RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 ATG13O75143 517 aa16.89■□□□□ 0.29
SND1-203ENST00000463020 PRPF40AO75400 957 aaKnown RBP16.89■□□□□ 0.29
SND1-203ENST00000463020 FAM13AO94988 1023 aa16.89■□□□□ 0.29
SND1-203ENST00000463020 HNRNPLP14866 589 aaKnown RBP eCLIP16.89■□□□□ 0.29
SND1-203ENST00000463020 NOVA1P51513 510 aaKnown RBP16.89■□□□□ 0.29
SND1-203ENST00000463020 USP4Q13107 963 aa16.89■□□□□ 0.29
SND1-203ENST00000463020 KARSQ15046 597 aaKnown RBP16.89■□□□□ 0.29
SND1-203ENST00000463020 GAB4Q2WGN9 574 aa16.89■□□□□ 0.29
SND1-203ENST00000463020 EML3Q32P44 896 aa16.89■□□□□ 0.29
SND1-203ENST00000463020 ADALQ6DHV7 355 aa16.89■□□□□ 0.29
SND1-203ENST00000463020 SYT13Q7L8C5 426 aa16.89■□□□□ 0.29
SND1-203ENST00000463020 METTL23Q86XA0 190 aa16.89■□□□□ 0.29
SND1-203ENST00000463020 PDCL2Q8N4E4 241 aa16.89■□□□□ 0.29
SND1-203ENST00000463020 CAMKK1Q8N5S9 505 aa16.89■□□□□ 0.29
SND1-203ENST00000463020 C2orf15Q8WU43 125 aaKnown RBP16.89■□□□□ 0.29
SND1-203ENST00000463020 ZSCAN31Q96LW9 406 aaPredicted RBP16.89■□□□□ 0.29
SND1-203ENST00000463020 ZHX3Q9H4I2 956 aa16.89■□□□□ 0.29
SND1-203ENST00000463020 TRPC7Q9HCX4 862 aa16.89■□□□□ 0.29
SND1-203ENST00000463020 SH2B1Q9NRF2 756 aaPredicted RBP16.89■□□□□ 0.29
SND1-203ENST00000463020 KCNG1Q9UIX4 513 aa16.89■□□□□ 0.29
SND1-203ENST00000463020 DSEQ9UL01 958 aa16.89■□□□□ 0.29
SND1-203ENST00000463020 PCDHB5Q9Y5E4 795 aa16.89■□□□□ 0.29
SND1-203ENST00000463020 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.89■□□□□ 0.29
SND1-203ENST00000463020 TCHHQ07283 1943 aa16.89■□□□□ 0.29
SND1-203ENST00000463020 ABCA7Q8IZY2 2146 aa16.88■□□□□ 0.29
SND1-203ENST00000463020 NOL4O94818 638 aa16.88■□□□□ 0.29
SND1-203ENST00000463020 APBB3O95704 486 aa16.88■□□□□ 0.29
SND1-203ENST00000463020 CAVIN2O95810 425 aa16.88■□□□□ 0.29
SND1-203ENST00000463020 CHRM1P11229 460 aaPredicted RBP16.88■□□□□ 0.29
SND1-203ENST00000463020 DRD1P21728 446 aa16.88■□□□□ 0.29
SND1-203ENST00000463020 SEC13P55735 322 aa16.88■□□□□ 0.29
SND1-203ENST00000463020 FOXC1Q12948 553 aa16.88■□□□□ 0.29
SND1-203ENST00000463020 ZNF268Q14587 947 aaPredicted RBP16.88■□□□□ 0.29
SND1-203ENST00000463020 RILPL1Q5EBL4 403 aa16.88■□□□□ 0.29
SND1-203ENST00000463020 HSCBQ8IWL3 235 aa16.88■□□□□ 0.29
SND1-203ENST00000463020 THEM5Q8N1Q8 247 aa16.88■□□□□ 0.29
SND1-203ENST00000463020 OSCP1Q8WVF1 389 aa16.88■□□□□ 0.29
SND1-203ENST00000463020 RAD54LQ92698 747 aa16.88■□□□□ 0.29
SND1-203ENST00000463020 ASB7Q9H672 318 aa16.88■□□□□ 0.29
SND1-203ENST00000463020 KIF9Q9HAQ2 790 aa16.88■□□□□ 0.29
SND1-203ENST00000463020 DUS2Q9NX74 493 aaKnown RBP16.88■□□□□ 0.29
SND1-203ENST00000463020 GCNT4Q9P109 453 aa16.88■□□□□ 0.29
SND1-203ENST00000463020 EBF1Q9UH73 591 aa16.88■□□□□ 0.29
SND1-203ENST00000463020 AGO2Q9UKV8 859 aaKnown RBP16.88■□□□□ 0.29
SND1-203ENST00000463020 ZMIZ1Q9ULJ6 1067 aa16.88■□□□□ 0.29
SND1-203ENST00000463020 ZNF638Q14966 1978 aaKnown RBP16.88■□□□□ 0.29
SND1-203ENST00000463020 K7EQS6 105 aa16.87■□□□□ 0.29
SND1-203ENST00000463020 CDX4O14627 284 aaPredicted RBP16.87■□□□□ 0.29
SND1-203ENST00000463020 DDX6P26196 483 aaKnown RBP eCLIP16.87■□□□□ 0.29
SND1-203ENST00000463020 POLR2BP30876 1174 aaKnown RBP16.87■□□□□ 0.29
SND1-203ENST00000463020 ZNF252P-AS1Q0IIN9 211 aa16.87■□□□□ 0.29
SND1-203ENST00000463020 PSMD2Q13200 908 aa16.87■□□□□ 0.29
SND1-203ENST00000463020 PDGFRLQ15198 375 aa16.87■□□□□ 0.29
SND1-203ENST00000463020 PTPAQ15257 358 aa16.87■□□□□ 0.29
SND1-203ENST00000463020 SH3PXD2AQ5TCZ1 1133 aa16.87■□□□□ 0.29
SND1-203ENST00000463020 UNQ6494/PRO21346Q6UXR6 183 aa16.87■□□□□ 0.29
SND1-203ENST00000463020 FRMD1Q8N878 549 aa16.87■□□□□ 0.29
SND1-203ENST00000463020 ARL14EPQ8N8R7 260 aaPredicted RBP16.87■□□□□ 0.29
SND1-203ENST00000463020 C1orf127Q8N9H9 656 aa16.87■□□□□ 0.29
SND1-203ENST00000463020 MRPS31Q92665 395 aaKnown RBP16.87■□□□□ 0.29
SND1-203ENST00000463020 CD101Q93033 1021 aa16.87■□□□□ 0.29
SND1-203ENST00000463020 GTF3C4Q9UKN8 822 aa16.87■□□□□ 0.29
SND1-203ENST00000463020 SCAMP3O14828 347 aaKnown RBP16.86■□□□□ 0.29
SND1-203ENST00000463020 CD2BP2O95400 341 aaKnown RBP16.86■□□□□ 0.29
SND1-203ENST00000463020 OPRD1P41143 372 aa16.86■□□□□ 0.29
SND1-203ENST00000463020 DGKEP52429 567 aa16.86■□□□□ 0.29
SND1-203ENST00000463020 FAM160A1Q05DH4 1040 aa16.86■□□□□ 0.29
SND1-203ENST00000463020 PMS2CLQ68D20 193 aa16.86■□□□□ 0.29
SND1-203ENST00000463020 CC2D1AQ6P1N0 951 aaPredicted RBP16.86■□□□□ 0.29
SND1-203ENST00000463020 USP49Q70CQ1 688 aa16.86■□□□□ 0.29
SND1-203ENST00000463020 SFR1Q86XK3 245 aa16.86■□□□□ 0.29
SND1-203ENST00000463020 DCP1BQ8IZD4 617 aaKnown RBP16.86■□□□□ 0.29
SND1-203ENST00000463020 CPA6Q8N4T0 437 aa16.86■□□□□ 0.29
SND1-203ENST00000463020 KCTD17Q8N5Z5 321 aa16.86■□□□□ 0.29
SND1-203ENST00000463020 SH3RF2Q8TEC5 729 aa16.86■□□□□ 0.29
SND1-203ENST00000463020 SAAL1Q96ER3 474 aa16.86■□□□□ 0.29
SND1-203ENST00000463020 FGFBP2Q9BYJ0 223 aa16.86■□□□□ 0.29
SND1-203ENST00000463020 DDX43Q9NXZ2 648 aaKnown RBP16.86■□□□□ 0.29
SND1-203ENST00000463020 ATP2C2O75185 946 aa16.85■□□□□ 0.29
SND1-203ENST00000463020 PPP1R37O75864 691 aa16.85■□□□□ 0.29
SND1-203ENST00000463020 ITGB3P05106 788 aa16.85■□□□□ 0.29
SND1-203ENST00000463020 CSH1P0DML2 217 aa16.85■□□□□ 0.29
SND1-203ENST00000463020 CSH2P0DML3 217 aa16.85■□□□□ 0.29
SND1-203ENST00000463020 PAX3P23760 479 aa16.85■□□□□ 0.29
SND1-203ENST00000463020 GBP1P32455 592 aa16.85■□□□□ 0.29
SND1-203ENST00000463020 USP46P62068 366 aa16.85■□□□□ 0.29
SND1-203ENST00000463020 SMARCB1Q12824 385 aa16.85■□□□□ 0.29
SND1-203ENST00000463020 ELF2Q15723 593 aa16.85■□□□□ 0.29
SND1-203ENST00000463020 SV2CQ496J9 727 aa16.85■□□□□ 0.29
SND1-203ENST00000463020 C2orf27AQ580R0 203 aa16.85■□□□□ 0.29
SND1-203ENST00000463020 INTS6LQ5JSJ4 861 aaKnown RBP16.85■□□□□ 0.29
SND1-203ENST00000463020 ARL6IP4Q66PJ3 421 aaKnown RBP16.85■□□□□ 0.29
SND1-203ENST00000463020 ANO7Q6IWH7 933 aa16.85■□□□□ 0.29
SND1-203ENST00000463020 CCDC33Q8N5R6 958 aa16.85■□□□□ 0.29
SND1-203ENST00000463020 MDGA1Q8NFP4 955 aa16.85■□□□□ 0.29
SND1-203ENST00000463020 USP33Q8TEY7 942 aa16.85■□□□□ 0.29
SND1-203ENST00000463020 LEO1Q8WVC0 666 aaPredicted RBP16.85■□□□□ 0.29
SND1-203ENST00000463020 TRMT2BQ96GJ1 504 aaKnown RBP16.85■□□□□ 0.29
SND1-203ENST00000463020 MYRFLQ96LU7 910 aa16.85■□□□□ 0.29
SND1-203ENST00000463020 FAM213AQ9BRX8 229 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms