RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 GBA2Q9HCG7 927 aaPredicted RBP5.2□□□□□ -1.58
CSMD3-205ENST00000462254 KIAA1586Q9HCI6 787 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 TOPORSQ9NS56 1045 aaPredicted RBP5.2□□□□□ -1.58
CSMD3-205ENST00000462254 GPR27Q9NS67 375 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 CCM2LQ9NUG4 571 aaPredicted RBP5.2□□□□□ -1.58
CSMD3-205ENST00000462254 FBXO28Q9NVF7 368 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 RTEL1Q9NZ71 1219 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 CHMP5Q9NZZ3 219 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 H2AFY2Q9P0M6 372 aaPredicted RBP5.2□□□□□ -1.58
CSMD3-205ENST00000462254 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.2□□□□□ -1.58
CSMD3-205ENST00000462254 TMEFF2Q9UIK5 374 aaPredicted RBP5.2□□□□□ -1.58
CSMD3-205ENST00000462254 ACSL6Q9UKU0 697 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 MTMR6Q9Y217 621 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 POLHQ9Y253 713 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 AFG3L2Q9Y4W6 797 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 PCDHGB6Q9Y5F9 930 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 ZHX2Q9Y6X8 837 aa5.2□□□□□ -1.58
CSMD3-205ENST00000462254 THSD7BQ9C0I4 1608 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 VPS37CA5D8V6 355 aaPredicted RBP5.19□□□□□ -1.58
CSMD3-205ENST00000462254 TMEM232C9JQI7 657 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 K7ENM7 598 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 WNT9AO14904 365 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 ADAMTS3O15072 1205 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 WDR46O15213 610 aaKnown RBP5.19□□□□□ -1.58
CSMD3-205ENST00000462254 NCAM2O15394 837 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 CNOT4O95628 575 aaKnown RBP5.19□□□□□ -1.58
CSMD3-205ENST00000462254 SCG2P13521 617 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 SMARCA1P28370 1054 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 LSP1P33241 339 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 GNAQP50148 359 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 HMGCS2P54868 508 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 BACE1P56817 501 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 SNAP25P60880 206 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 FKBP1BP68106 108 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 PPATQ06203 517 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 PAK1Q13153 545 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 NPY5RQ15761 445 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 PFKFB3Q16875 520 aaPredicted RBP5.19□□□□□ -1.58
CSMD3-205ENST00000462254 FAM47CQ5HY64 1035 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 ADGRF1Q5T601 910 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 KRT40Q6A162 431 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 OGFOD2Q6N063 350 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 BTNL9Q6UXG8 535 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 OTOP1Q7RTM1 612 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 ANKRD23Q86SG2 305 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 ERO1BQ86YB8 467 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 DENND1CQ8IV53 801 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 KSR1Q8IVT5 923 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 CCDC103Q8IW40 242 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 CMIPQ8IY22 773 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 MYCT1Q8N699 235 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 NPLOC4Q8TAT6 608 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 OPTNQ96CV9 577 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 CHAMP1Q96JM3 812 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 NUP62CLQ9H1M0 184 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 BHMT2Q9H2M3 363 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 UNC45AQ9H3U1 944 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 NSUN3Q9H649 340 aaKnown RBP5.19□□□□□ -1.58
CSMD3-205ENST00000462254 JMJD4Q9H9V9 463 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 VAT1LQ9HCJ6 419 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 RRN3Q9NYV6 651 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 VPS54Q9P1Q0 977 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 FBLN5Q9UBX5 448 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 ISY1Q9ULR0 285 aaKnown RBP5.19□□□□□ -1.58
CSMD3-205ENST00000462254 L1RE1Q9UN81 338 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 SLC4A7Q9Y6M7 1214 aa5.19□□□□□ -1.58
CSMD3-205ENST00000462254 MYH9P35579 1960 aaKnown RBP5.18□□□□□ -1.58
CSMD3-205ENST00000462254 A0A0G2JLL6 359 aaPredicted RBP5.18□□□□□ -1.58
CSMD3-205ENST00000462254 C7orf72A4D263 438 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 A6NCN8 305 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 KIF28PB7ZC32 967 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 C19orf81C9J6K1 198 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 ZBTB5O15062 677 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 GSTA4O15217 222 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 PLA2G6O60733 806 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 MMP1P03956 469 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 SRGAP2CP0DJJ0 459 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 ZSCAN22P10073 491 aaPredicted RBP5.18□□□□□ -1.58
CSMD3-205ENST00000462254 PNLIPP16233 465 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 PAMP19021 973 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 PDCP20941 246 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 TACR1P25103 407 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 YY1P25490 414 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 PPM1AP35813 382 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 STAT2P52630 851 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 NUCB2P80303 420 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 CYP4F8P98187 520 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 AKAP17AQ02040 695 aaKnown RBP5.18□□□□□ -1.58
CSMD3-205ENST00000462254 IKQ13123 557 aaPredicted RBP5.18□□□□□ -1.58
CSMD3-205ENST00000462254 RESTQ13127 1097 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 PPIL2Q13356 520 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 MOGSQ13724 837 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 CDC37Q16543 378 aaPredicted RBP5.18□□□□□ -1.58
CSMD3-205ENST00000462254 INF2Q27J81 1249 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 QRICH1Q2TAL8 776 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 WDR45BQ5MNZ6 344 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 TREML2Q5T2D2 321 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 CYP26C1Q6V0L0 522 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 LBX2Q6XYB7 198 aa5.18□□□□□ -1.58
CSMD3-205ENST00000462254 PRRT2Q7Z6L0 340 aaPredicted RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms