RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 HCFC1R1Q9NWW0 138 aa21.56■■□□□ 1.04
NUP43-205ENST00000463048 DNAJC12Q9UKB3 198 aa21.56■■□□□ 1.04
NUP43-205ENST00000463048 MBTPS2O43462 519 aa21.55■■□□□ 1.04
NUP43-205ENST00000463048 C1RP00736 705 aa21.55■■□□□ 1.04
NUP43-205ENST00000463048 HAPLN1P10915 354 aaPredicted RBP21.55■■□□□ 1.04
NUP43-205ENST00000463048 CD19P15391 556 aa21.55■■□□□ 1.04
NUP43-205ENST00000463048 ACO1P21399 889 aaKnown RBP21.55■■□□□ 1.04
NUP43-205ENST00000463048 MFAP3P55082 362 aa21.55■■□□□ 1.04
NUP43-205ENST00000463048 NTHL1P78549 312 aa21.55■■□□□ 1.04
NUP43-205ENST00000463048 FANCCQ00597 558 aa21.55■■□□□ 1.04
NUP43-205ENST00000463048 GCNT1Q02742 428 aa21.55■■□□□ 1.04
NUP43-205ENST00000463048 MAPRE1Q15691 268 aaKnown RBP21.55■■□□□ 1.04
NUP43-205ENST00000463048 DDR2Q16832 855 aa21.55■■□□□ 1.04
NUP43-205ENST00000463048 UVSSAQ2YD98 709 aa21.55■■□□□ 1.04
NUP43-205ENST00000463048 LEXMQ3ZCV2 418 aa21.55■■□□□ 1.04
NUP43-205ENST00000463048 FILIP1LQ4L180 1135 aa21.55■■□□□ 1.04
NUP43-205ENST00000463048 IQCEQ6IPM2 695 aa21.55■■□□□ 1.04
NUP43-205ENST00000463048 GRASPQ7Z6J2 395 aaPredicted RBP21.55■■□□□ 1.04
NUP43-205ENST00000463048 UBR7Q8N806 425 aa21.55■■□□□ 1.04
NUP43-205ENST00000463048 SLC4A11Q8NBS3 891 aa21.55■■□□□ 1.04
NUP43-205ENST00000463048 SLC2A14Q8TDB8 520 aa21.55■■□□□ 1.04
NUP43-205ENST00000463048 C2orf15Q8WU43 125 aaKnown RBP21.55■■□□□ 1.04
NUP43-205ENST00000463048 TMEM176AQ96HP8 235 aa21.55■■□□□ 1.04
NUP43-205ENST00000463048 FAXDC2Q96IV6 333 aa21.55■■□□□ 1.04
NUP43-205ENST00000463048 FAM207AQ9NSI2 230 aaPredicted RBP21.55■■□□□ 1.04
NUP43-205ENST00000463048 ZDHHC7Q9NXF8 308 aa21.55■■□□□ 1.04
NUP43-205ENST00000463048 LRRC10BA6NIK2 292 aa21.54■■□□□ 1.04
NUP43-205ENST00000463048 RNF225M0QZC1 329 aaPredicted RBP21.54■■□□□ 1.04
NUP43-205ENST00000463048 PNMA6AP0CW24 399 aaPredicted RBP21.54■■□□□ 1.04
NUP43-205ENST00000463048 TRIM21P19474 475 aaKnown RBP21.54■■□□□ 1.04
NUP43-205ENST00000463048 SP100P23497 879 aaPredicted RBP21.54■■□□□ 1.04
NUP43-205ENST00000463048 GRIK1P39086 918 aa21.54■■□□□ 1.04
NUP43-205ENST00000463048 CACNA2D1P54289 1103 aa21.54■■□□□ 1.04
NUP43-205ENST00000463048 SMARCB1Q12824 385 aa21.54■■□□□ 1.04
NUP43-205ENST00000463048 SMAD4Q13485 552 aaKnown RBP21.54■■□□□ 1.04
NUP43-205ENST00000463048 RAPGEF1Q13905 1077 aa21.54■■□□□ 1.04
NUP43-205ENST00000463048 GPR149Q86SP6 731 aa21.54■■□□□ 1.04
NUP43-205ENST00000463048 GPIHBP1Q8IV16 184 aa21.54■■□□□ 1.04
NUP43-205ENST00000463048 CRYBG2Q8N1P7 616 aa21.54■■□□□ 1.04
NUP43-205ENST00000463048 RBBP8NLQ8NC74 664 aaPredicted RBP21.54■■□□□ 1.04
NUP43-205ENST00000463048 CORO1BQ9BR76 489 aa21.54■■□□□ 1.04
NUP43-205ENST00000463048 CEP72Q9P209 647 aa21.54■■□□□ 1.04
NUP43-205ENST00000463048 FHOD1Q9Y613 1164 aa21.54■■□□□ 1.04
NUP43-205ENST00000463048 C2orf16Q68DN1 1984 aa21.54■■□□□ 1.04
NUP43-205ENST00000463048 XYLBO75191 536 aa21.53■■□□□ 1.04
NUP43-205ENST00000463048 HNRNPA1P09651 372 aaKnown RBP eCLIP21.53■■□□□ 1.04
NUP43-205ENST00000463048 IL9P15248 144 aa21.53■■□□□ 1.04
NUP43-205ENST00000463048 ATF6P18850 670 aa21.53■■□□□ 1.04
NUP43-205ENST00000463048 SSTR3P32745 418 aaPredicted RBP21.53■■□□□ 1.04
NUP43-205ENST00000463048 TUFMP49411 452 aaKnown RBP21.53■■□□□ 1.04
NUP43-205ENST00000463048 EPHB3P54753 998 aa21.53■■□□□ 1.04
NUP43-205ENST00000463048 ITIH3Q06033 890 aa21.53■■□□□ 1.04
NUP43-205ENST00000463048 ATAT1Q5SQI0 421 aa21.53■■□□□ 1.04
NUP43-205ENST00000463048 KLHDC7AQ5VTJ3 777 aa21.53■■□□□ 1.04
NUP43-205ENST00000463048 FAM35AQ86V20 835 aa21.53■■□□□ 1.04
NUP43-205ENST00000463048 HS6ST3Q8IZP7 471 aa21.53■■□□□ 1.04
NUP43-205ENST00000463048 ELMOD1Q8N336 334 aa21.53■■□□□ 1.04
NUP43-205ENST00000463048 TTC39CQ8N584 583 aa21.53■■□□□ 1.04
NUP43-205ENST00000463048 JAKMIP2Q96AA8 810 aa21.53■■□□□ 1.04
NUP43-205ENST00000463048 CYFIP2Q96F07 1278 aa21.53■■□□□ 1.04
NUP43-205ENST00000463048 DNAI2Q9GZS0 605 aa21.53■■□□□ 1.04
NUP43-205ENST00000463048 RTN4Q9NQC3 1192 aaKnown RBP21.53■■□□□ 1.04
NUP43-205ENST00000463048 KRT82Q9NSB4 513 aa21.53■■□□□ 1.04
NUP43-205ENST00000463048 MAFFQ9ULX9 164 aa21.53■■□□□ 1.04
NUP43-205ENST00000463048 MRPS5P82675 430 aaKnown RBP21.52■■□□□ 1.04
NUP43-205ENST00000463048 PLCB2Q00722 1185 aa21.52■■□□□ 1.04
NUP43-205ENST00000463048 PPP1R26Q5T8A7 1209 aaPredicted RBP21.52■■□□□ 1.04
NUP43-205ENST00000463048 DPY19L2P1Q6NXN4 242 aa21.52■■□□□ 1.04
NUP43-205ENST00000463048 PAQR9Q6ZVX9 377 aa21.52■■□□□ 1.04
NUP43-205ENST00000463048 FUKQ8N0W3 1084 aa21.52■■□□□ 1.04
NUP43-205ENST00000463048 CMASQ8NFW8 434 aaPredicted RBP21.52■■□□□ 1.04
NUP43-205ENST00000463048 ZNF512Q96ME7 567 aaPredicted RBP21.52■■□□□ 1.04
NUP43-205ENST00000463048 RIPOR3Q96MK2 946 aa21.52■■□□□ 1.04
NUP43-205ENST00000463048 IFNKQ9P0W0 207 aa21.52■■□□□ 1.04
NUP43-205ENST00000463048 DNMT3BQ9UBC3 853 aaKnown RBP21.52■■□□□ 1.04
NUP43-205ENST00000463048 MAGED2Q9UNF1 606 aaPredicted RBP21.52■■□□□ 1.04
NUP43-205ENST00000463048 SIK3Q9Y2K2 1263 aa21.52■■□□□ 1.04
NUP43-205ENST00000463048 XIRP2A4UGR9 3374 aa21.52■■□□□ 1.04
NUP43-205ENST00000463048 ATP8B3O60423 1300 aa21.52■■□□□ 1.03
NUP43-205ENST00000463048 EPHB6O15197 1021 aa21.51■■□□□ 1.03
NUP43-205ENST00000463048 AP1G2O75843 785 aa21.51■■□□□ 1.03
NUP43-205ENST00000463048 HOXA9P31269 272 aa21.51■■□□□ 1.03
NUP43-205ENST00000463048 UBASH3AP57075 661 aa21.51■■□□□ 1.03
NUP43-205ENST00000463048 POLR2FP61218 127 aaKnown RBP21.51■■□□□ 1.03
NUP43-205ENST00000463048 IFRD2Q12894 506 aaPredicted RBP21.51■■□□□ 1.03
NUP43-205ENST00000463048 PLD1Q13393 1074 aa21.51■■□□□ 1.03
NUP43-205ENST00000463048 MTMR3Q13615 1198 aa21.51■■□□□ 1.03
NUP43-205ENST00000463048 CBX2Q14781 532 aaPredicted RBP21.51■■□□□ 1.03
NUP43-205ENST00000463048 TAF12Q16514 161 aa21.51■■□□□ 1.03
NUP43-205ENST00000463048 AAK1Q2M2I8 961 aa21.51■■□□□ 1.03
NUP43-205ENST00000463048 CFAP221Q4G0U5 840 aa21.51■■□□□ 1.03
NUP43-205ENST00000463048 ENOSF1Q7L5Y1 443 aa21.51■■□□□ 1.03
NUP43-205ENST00000463048 GAS2L3Q86XJ1 694 aa21.51■■□□□ 1.03
NUP43-205ENST00000463048 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.51■■□□□ 1.03
NUP43-205ENST00000463048 NEK11Q8NG66 645 aa21.51■■□□□ 1.03
NUP43-205ENST00000463048 FUBP3Q96I24 572 aaKnown RBP eCLIP21.51■■□□□ 1.03
NUP43-205ENST00000463048 RBSNQ9H1K0 784 aa21.51■■□□□ 1.03
NUP43-205ENST00000463048 GANQ9H2C0 597 aa21.51■■□□□ 1.03
NUP43-205ENST00000463048 POMKQ9H5K3 350 aa21.51■■□□□ 1.03
NUP43-205ENST00000463048 ABCB6Q9NP58 842 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms