RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 DNAAF2Q9NVR5 837 aaKnown RBP16.5■□□□□ 0.23
APP-211ENST00000462267 PCDHB9Q9Y5E1 797 aa16.5■□□□□ 0.23
APP-211ENST00000462267 TNRC6BQ9UPQ9 1833 aaKnown RBP16.49■□□□□ 0.23
APP-211ENST00000462267 ZNF638Q14966 1978 aaKnown RBP16.49■□□□□ 0.23
APP-211ENST00000462267 CELSR3Q9NYQ7 3312 aa16.49■□□□□ 0.23
APP-211ENST00000462267 ARHGAP33O14559 1287 aa16.49■□□□□ 0.23
APP-211ENST00000462267 SLC16A4O15374 487 aa16.49■□□□□ 0.23
APP-211ENST00000462267 HIP1RO75146 1068 aa16.49■□□□□ 0.23
APP-211ENST00000462267 REC8O95072 547 aa16.49■□□□□ 0.23
APP-211ENST00000462267 USP17L7P0C7H9 530 aa16.49■□□□□ 0.23
APP-211ENST00000462267 FTH1P19P0C7X4 201 aa16.49■□□□□ 0.23
APP-211ENST00000462267 HNRNPLP14866 589 aaKnown RBP eCLIP16.49■□□□□ 0.23
APP-211ENST00000462267 CCT6AP40227 531 aaKnown RBP16.49■□□□□ 0.23
APP-211ENST00000462267 OPRD1P41143 372 aa16.49■□□□□ 0.23
APP-211ENST00000462267 GUCY2FP51841 1108 aa16.49■□□□□ 0.23
APP-211ENST00000462267 USP4Q13107 963 aa16.49■□□□□ 0.23
APP-211ENST00000462267 ECM1Q16610 540 aa16.49■□□□□ 0.23
APP-211ENST00000462267 METTL23Q86XA0 190 aa16.49■□□□□ 0.23
APP-211ENST00000462267 EFCAB13Q8IY85 973 aa16.49■□□□□ 0.23
APP-211ENST00000462267 DIS3L2Q8IYB7 885 aaKnown RBP16.49■□□□□ 0.23
APP-211ENST00000462267 THEM5Q8N1Q8 247 aa16.49■□□□□ 0.23
APP-211ENST00000462267 FRMD1Q8N878 549 aa16.49■□□□□ 0.23
APP-211ENST00000462267 FSCN3Q9NQT6 498 aa16.49■□□□□ 0.23
APP-211ENST00000462267 PDRG1Q9NUG6 133 aa16.49■□□□□ 0.23
APP-211ENST00000462267 ABI2Q9NYB9 513 aaPredicted RBP16.49■□□□□ 0.23
APP-211ENST00000462267 BCCIPQ9P287 314 aaKnown RBP eCLIP16.49■□□□□ 0.23
APP-211ENST00000462267 UXTQ9UBK9 157 aaPredicted RBP16.49■□□□□ 0.23
APP-211ENST00000462267 DKK4Q9UBT3 224 aa16.49■□□□□ 0.23
APP-211ENST00000462267 KCNG1Q9UIX4 513 aa16.49■□□□□ 0.23
APP-211ENST00000462267 KIAA1024Q9UPX6 916 aa16.49■□□□□ 0.23
APP-211ENST00000462267 URB1O60287 2271 aaKnown RBP16.49■□□□□ 0.23
APP-211ENST00000462267 PTPRDP23468 1912 aa16.49■□□□□ 0.23
APP-211ENST00000462267 DENND4CQ5VZ89 1909 aa16.49■□□□□ 0.23
APP-211ENST00000462267 LACTBL1A8MY62 500 aa16.48■□□□□ 0.23
APP-211ENST00000462267 PPEF2O14830 753 aa16.48■□□□□ 0.23
APP-211ENST00000462267 AP5Z1O43299 807 aa16.48■□□□□ 0.23
APP-211ENST00000462267 PFKFB2O60825 505 aa16.48■□□□□ 0.23
APP-211ENST00000462267 CTDNEP1O95476 244 aa16.48■□□□□ 0.23
APP-211ENST00000462267 NFATC1O95644 943 aa16.48■□□□□ 0.23
APP-211ENST00000462267 SYPP08247 313 aa16.48■□□□□ 0.23
APP-211ENST00000462267 OR52Z1P0C646 297 aa16.48■□□□□ 0.23
APP-211ENST00000462267 FDPSP14324 419 aaKnown RBP16.48■□□□□ 0.23
APP-211ENST00000462267 MATR3P43243 847 aaKnown RBP eCLIP16.48■□□□□ 0.23
APP-211ENST00000462267 CDR1P51861 262 aa16.48■□□□□ 0.23
APP-211ENST00000462267 KYAT1Q16773 422 aa16.48■□□□□ 0.23
APP-211ENST00000462267 SPATA1Q5VX52 437 aa16.48■□□□□ 0.23
APP-211ENST00000462267 LRRTM3Q86VH5 581 aa16.48■□□□□ 0.23
APP-211ENST00000462267 SPIRE2Q8WWL2 714 aa16.48■□□□□ 0.23
APP-211ENST00000462267 MAGED2Q9UNF1 606 aaPredicted RBP16.48■□□□□ 0.23
APP-211ENST00000462267 APOBEC2Q9Y235 224 aaKnown RBP16.48■□□□□ 0.23
APP-211ENST00000462267 TRAV19A0A0A6YYK7 116 aa16.47■□□□□ 0.23
APP-211ENST00000462267 SH3BP5O60239 455 aa16.47■□□□□ 0.23
APP-211ENST00000462267 DTNBO60941 627 aa16.47■□□□□ 0.23
APP-211ENST00000462267 CKMP06732 381 aa16.47■□□□□ 0.23
APP-211ENST00000462267 TCF3P15923 654 aa16.47■□□□□ 0.23
APP-211ENST00000462267 EOGTQ5NDL2 527 aa16.47■□□□□ 0.23
APP-211ENST00000462267 DCP1BQ8IZD4 617 aaKnown RBP16.47■□□□□ 0.23
APP-211ENST00000462267 ALLCQ8N6M5 410 aa16.47■□□□□ 0.23
APP-211ENST00000462267 PNPLA1Q8N8W4 532 aa16.47■□□□□ 0.23
APP-211ENST00000462267 IL17RCQ8NAC3 791 aa16.47■□□□□ 0.23
APP-211ENST00000462267 TXNDC5Q8NBS9 432 aaKnown RBP16.47■□□□□ 0.23
APP-211ENST00000462267 TTC16Q8NEE8 873 aa16.47■□□□□ 0.23
APP-211ENST00000462267 CAMK1GQ96NX5 476 aa16.47■□□□□ 0.23
APP-211ENST00000462267 LINC00597Q9H2U6 94 aa16.47■□□□□ 0.23
APP-211ENST00000462267 TRPC7Q9HCX4 862 aa16.47■□□□□ 0.23
APP-211ENST00000462267 DDX19AQ9NUU7 478 aaKnown RBP16.47■□□□□ 0.23
APP-211ENST00000462267 PCDHB5Q9Y5E4 795 aa16.47■□□□□ 0.23
APP-211ENST00000462267 ANTXRLA6NF34 631 aa16.46■□□□□ 0.23
APP-211ENST00000462267 PIRO00625 290 aa16.46■□□□□ 0.23
APP-211ENST00000462267 TADA3O75528 432 aa16.46■□□□□ 0.23
APP-211ENST00000462267 KLF8O95600 359 aaPredicted RBP16.46■□□□□ 0.23
APP-211ENST00000462267 ADRB2P07550 413 aa16.46■□□□□ 0.23
APP-211ENST00000462267 SMTNP53814 917 aa16.46■□□□□ 0.23
APP-211ENST00000462267 MAPK7Q13164 816 aa16.46■□□□□ 0.23
APP-211ENST00000462267 ORC2Q13416 577 aaPredicted RBP16.46■□□□□ 0.23
APP-211ENST00000462267 NBR1Q14596 966 aa16.46■□□□□ 0.23
APP-211ENST00000462267 C9orf57Q5W0N0 161 aa16.46■□□□□ 0.23
APP-211ENST00000462267 SLC36A4Q6YBV0 504 aa16.46■□□□□ 0.23
APP-211ENST00000462267 TMEM161BQ8NDZ6 487 aa16.46■□□□□ 0.23
APP-211ENST00000462267 SH3RF2Q8TEC5 729 aa16.46■□□□□ 0.23
APP-211ENST00000462267 HMGB4Q8WW32 186 aa16.46■□□□□ 0.23
APP-211ENST00000462267 TRMT2BQ96GJ1 504 aaKnown RBP16.46■□□□□ 0.23
APP-211ENST00000462267 MYRFLQ96LU7 910 aa16.46■□□□□ 0.23
APP-211ENST00000462267 SLC22A12Q96S37 553 aa16.46■□□□□ 0.23
APP-211ENST00000462267 UBL7Q96S82 380 aaPredicted RBP16.46■□□□□ 0.23
APP-211ENST00000462267 CYP2S1Q96SQ9 504 aa16.46■□□□□ 0.23
APP-211ENST00000462267 HAPLN2Q9GZV7 340 aa16.46■□□□□ 0.23
APP-211ENST00000462267 DNM3Q9UQ16 869 aa16.46■□□□□ 0.23
APP-211ENST00000462267 MYMKA6NI61 221 aa16.45■□□□□ 0.22
APP-211ENST00000462267 SGK1O00141 431 aa16.45■□□□□ 0.22
APP-211ENST00000462267 TK2O00142 265 aa16.45■□□□□ 0.22
APP-211ENST00000462267 CYB561D2O14569 222 aa16.45■□□□□ 0.22
APP-211ENST00000462267 EPB41L2O43491 1005 aaKnown RBP16.45■□□□□ 0.22
APP-211ENST00000462267 PRPF40AO75400 957 aaKnown RBP16.45■□□□□ 0.22
APP-211ENST00000462267 GJB3O75712 270 aa16.45■□□□□ 0.22
APP-211ENST00000462267 NOL4O94818 638 aa16.45■□□□□ 0.22
APP-211ENST00000462267 MAPTP10636 758 aaKnown RBP16.45■□□□□ 0.22
APP-211ENST00000462267 TNFSF9P41273 254 aa16.45■□□□□ 0.22
APP-211ENST00000462267 RPL6Q02878 288 aaKnown RBP16.45■□□□□ 0.22
APP-211ENST00000462267 ZNF33AQ06730 810 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms