RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 WDR72Q3MJ13 1102 aa8.25□□□□□ -1.09
UBE4B-204ENST00000462658 TTC38Q5R3I4 469 aa8.25□□□□□ -1.09
UBE4B-204ENST00000462658 PRAMEF9Q5VWM5 478 aa8.25□□□□□ -1.09
UBE4B-204ENST00000462658 CST9Q5W186 159 aa8.25□□□□□ -1.09
UBE4B-204ENST00000462658 PIK3AP1Q6ZUJ8 805 aa8.25□□□□□ -1.09
UBE4B-204ENST00000462658 ZNF761Q86XN6 746 aaPredicted RBP8.25□□□□□ -1.09
UBE4B-204ENST00000462658 TXNDC5Q8NBS9 432 aaKnown RBP8.25□□□□□ -1.09
UBE4B-204ENST00000462658 SYT8Q8NBV8 401 aa8.25□□□□□ -1.09
UBE4B-204ENST00000462658 MAML3Q96JK9 1138 aa8.25□□□□□ -1.09
UBE4B-204ENST00000462658 PGBD1Q96JS3 809 aa8.25□□□□□ -1.09
UBE4B-204ENST00000462658 FOXB1Q99853 325 aa8.25□□□□□ -1.09
UBE4B-204ENST00000462658 KRTAP4-12Q9BQ66 201 aa8.25□□□□□ -1.09
UBE4B-204ENST00000462658 OR10A5Q9H207 317 aa8.25□□□□□ -1.09
UBE4B-204ENST00000462658 ATP8A1Q9Y2Q0 1164 aa8.25□□□□□ -1.09
UBE4B-204ENST00000462658 PCDHA1Q9Y5I3 950 aa8.25□□□□□ -1.09
UBE4B-204ENST00000462658 CCDC194A0A1B0GVG4 234 aa8.24□□□□□ -1.09
UBE4B-204ENST00000462658 TRIM75PA6NK02 468 aa8.24□□□□□ -1.09
UBE4B-204ENST00000462658 H0Y858 1186 aa8.24□□□□□ -1.09
UBE4B-204ENST00000462658 BRINP1O60477 761 aa8.24□□□□□ -1.09
UBE4B-204ENST00000462658 PPP6R2O75170 966 aa8.24□□□□□ -1.09
UBE4B-204ENST00000462658 KLHL18O94889 574 aa8.24□□□□□ -1.09
UBE4B-204ENST00000462658 APOL3O95236 402 aa8.24□□□□□ -1.09
UBE4B-204ENST00000462658 CPEP16870 476 aa8.24□□□□□ -1.09
UBE4B-204ENST00000462658 CD40P25942 277 aa8.24□□□□□ -1.09
UBE4B-204ENST00000462658 MARCKSP29966 332 aaPredicted RBP8.24□□□□□ -1.09
UBE4B-204ENST00000462658 TRAPPC10P48553 1259 aa8.24□□□□□ -1.09
UBE4B-204ENST00000462658 MRPL12P52815 198 aaKnown RBP8.24□□□□□ -1.09
UBE4B-204ENST00000462658 TRAF1Q13077 416 aa8.24□□□□□ -1.09
UBE4B-204ENST00000462658 VGLL4Q14135 290 aa8.24□□□□□ -1.09
UBE4B-204ENST00000462658 LRRC32Q14392 662 aa8.24□□□□□ -1.09
UBE4B-204ENST00000462658 PTPAQ15257 358 aa8.24□□□□□ -1.09
UBE4B-204ENST00000462658 STILQ15468 1287 aa8.24□□□□□ -1.09
UBE4B-204ENST00000462658 PTPROQ16827 1216 aa8.24□□□□□ -1.09
UBE4B-204ENST00000462658 KANK2Q63ZY3 851 aa8.24□□□□□ -1.09
UBE4B-204ENST00000462658 CAVIN1Q6NZI2 390 aaKnown RBP8.24□□□□□ -1.09
UBE4B-204ENST00000462658 ARMC9Q7Z3E5 817 aa8.24□□□□□ -1.09
UBE4B-204ENST00000462658 ZZZ3Q8IYH5 903 aa8.24□□□□□ -1.09
UBE4B-204ENST00000462658 PRPF38AQ8NAV1 312 aaKnown RBP8.24□□□□□ -1.09
UBE4B-204ENST00000462658 WDR48Q8TAF3 677 aa8.24□□□□□ -1.09
UBE4B-204ENST00000462658 CALML6Q8TD86 181 aa8.24□□□□□ -1.09
UBE4B-204ENST00000462658 E2F7Q96AV8 911 aa8.24□□□□□ -1.09
UBE4B-204ENST00000462658 KRTAP9-2Q9BYQ4 174 aa8.24□□□□□ -1.09
UBE4B-204ENST00000462658 GLT8D2Q9H1C3 349 aa8.24□□□□□ -1.09
UBE4B-204ENST00000462658 POFUT1Q9H488 388 aa8.24□□□□□ -1.09
UBE4B-204ENST00000462658 PSTPIP2Q9H939 334 aa8.24□□□□□ -1.09
UBE4B-204ENST00000462658 PCDH12Q9NPG4 1184 aa8.24□□□□□ -1.09
UBE4B-204ENST00000462658 RIC8AQ9NPQ8 531 aa8.24□□□□□ -1.09
UBE4B-204ENST00000462658 FBXO28Q9NVF7 368 aa8.24□□□□□ -1.09
UBE4B-204ENST00000462658 PCDHA7Q9UN72 937 aa8.24□□□□□ -1.09
UBE4B-204ENST00000462658 AFG3L2Q9Y4W6 797 aa8.24□□□□□ -1.09
UBE4B-204ENST00000462658 PCDHB6Q9Y5E3 794 aa8.24□□□□□ -1.09
UBE4B-204ENST00000462658 MYH6P13533 1939 aa8.24□□□□□ -1.09
UBE4B-204ENST00000462658 GPR39O43194 453 aa8.23□□□□□ -1.09
UBE4B-204ENST00000462658 BMP15O95972 392 aa8.23□□□□□ -1.09
UBE4B-204ENST00000462658 CYP1A1P04798 512 aaPredicted RBP8.23□□□□□ -1.09
UBE4B-204ENST00000462658 BMP7P18075 431 aa8.23□□□□□ -1.09
UBE4B-204ENST00000462658 VCAM1P19320 739 aa8.23□□□□□ -1.09
UBE4B-204ENST00000462658 LSP1P33241 339 aa8.23□□□□□ -1.09
UBE4B-204ENST00000462658 CDKN1CP49918 316 aaPredicted RBP8.23□□□□□ -1.09
UBE4B-204ENST00000462658 HMGCS2P54868 508 aa8.23□□□□□ -1.09
UBE4B-204ENST00000462658 PHC1P78364 1004 aa8.23□□□□□ -1.09
UBE4B-204ENST00000462658 ROM1Q03395 351 aa8.23□□□□□ -1.09
UBE4B-204ENST00000462658 ADCY1Q08828 1119 aa8.23□□□□□ -1.09
UBE4B-204ENST00000462658 MYBPC3Q14896 1274 aa8.23□□□□□ -1.09
UBE4B-204ENST00000462658 NONOQ15233 471 aaKnown RBP eCLIP8.23□□□□□ -1.09
UBE4B-204ENST00000462658 USH1GQ495M9 461 aa8.23□□□□□ -1.09
UBE4B-204ENST00000462658 JAKMIP3Q5VZ66 844 aa8.23□□□□□ -1.09
UBE4B-204ENST00000462658 ADALQ6DHV7 355 aa8.23□□□□□ -1.09
UBE4B-204ENST00000462658 SLFN12LQ6IEE8 588 aa8.23□□□□□ -1.09
UBE4B-204ENST00000462658 CCDC174Q6PII3 467 aa8.23□□□□□ -1.09
UBE4B-204ENST00000462658 MOB2Q70IA6 237 aa8.23□□□□□ -1.09
UBE4B-204ENST00000462658 CCAR1Q8IX12 1150 aaKnown RBP8.23□□□□□ -1.09
UBE4B-204ENST00000462658 ANKRD13AQ8IZ07 590 aa8.23□□□□□ -1.09
UBE4B-204ENST00000462658 C7orf31Q8N865 590 aa8.23□□□□□ -1.09
UBE4B-204ENST00000462658 ZNF610Q8N9Z0 462 aa8.23□□□□□ -1.09
UBE4B-204ENST00000462658 CLRN3Q8NCR9 226 aa8.23□□□□□ -1.09
UBE4B-204ENST00000462658 COG1Q8WTW3 980 aa8.23□□□□□ -1.09
UBE4B-204ENST00000462658 CUL5Q93034 780 aa8.23□□□□□ -1.09
UBE4B-204ENST00000462658 SYAP1Q96A49 352 aaPredicted RBP8.23□□□□□ -1.09
UBE4B-204ENST00000462658 SCYL1Q96KG9 808 aa8.23□□□□□ -1.09
UBE4B-204ENST00000462658 C12orf42Q96LP6 360 aa8.23□□□□□ -1.09
UBE4B-204ENST00000462658 SLF1Q9BQI6 1058 aa8.23□□□□□ -1.09
UBE4B-204ENST00000462658 RANBP17Q9H2T7 1088 aaKnown RBP8.23□□□□□ -1.09
UBE4B-204ENST00000462658 RPAP3Q9H6T3 665 aaPredicted RBP8.23□□□□□ -1.09
UBE4B-204ENST00000462658 VTA1Q9NP79 307 aa8.23□□□□□ -1.09
UBE4B-204ENST00000462658 TMOD4Q9NZQ9 345 aa8.23□□□□□ -1.09
UBE4B-204ENST00000462658 FTSJ1Q9UET6 329 aa8.23□□□□□ -1.09
UBE4B-204ENST00000462658 MSRAQ9UJ68 235 aa8.23□□□□□ -1.09
UBE4B-204ENST00000462658 TCHHQ07283 1943 aa8.23□□□□□ -1.09
UBE4B-204ENST00000462658 PAPPA2Q9BXP8 1791 aa8.22□□□□□ -1.09
UBE4B-204ENST00000462658 CUTAO60888 179 aa8.22□□□□□ -1.09
UBE4B-204ENST00000462658 ZBED4O75132 1171 aa8.22□□□□□ -1.09
UBE4B-204ENST00000462658 FLOT1O75955 427 aa8.22□□□□□ -1.09
UBE4B-204ENST00000462658 PRPF6O94906 941 aaKnown RBP8.22□□□□□ -1.09
UBE4B-204ENST00000462658 MCM7P33993 719 aa8.22□□□□□ -1.09
UBE4B-204ENST00000462658 KCNC1P48547 511 aa8.22□□□□□ -1.09
UBE4B-204ENST00000462658 PPATQ06203 517 aa8.22□□□□□ -1.09
UBE4B-204ENST00000462658 NOLC1Q14978 699 aaKnown RBP eCLIP8.22□□□□□ -1.09
UBE4B-204ENST00000462658 UBE2SQ16763 222 aa8.22□□□□□ -1.09
UBE4B-204ENST00000462658 GPR158Q5T848 1215 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms