RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 COASYQ13057 564 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 SLBPQ14493 270 aaKnown RBP eCLIP6.28□□□□□ -1.4
VPS36-202ENST00000462289 INPP5AQ14642 412 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 KCNB1Q14721 858 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 NFIL3Q16649 462 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 ZCWPW2Q504Y3 356 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 EEF1DP3Q658K8 133 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 SLC27A1Q6PCB7 646 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 LRFN4Q6PJG9 635 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 FOXR2Q6PJQ5 311 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 LRRC55Q6ZSA7 311 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 CATSPER4Q7RTX7 472 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 SFR1Q86XK3 245 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 ZBTB8OSQ8IWT0 167 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 C12orf56Q8IXR9 622 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 PDILTQ8N807 584 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 KIAA0895Q8NCT3 520 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 P2RX5Q93086 422 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 GAL3ST3Q96A11 431 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 ELMO3Q96BJ8 720 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 DHX58Q96C10 678 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 ZNF668Q96K58 619 aaPredicted RBP6.28□□□□□ -1.4
VPS36-202ENST00000462289 IFT74Q96LB3 600 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 PPP1R16BQ96T49 567 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 EIF2AQ9BY44 585 aaKnown RBP6.28□□□□□ -1.4
VPS36-202ENST00000462289 FOXQ1Q9C009 403 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 LRRC27Q9C0I9 530 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 TMEM117Q9H0C3 514 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 CDT1Q9H211 546 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 CWH43Q9H720 699 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 KMT5AQ9NQR1 393 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 PRDM7Q9NQW5 492 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 LMCD1Q9NZU5 365 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 TBX20Q9UMR3 447 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 PIN4Q9Y237 131 aaKnown RBP6.28□□□□□ -1.4
VPS36-202ENST00000462289 GIT1Q9Y2X7 761 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 PCDHB2Q9Y5E7 798 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 TTC28Q96AY4 2481 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 UNC80Q8N2C7 3258 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 MUC3AQ02505 3323 aa6.28□□□□□ -1.4
VPS36-202ENST00000462289 DENND3A2RUS2 1198 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 DBX1A6NMT0 343 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 INO80B-WBP1J3KQ70 363 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 K7ERI5 159 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 PTGESO14684 152 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 N4BP3O15049 544 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 SLC16A4O15374 487 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 B4GALT3O60512 393 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 RB1P06400 928 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 USP17L7P0C7H9 530 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 STAG3L1P0CL83 205 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 MCF2P10911 925 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 MYOGP15173 224 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 ZSCAN20P17040 1043 aaPredicted RBP6.27□□□□□ -1.41
VPS36-202ENST00000462289 UBE2HP62256 183 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 SNRPFP62306 86 aaKnown RBP6.27□□□□□ -1.41
VPS36-202ENST00000462289 KCNA1Q09470 495 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 MESP2Q0VG99 397 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 IKZF1Q13422 519 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 CUL4BQ13620 913 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 CAMK1Q14012 370 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 ZBTB6Q15916 424 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 DCAF4L1Q3SXM0 396 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 L1TD1Q5T7N2 865 aaKnown RBP6.27□□□□□ -1.41
VPS36-202ENST00000462289 ATF7IP2Q5U623 682 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 MPZL3Q6UWV2 235 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 CRELD2Q6UXH1 353 aaPredicted RBP6.27□□□□□ -1.41
VPS36-202ENST00000462289 RBM43Q6ZSC3 357 aaKnown RBP6.27□□□□□ -1.41
VPS36-202ENST00000462289 MAEAQ7L5Y9 396 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 TMCO2Q7Z6W1 182 aaPredicted RBP6.27□□□□□ -1.41
VPS36-202ENST00000462289 ZSWIM9Q86XI8 627 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 ZC3H3Q8IXZ2 948 aaKnown RBP6.27□□□□□ -1.41
VPS36-202ENST00000462289 MYOCDQ8IZQ8 938 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 FSIP1Q8NA03 581 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 DEPTORQ8TB45 409 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 SCFD1Q8WVM8 642 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 TIFAQ96CG3 184 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 PLPPR2Q96GM1 343 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 CCDC43Q96MW1 224 aaKnown RBP6.27□□□□□ -1.41
VPS36-202ENST00000462289 FRMD6Q96NE9 622 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 SAMD11Q96NU1 681 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 PPP1R10Q96QC0 940 aaKnown RBP6.27□□□□□ -1.41
VPS36-202ENST00000462289 TSPAN18Q96SJ8 248 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 MRPL4Q9BYD3 311 aaKnown RBP6.27□□□□□ -1.41
VPS36-202ENST00000462289 WNT10AQ9GZT5 417 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 KCTD10Q9H3F6 313 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 FBRSQ9HAH7 460 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 POLD4Q9HCU8 107 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 UBN1Q9NPG3 1134 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 LMBRD1Q9NUN5 540 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 DMAC2Q9NW81 257 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 MTMR10Q9NXD2 777 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 CTNND2Q9UQB3 1225 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 GINS2Q9Y248 185 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 IPPQ9Y573 584 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 VCANP13611 3396 aa6.27□□□□□ -1.41
VPS36-202ENST00000462289 TTC26A0AVF1 554 aa6.26□□□□□ -1.41
VPS36-202ENST00000462289 EPOPA6NHQ4 379 aa6.26□□□□□ -1.41
VPS36-202ENST00000462289 TMEM189-UBE2V1I3L0A0 370 aa6.26□□□□□ -1.41
VPS36-202ENST00000462289 TGFB1I1O43294 461 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms