RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 NXPH1P58417 271 aa5.04□□□□□ -1.6
CLK1-208ENST00000464454 ITIH3Q06033 890 aa5.04□□□□□ -1.6
CLK1-208ENST00000464454 FSTL1Q12841 308 aa5.04□□□□□ -1.6
CLK1-208ENST00000464454 RAB32Q13637 225 aa5.04□□□□□ -1.6
CLK1-208ENST00000464454 IQCB1Q15051 598 aa5.04□□□□□ -1.6
CLK1-208ENST00000464454 SF3B3Q15393 1217 aaKnown RBP5.04□□□□□ -1.6
CLK1-208ENST00000464454 ERCC6LQ2NKX8 1250 aa5.04□□□□□ -1.6
CLK1-208ENST00000464454 NBPF8Q3BBV2 869 aa5.04□□□□□ -1.6
CLK1-208ENST00000464454 SFRP4Q6FHJ7 346 aaPredicted RBP5.04□□□□□ -1.6
CLK1-208ENST00000464454 B3GALNT2Q8NCR0 500 aa5.04□□□□□ -1.6
CLK1-208ENST00000464454 CHFRQ96EP1 664 aa5.04□□□□□ -1.6
CLK1-208ENST00000464454 PGBD1Q96JS3 809 aa5.04□□□□□ -1.6
CLK1-208ENST00000464454 NELL2Q99435 816 aa5.04□□□□□ -1.6
CLK1-208ENST00000464454 P2RX7Q99572 595 aaKnown RBP5.04□□□□□ -1.6
CLK1-208ENST00000464454 DPH1Q9BZG8 443 aa5.04□□□□□ -1.6
CLK1-208ENST00000464454 CPNE7Q9UBL6 633 aa5.04□□□□□ -1.6
CLK1-208ENST00000464454 EPN1Q9Y6I3 576 aaPredicted RBP5.04□□□□□ -1.6
CLK1-208ENST00000464454 ZKSCAN1P17029 563 aaPredicted RBP5.03□□□□□ -1.6
CLK1-208ENST00000464454 CHRM3P20309 590 aa5.03□□□□□ -1.6
CLK1-208ENST00000464454 GATA3P23771 443 aa5.03□□□□□ -1.6
CLK1-208ENST00000464454 CD6P30203 668 aa5.03□□□□□ -1.6
CLK1-208ENST00000464454 FOLR3P41439 243 aa5.03□□□□□ -1.6
CLK1-208ENST00000464454 PRIM2P49643 509 aa5.03□□□□□ -1.6
CLK1-208ENST00000464454 VWA1Q6PCB0 445 aa5.03□□□□□ -1.6
CLK1-208ENST00000464454 TOGARAM2Q6ZUX3 1019 aa5.03□□□□□ -1.6
CLK1-208ENST00000464454 MORC4Q8TE76 937 aa5.03□□□□□ -1.6
CLK1-208ENST00000464454 SLC46A1Q96NT5 459 aa5.03□□□□□ -1.6
CLK1-208ENST00000464454 UNKQ9C0B0 810 aaKnown RBP5.03□□□□□ -1.6
CLK1-208ENST00000464454 LRIT1Q9P2V4 623 aa5.03□□□□□ -1.6
CLK1-208ENST00000464454 XPR1Q9UBH6 696 aa5.03□□□□□ -1.6
CLK1-208ENST00000464454 CORO2BQ9UQ03 480 aa5.03□□□□□ -1.6
CLK1-208ENST00000464454 SHOC2Q9UQ13 582 aa5.03□□□□□ -1.6
CLK1-208ENST00000464454 CCDC151A5D8V7 595 aa5.02□□□□□ -1.61
CLK1-208ENST00000464454 RASA4BC9J798 803 aa5.02□□□□□ -1.61
CLK1-208ENST00000464454 BTN3A1O00481 513 aa5.02□□□□□ -1.61
CLK1-208ENST00000464454 YY2O15391 372 aa5.02□□□□□ -1.61
CLK1-208ENST00000464454 MPPED1O15442 326 aa5.02□□□□□ -1.61
CLK1-208ENST00000464454 RASA4O43374 803 aa5.02□□□□□ -1.61
CLK1-208ENST00000464454 PPP3CBP16298 524 aa5.02□□□□□ -1.61
CLK1-208ENST00000464454 PXNP49023 591 aaPredicted RBP5.02□□□□□ -1.61
CLK1-208ENST00000464454 SLC11A2P49281 568 aa5.02□□□□□ -1.61
CLK1-208ENST00000464454 TOB1P50616 345 aaPredicted RBP5.02□□□□□ -1.61
CLK1-208ENST00000464454 CASP5P51878 434 aa5.02□□□□□ -1.61
CLK1-208ENST00000464454 UCP3P55916 312 aa5.02□□□□□ -1.61
CLK1-208ENST00000464454 MRPS35P82673 323 aaKnown RBP5.02□□□□□ -1.61
CLK1-208ENST00000464454 ZNF543Q08ER8 600 aa5.02□□□□□ -1.61
CLK1-208ENST00000464454 SLC13A2Q13183 592 aa5.02□□□□□ -1.61
CLK1-208ENST00000464454 RBM20Q5T481 1227 aaKnown RBP5.02□□□□□ -1.61
CLK1-208ENST00000464454 TEDDM1Q5T9Z0 273 aa5.02□□□□□ -1.61
CLK1-208ENST00000464454 SESTD1Q86VW0 696 aa5.02□□□□□ -1.61
CLK1-208ENST00000464454 SPICE1Q8N0Z3 855 aa5.02□□□□□ -1.61
CLK1-208ENST00000464454 DNAJC5GQ8N7S2 189 aa5.02□□□□□ -1.61
CLK1-208ENST00000464454 SLC30A5Q8TAD4 765 aa5.02□□□□□ -1.61
CLK1-208ENST00000464454 NMD3Q96D46 503 aaKnown RBP5.02□□□□□ -1.61
CLK1-208ENST00000464454 FBXL20Q96IG2 436 aa5.02□□□□□ -1.61
CLK1-208ENST00000464454 MSLNLQ96KJ4 702 aa5.02□□□□□ -1.61
CLK1-208ENST00000464454 KRTAP9-8Q9BYQ0 159 aa5.02□□□□□ -1.61
CLK1-208ENST00000464454 TPSD1Q9BZJ3 242 aa5.02□□□□□ -1.61
CLK1-208ENST00000464454 ZNF518BQ9C0D4 1074 aa5.02□□□□□ -1.61
CLK1-208ENST00000464454 TTYH3Q9C0H2 523 aa5.02□□□□□ -1.61
CLK1-208ENST00000464454 SMOC2Q9H3U7 446 aa5.02□□□□□ -1.61
CLK1-208ENST00000464454 PNPLA8Q9NP80 782 aa5.02□□□□□ -1.61
CLK1-208ENST00000464454 SACM1LQ9NTJ5 587 aa5.02□□□□□ -1.61
CLK1-208ENST00000464454 MRPS18AQ9NVS2 196 aaKnown RBP5.02□□□□□ -1.61
CLK1-208ENST00000464454 ZSCAN32Q9NX65 697 aa5.02□□□□□ -1.61
CLK1-208ENST00000464454 AFF4Q9UHB7 1163 aaKnown RBP5.02□□□□□ -1.61
CLK1-208ENST00000464454 DAAM1Q9Y4D1 1078 aa5.02□□□□□ -1.61
CLK1-208ENST00000464454 DMRT1Q9Y5R6 373 aa5.02□□□□□ -1.61
CLK1-208ENST00000464454 A0A087WWL8 130 aa5.01□□□□□ -1.61
CLK1-208ENST00000464454 PLEKHD1A6NEE1 506 aa5.01□□□□□ -1.61
CLK1-208ENST00000464454 KPNA5O15131 536 aa5.01□□□□□ -1.61
CLK1-208ENST00000464454 IL18RAPO95256 599 aa5.01□□□□□ -1.61
CLK1-208ENST00000464454 SERPINB3P29508 390 aa5.01□□□□□ -1.61
CLK1-208ENST00000464454 PPIFP30405 207 aaKnown RBP5.01□□□□□ -1.61
CLK1-208ENST00000464454 LRPAP1P30533 357 aa5.01□□□□□ -1.61
CLK1-208ENST00000464454 MPLP40238 635 aa5.01□□□□□ -1.61
CLK1-208ENST00000464454 BTKQ06187 659 aa5.01□□□□□ -1.61
CLK1-208ENST00000464454 DAG1Q14118 895 aa5.01□□□□□ -1.61
CLK1-208ENST00000464454 PTPRRQ15256 657 aa5.01□□□□□ -1.61
CLK1-208ENST00000464454 TMEM108Q6UXF1 575 aa5.01□□□□□ -1.61
CLK1-208ENST00000464454 TOR1AIP2Q8NFQ8 470 aa5.01□□□□□ -1.61
CLK1-208ENST00000464454 ACTRT2Q8TDY3 377 aa5.01□□□□□ -1.61
CLK1-208ENST00000464454 LPIN2Q92539 896 aa5.01□□□□□ -1.61
CLK1-208ENST00000464454 FAM136AQ96C01 138 aa5.01□□□□□ -1.61
CLK1-208ENST00000464454 SGCZQ96LD1 299 aa5.01□□□□□ -1.61
CLK1-208ENST00000464454 RIPOR3Q96MK2 946 aa5.01□□□□□ -1.61
CLK1-208ENST00000464454 ALG8Q9BVK2 526 aa5.01□□□□□ -1.61
CLK1-208ENST00000464454 IKZF4Q9H2S9 585 aa5.01□□□□□ -1.61
CLK1-208ENST00000464454 MYH16Q9H6N6 1097 aa5.01□□□□□ -1.61
CLK1-208ENST00000464454 STARD7Q9NQZ5 370 aa5.01□□□□□ -1.61
CLK1-208ENST00000464454 TAGLN3Q9UI15 199 aa5.01□□□□□ -1.61
CLK1-208ENST00000464454 PADI4Q9UM07 663 aa5.01□□□□□ -1.61
CLK1-208ENST00000464454 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.01□□□□□ -1.61
CLK1-208ENST00000464454 RIPOR2Q9Y4F9 1068 aa5.01□□□□□ -1.61
CLK1-208ENST00000464454 DCLK1O15075 740 aa5□□□□□ -1.61
CLK1-208ENST00000464454 EIF3JO75822 258 aaKnown RBP5□□□□□ -1.61
CLK1-208ENST00000464454 SETSIPP0DME0 302 aa5□□□□□ -1.61
CLK1-208ENST00000464454 STT3AP46977 705 aa5□□□□□ -1.61
CLK1-208ENST00000464454 FOXI1Q12951 378 aa5□□□□□ -1.61
CLK1-208ENST00000464454 CTBP1Q13363 440 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms