RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 FAM81AQ8TBF8 368 aa16.2■□□□□ 0.18
LMNB1-203ENST00000460265 FHDC1Q9C0D6 1143 aaPredicted RBP16.2■□□□□ 0.18
LMNB1-203ENST00000460265 HEY1Q9Y5J3 304 aa16.2■□□□□ 0.18
LMNB1-203ENST00000460265 IKBKGQ9Y6K9 419 aa16.2■□□□□ 0.18
LMNB1-203ENST00000460265 PDE4DIPQ5VU43 2346 aa16.19■□□□□ 0.18
LMNB1-203ENST00000460265 SIPA1L1O43166 1804 aa16.19■□□□□ 0.18
LMNB1-203ENST00000460265 WDR91A4D1P6 747 aa16.19■□□□□ 0.18
LMNB1-203ENST00000460265 H7C0C1 242 aa16.19■□□□□ 0.18
LMNB1-203ENST00000460265 EDN1P05305 212 aa16.19■□□□□ 0.18
LMNB1-203ENST00000460265 PYGBP11216 843 aa16.19■□□□□ 0.18
LMNB1-203ENST00000460265 BRAFP15056 766 aa16.19■□□□□ 0.18
LMNB1-203ENST00000460265 PHKA2P46019 1235 aa16.19■□□□□ 0.18
LMNB1-203ENST00000460265 ATP5OP48047 213 aa16.19■□□□□ 0.18
LMNB1-203ENST00000460265 KIZQ2M2Z5 673 aa16.19■□□□□ 0.18
LMNB1-203ENST00000460265 BRSK2Q8IWQ3 736 aa16.19■□□□□ 0.18
LMNB1-203ENST00000460265 LRRC34Q8IZ02 419 aa16.19■□□□□ 0.18
LMNB1-203ENST00000460265 ZBED8Q8IZ13 594 aa16.19■□□□□ 0.18
LMNB1-203ENST00000460265 GALNT15Q8N3T1 639 aa16.19■□□□□ 0.18
LMNB1-203ENST00000460265 TEX9Q8N6V9 391 aa16.19■□□□□ 0.18
LMNB1-203ENST00000460265 DDX1Q92499 740 aaKnown RBP16.19■□□□□ 0.18
LMNB1-203ENST00000460265 PCYT2Q99447 389 aa16.19■□□□□ 0.18
LMNB1-203ENST00000460265 GORASP1Q9BQQ3 440 aa16.19■□□□□ 0.18
LMNB1-203ENST00000460265 NSRP1Q9H0G5 558 aaKnown RBP16.19■□□□□ 0.18
LMNB1-203ENST00000460265 C2orf40Q9H1Z8 148 aa16.19■□□□□ 0.18
LMNB1-203ENST00000460265 CNOT10Q9H9A5 744 aaKnown RBP16.19■□□□□ 0.18
LMNB1-203ENST00000460265 DNPEPQ9ULA0 475 aa16.19■□□□□ 0.18
LMNB1-203ENST00000460265 SLC12A4Q9UP95 1085 aa16.19■□□□□ 0.18
LMNB1-203ENST00000460265 LTBP1Q14766 1721 aa16.19■□□□□ 0.18
LMNB1-203ENST00000460265 MAFO75444 373 aaPredicted RBP16.19■□□□□ 0.18
LMNB1-203ENST00000460265 AGBL2Q5U5Z8 902 aa16.19■□□□□ 0.18
LMNB1-203ENST00000460265 LONP2Q86WA8 852 aa16.19■□□□□ 0.18
LMNB1-203ENST00000460265 KIF12Q96FN5 646 aa16.19■□□□□ 0.18
LMNB1-203ENST00000460265 C12orf42Q96LP6 360 aa16.19■□□□□ 0.18
LMNB1-203ENST00000460265 MYPNQ86TC9 1320 aa16.19■□□□□ 0.18
LMNB1-203ENST00000460265 FOCADQ5VW36 1801 aa16.19■□□□□ 0.18
LMNB1-203ENST00000460265 RIPK2O43353 540 aa16.18■□□□□ 0.18
LMNB1-203ENST00000460265 CST8O60676 142 aa16.18■□□□□ 0.18
LMNB1-203ENST00000460265 TGFB3P10600 412 aa16.18■□□□□ 0.18
LMNB1-203ENST00000460265 UNGP13051 313 aaPredicted RBP16.18■□□□□ 0.18
LMNB1-203ENST00000460265 ITIH2P19823 946 aa16.18■□□□□ 0.18
LMNB1-203ENST00000460265 YWHAEP62258 255 aaKnown RBP16.18■□□□□ 0.18
LMNB1-203ENST00000460265 SMAD1Q15797 465 aaKnown RBP16.18■□□□□ 0.18
LMNB1-203ENST00000460265 CATSPER4Q7RTX7 472 aa16.18■□□□□ 0.18
LMNB1-203ENST00000460265 ERAP1Q9NZ08 941 aa16.18■□□□□ 0.18
LMNB1-203ENST00000460265 SNX9Q9Y5X1 595 aa16.18■□□□□ 0.18
LMNB1-203ENST00000460265 MYH9P35579 1960 aaKnown RBP16.18■□□□□ 0.18
LMNB1-203ENST00000460265 STBD1O95210 358 aa16.18■□□□□ 0.18
LMNB1-203ENST00000460265 STAG3L1P0CL83 205 aa16.18■□□□□ 0.18
LMNB1-203ENST00000460265 RARGP13631 454 aa16.18■□□□□ 0.18
LMNB1-203ENST00000460265 MAN1A1P33908 653 aa16.18■□□□□ 0.18
LMNB1-203ENST00000460265 PTGIRP43119 386 aa16.18■□□□□ 0.18
LMNB1-203ENST00000460265 KRT81Q14533 505 aa16.18■□□□□ 0.18
LMNB1-203ENST00000460265 BSPRYQ5W0U4 402 aa16.18■□□□□ 0.18
LMNB1-203ENST00000460265 MAP1SQ66K74 1059 aaPredicted RBP16.18■□□□□ 0.18
LMNB1-203ENST00000460265 MPZL3Q6UWV2 235 aa16.18■□□□□ 0.18
LMNB1-203ENST00000460265 PALM2Q8IXS6 379 aa16.18■□□□□ 0.18
LMNB1-203ENST00000460265 OR6B3Q8NGW1 331 aa16.18■□□□□ 0.18
LMNB1-203ENST00000460265 ACO2Q99798 780 aaKnown RBP16.18■□□□□ 0.18
LMNB1-203ENST00000460265 DCLK3Q9C098 648 aa16.18■□□□□ 0.18
LMNB1-203ENST00000460265 METTL5Q9NRN9 209 aaKnown RBP16.18■□□□□ 0.18
LMNB1-203ENST00000460265 TJP2Q9UDY2 1190 aa16.18■□□□□ 0.18
LMNB1-203ENST00000460265 NENFQ9UMX5 172 aa16.18■□□□□ 0.18
LMNB1-203ENST00000460265 PPFIA2O75334 1257 aa16.18■□□□□ 0.18
LMNB1-203ENST00000460265 RFC1P35251 1148 aaPredicted RBP16.18■□□□□ 0.18
LMNB1-203ENST00000460265 ADCYAP1R1P41586 468 aa16.18■□□□□ 0.18
LMNB1-203ENST00000460265 RTP1P59025 263 aa16.18■□□□□ 0.18
LMNB1-203ENST00000460265 TMEM154Q6P9G4 183 aa16.18■□□□□ 0.18
LMNB1-203ENST00000460265 CDCA5Q96FF9 252 aa16.18■□□□□ 0.18
LMNB1-203ENST00000460265 RBM41Q96IZ5 413 aaKnown RBP16.18■□□□□ 0.18
LMNB1-203ENST00000460265 TRAIPQ9BWF2 469 aa16.18■□□□□ 0.18
LMNB1-203ENST00000460265 SUDS3Q9H7L9 328 aaPredicted RBP16.18■□□□□ 0.18
LMNB1-203ENST00000460265 PCYOX1Q9UHG3 505 aa16.18■□□□□ 0.18
LMNB1-203ENST00000460265 RASA4BC9J798 803 aa16.17■□□□□ 0.18
LMNB1-203ENST00000460265 RASA4O43374 803 aa16.17■□□□□ 0.18
LMNB1-203ENST00000460265 HBP1O60381 514 aa16.17■□□□□ 0.18
LMNB1-203ENST00000460265 NFICP08651 508 aa16.17■□□□□ 0.18
LMNB1-203ENST00000460265 P4HA1P13674 534 aa16.17■□□□□ 0.18
LMNB1-203ENST00000460265 MSH2P43246 934 aa16.17■□□□□ 0.18
LMNB1-203ENST00000460265 SURF1Q15526 300 aa16.17■□□□□ 0.18
LMNB1-203ENST00000460265 DENND1BQ6P3S1 775 aa16.17■□□□□ 0.18
LMNB1-203ENST00000460265 ZDHHC24Q6UX98 284 aa16.17■□□□□ 0.18
LMNB1-203ENST00000460265 CTAGE3PQ8IX95 158 aa16.17■□□□□ 0.18
LMNB1-203ENST00000460265 LRRN4Q8WUT4 740 aa16.17■□□□□ 0.18
LMNB1-203ENST00000460265 GPR20Q99678 358 aa16.17■□□□□ 0.18
LMNB1-203ENST00000460265 FAM129AQ9BZQ8 928 aa16.17■□□□□ 0.18
LMNB1-203ENST00000460265 GRHL1Q9NZI5 618 aa16.17■□□□□ 0.18
LMNB1-203ENST00000460265 SLC25A27O95847 323 aa16.17■□□□□ 0.18
LMNB1-203ENST00000460265 KRT16P08779 473 aa16.17■□□□□ 0.18
LMNB1-203ENST00000460265 PDGFRBP09619 1106 aa16.17■□□□□ 0.18
LMNB1-203ENST00000460265 DESP17661 470 aa16.17■□□□□ 0.18
LMNB1-203ENST00000460265 CCNA1P78396 465 aa16.17■□□□□ 0.18
LMNB1-203ENST00000460265 MRPS35P82673 323 aaKnown RBP16.17■□□□□ 0.18
LMNB1-203ENST00000460265 PDIA2Q13087 525 aaKnown RBP16.17■□□□□ 0.18
LMNB1-203ENST00000460265 CELF3Q5SZQ8 465 aaKnown RBP16.17■□□□□ 0.18
LMNB1-203ENST00000460265 ERMARDQ5T6L9 678 aa16.17■□□□□ 0.18
LMNB1-203ENST00000460265 CHADLQ6NUI6 762 aa16.17■□□□□ 0.18
LMNB1-203ENST00000460265 C1orf228Q6PIY5 440 aa16.17■□□□□ 0.18
LMNB1-203ENST00000460265 WDR49Q8IV35 697 aa16.17■□□□□ 0.18
LMNB1-203ENST00000460265 HERPUD2Q9BSE4 406 aa16.17■□□□□ 0.18
LMNB1-203ENST00000460265 MINDY3Q9H8M7 445 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms