RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 UBXN11Q5T124 520 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 AGBL2Q5U5Z8 902 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 NOTUMQ6P988 496 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 TRIM72Q6ZMU5 477 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 TMC3Q7Z5M5 1100 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 ZBTB8OSQ8IWT0 167 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 ARFGAP2Q8N6H7 521 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 FBXO22Q8NEZ5 403 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 CCDC127Q96BQ5 260 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 CASD1Q96PB1 797 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 NUP85Q9BW27 656 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 PLVAPQ9BX97 442 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 RNF19AQ9NV58 838 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 PARP2Q9UGN5 583 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 CNTN6Q9UQ52 1028 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 PLAAQ9Y263 795 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 PCDHB2Q9Y5E7 798 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 GOLGA6L10A6NI86 522 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 TBKBP1A7MCY6 615 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 ACKR2O00590 384 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 DAPK3O43293 454 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 KRT14P02533 472 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 C4BPAP04003 597 aaKnown RBP10.5□□□□□ -0.73
PTPRD-207ENST00000463477 UNGP13051 313 aaPredicted RBP10.5□□□□□ -0.73
PTPRD-207ENST00000463477 ARF4P18085 180 aaPredicted RBP10.5□□□□□ -0.73
PTPRD-207ENST00000463477 IBSPP21815 317 aaPredicted RBP10.5□□□□□ -0.73
PTPRD-207ENST00000463477 IGFBP4P22692 258 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 PTGIRP43119 386 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 FNTAP49354 379 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 GATMP50440 423 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 MAPK6Q16659 721 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 PTPROQ16827 1216 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 DEPTORQ8TB45 409 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 SLCO2A1Q92959 643 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 ZNF653Q96CK0 615 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 PGBD4Q96DM1 585 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 BICD1Q96G01 975 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 VCPIP1Q96JH7 1222 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 CCDC113Q9H0I3 377 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 NEUROG2Q9H2A3 272 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 ZDHHC18Q9NUE0 388 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 MTUS1Q9ULD2 1270 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 MTCH2Q9Y6C9 303 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 MRPL42Q9Y6G3 142 aaKnown RBP10.5□□□□□ -0.73
PTPRD-207ENST00000463477 PRRC2BQ5JSZ5 2229 aaKnown RBP10.49□□□□□ -0.73
PTPRD-207ENST00000463477 K7ERI5 159 aa10.49□□□□□ -0.73
PTPRD-207ENST00000463477 NR1D1P20393 614 aa10.49□□□□□ -0.73
PTPRD-207ENST00000463477 SLC1A1P43005 524 aa10.49□□□□□ -0.73
PTPRD-207ENST00000463477 AP3M2P53677 418 aa10.49□□□□□ -0.73
PTPRD-207ENST00000463477 PTP4A2Q12974 167 aa10.49□□□□□ -0.73
PTPRD-207ENST00000463477 MESDQ14696 234 aa10.49□□□□□ -0.73
PTPRD-207ENST00000463477 PAN2Q504Q3 1202 aaKnown RBP10.49□□□□□ -0.73
PTPRD-207ENST00000463477 WDR44Q5JSH3 913 aa10.49□□□□□ -0.73
PTPRD-207ENST00000463477 CLLU1OSQ5K130 101 aa10.49□□□□□ -0.73
PTPRD-207ENST00000463477 DDX42Q86XP3 938 aaKnown RBP eCLIP10.49□□□□□ -0.73
PTPRD-207ENST00000463477 JAMLQ86YT9 394 aa10.49□□□□□ -0.73
PTPRD-207ENST00000463477 ABI1Q8IZP0 508 aa10.49□□□□□ -0.73
PTPRD-207ENST00000463477 PRELID2Q8N945 189 aa10.49□□□□□ -0.73
PTPRD-207ENST00000463477 MAFAQ8NHW3 353 aaPredicted RBP10.49□□□□□ -0.73
PTPRD-207ENST00000463477 MAIP1Q8WWC4 291 aa10.49□□□□□ -0.73
PTPRD-207ENST00000463477 ZNF516Q92618 1163 aa10.49□□□□□ -0.73
PTPRD-207ENST00000463477 KRT35Q92764 455 aa10.49□□□□□ -0.73
PTPRD-207ENST00000463477 TATDN2Q93075 761 aa10.49□□□□□ -0.73
PTPRD-207ENST00000463477 CPB2Q96IY4 423 aa10.49□□□□□ -0.73
PTPRD-207ENST00000463477 FMO2Q99518 471 aa10.49□□□□□ -0.73
PTPRD-207ENST00000463477 POP1Q99575 1024 aaKnown RBP10.49□□□□□ -0.73
PTPRD-207ENST00000463477 FAM213AQ9BRX8 229 aa10.49□□□□□ -0.73
PTPRD-207ENST00000463477 TSPYL1Q9H0U9 437 aa10.49□□□□□ -0.73
PTPRD-207ENST00000463477 UBN1Q9NPG3 1134 aa10.49□□□□□ -0.73
PTPRD-207ENST00000463477 TOPORSQ9NS56 1045 aaPredicted RBP10.49□□□□□ -0.73
PTPRD-207ENST00000463477 AGO2Q9UKV8 859 aaKnown RBP10.49□□□□□ -0.73
PTPRD-207ENST00000463477 NR2E1Q9Y466 385 aa10.49□□□□□ -0.73
PTPRD-207ENST00000463477 A0A0B4J269 797 aa10.48□□□□□ -0.73
PTPRD-207ENST00000463477 B4GALT5O43286 388 aa10.48□□□□□ -0.73
PTPRD-207ENST00000463477 HLA-DRAP01903 254 aa10.48□□□□□ -0.73
PTPRD-207ENST00000463477 CYP1A1P04798 512 aaPredicted RBP10.48□□□□□ -0.73
PTPRD-207ENST00000463477 NUDT17P0C025 328 aa10.48□□□□□ -0.73
PTPRD-207ENST00000463477 MYZAPP0CAP1 466 aa10.48□□□□□ -0.73
PTPRD-207ENST00000463477 DLATP10515 647 aaKnown RBP10.48□□□□□ -0.73
PTPRD-207ENST00000463477 TBXAS1P24557 533 aaPredicted RBP10.48□□□□□ -0.73
PTPRD-207ENST00000463477 CTNNB1P35222 781 aa10.48□□□□□ -0.73
PTPRD-207ENST00000463477 RWDD2BP57060 319 aa10.48□□□□□ -0.73
PTPRD-207ENST00000463477 CENPCQ03188 943 aa10.48□□□□□ -0.73
PTPRD-207ENST00000463477 ZNF844Q08AG5 666 aa10.48□□□□□ -0.73
PTPRD-207ENST00000463477 GPM6BQ13491 265 aa10.48□□□□□ -0.73
PTPRD-207ENST00000463477 CEP85LQ5SZL2 805 aa10.48□□□□□ -0.73
PTPRD-207ENST00000463477 SLC27A1Q6PCB7 646 aa10.48□□□□□ -0.73
PTPRD-207ENST00000463477 CRELD2Q6UXH1 353 aaPredicted RBP10.48□□□□□ -0.73
PTPRD-207ENST00000463477 ZPBP2Q6X784 338 aa10.48□□□□□ -0.73
PTPRD-207ENST00000463477 AGMOQ6ZNB7 445 aa10.48□□□□□ -0.73
PTPRD-207ENST00000463477 CROCCP2Q86T23 111 aa10.48□□□□□ -0.73
PTPRD-207ENST00000463477 SRLQ86TD4 932 aa10.48□□□□□ -0.73
PTPRD-207ENST00000463477 SLC13A5Q86YT5 568 aaPredicted RBP10.48□□□□□ -0.73
PTPRD-207ENST00000463477 MCOLN2Q8IZK6 566 aa10.48□□□□□ -0.73
PTPRD-207ENST00000463477 RNF169Q8NCN4 708 aa10.48□□□□□ -0.73
PTPRD-207ENST00000463477 SMG8Q8ND04 991 aaKnown RBP10.48□□□□□ -0.73
PTPRD-207ENST00000463477 FNBP1Q96RU3 617 aa10.48□□□□□ -0.73
PTPRD-207ENST00000463477 CGRRF1Q99675 332 aa10.48□□□□□ -0.73
PTPRD-207ENST00000463477 C11orf84Q9BUA3 381 aaPredicted RBP10.48□□□□□ -0.73
PTPRD-207ENST00000463477 FAM107BQ9H098 131 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms