□□□ -1.16
RPUSD3-212ENST00000466141 TMOD1P28289 359 aa7.78□□□□□ -1.16
RPUSD3-212ENST00000466141 GCKP35557 465 aa7.78□□□□□ -1.16
RPUSD3-212ENST00000466141 CDKN1CP49918 316 aaPredicted RBP7.78□□□□□ -1.16
RPUSD3-212ENST00000466141 MXI1P50539 228 aa7.78□□□□□ -1.16
RPUSD3-212ENST00000466141 PEX5P50542 639 aa7.78□□□□□ -1.16
RPUSD3-212ENST00000466141 CLCN4P51793 760 aa7.78□□□□□ -1.16
RPUSD3-212ENST00000466141 POLGP54098 1239 aaPredicted RBP7.78□□□□□ -1.16
RPUSD3-212ENST00000466141 AP2B1P63010 937 aa7.78□□□□□ -1.16
RPUSD3-212ENST00000466141 RACK1P63244 317 aaKnown RBP7.78□□□□□ -1.16
RPUSD3-212ENST00000466141 TPM4P67936 248 aa7.78□□□□□ -1.16
RPUSD3-212ENST00000466141 GRIN1Q05586 938 aa7.78□□□□□ -1.16
RPUSD3-212ENST00000466141 DMPKQ09013 629 aa7.78□□□□□ -1.16
RPUSD3-212ENST00000466141 INAQ16352 499 aa7.78□□□□□ -1.16
RPUSD3-212ENST00000466141 XKR9Q5GH70 373 aa7.78□□□□□ -1.16
RPUSD3-212ENST00000466141 HYIQ5T013 277 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms