RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 A0A087WZ62 844 aa19.08■□□□□ 0.64
HPS3-202ENST00000460120 GOLGA8RI6L899 631 aa19.08■□□□□ 0.64
HPS3-202ENST00000460120 LACTB2Q53H82 288 aaPredicted RBP19.08■□□□□ 0.64
HPS3-202ENST00000460120 SPATA21Q7Z572 469 aa19.08■□□□□ 0.64
HPS3-202ENST00000460120 ZC3H18Q86VM9 953 aaKnown RBP19.08■□□□□ 0.64
HPS3-202ENST00000460120 TBC1D31Q96DN5 1066 aa19.08■□□□□ 0.64
HPS3-202ENST00000460120 RMDN2Q96LZ7 410 aa19.08■□□□□ 0.64
HPS3-202ENST00000460120 HEXIM2Q96MH2 286 aaKnown RBP19.08■□□□□ 0.64
HPS3-202ENST00000460120 MMP19Q99542 508 aa19.08■□□□□ 0.64
HPS3-202ENST00000460120 FDXACB1Q9BRP7 624 aaPredicted RBP19.08■□□□□ 0.64
HPS3-202ENST00000460120 BAIAP2L1Q9UHR4 511 aa19.08■□□□□ 0.64
HPS3-202ENST00000460120 TRIM33Q9UPN9 1127 aa19.08■□□□□ 0.64
HPS3-202ENST00000460120 AKT3Q9Y243 479 aa19.08■□□□□ 0.64
HPS3-202ENST00000460120 POLR2AP24928 1970 aaKnown RBP19.07■□□□□ 0.64
HPS3-202ENST00000460120 CENPFP49454 3210 aa19.07■□□□□ 0.64
HPS3-202ENST00000460120 TCRBV7S3A2A0A539 114 aa19.07■□□□□ 0.64
HPS3-202ENST00000460120 WDR91A4D1P6 747 aa19.07■□□□□ 0.64
HPS3-202ENST00000460120 ACKR2O00590 384 aa19.07■□□□□ 0.64
HPS3-202ENST00000460120 EIF4BP23588 611 aaKnown RBP19.07■□□□□ 0.64
HPS3-202ENST00000460120 AP3M2P53677 418 aa19.07■□□□□ 0.64
HPS3-202ENST00000460120 RAD23BP54727 409 aa19.07■□□□□ 0.64
HPS3-202ENST00000460120 OASLQ15646 514 aaKnown RBP19.07■□□□□ 0.64
HPS3-202ENST00000460120 MSS51Q4VC12 460 aa19.07■□□□□ 0.64
HPS3-202ENST00000460120 SUGP1Q8IWZ8 645 aaKnown RBP19.07■□□□□ 0.64
HPS3-202ENST00000460120 FAM71DQ8N9W8 422 aa19.07■□□□□ 0.64
HPS3-202ENST00000460120 CCDC63Q8NA47 563 aa19.07■□□□□ 0.64
HPS3-202ENST00000460120 RSAD2Q8WXG1 361 aa19.07■□□□□ 0.64
HPS3-202ENST00000460120 STAG3L1P0CL83 205 aa19.07■□□□□ 0.64
HPS3-202ENST00000460120 TGFB3P10600 412 aa19.07■□□□□ 0.64
HPS3-202ENST00000460120 WDR4P57081 412 aaKnown RBP19.07■□□□□ 0.64
HPS3-202ENST00000460120 BASP1P80723 227 aaKnown RBP19.07■□□□□ 0.64
HPS3-202ENST00000460120 FNBP1LQ5T0N5 605 aa19.07■□□□□ 0.64
HPS3-202ENST00000460120 RNASEH2BQ5TBB1 312 aaKnown RBP19.07■□□□□ 0.64
HPS3-202ENST00000460120 ARHGEF18Q6ZSZ5 1173 aa19.07■□□□□ 0.64
HPS3-202ENST00000460120 UNC45BQ8IWX7 931 aa19.07■□□□□ 0.64
HPS3-202ENST00000460120 DCPSQ96C86 337 aaKnown RBP19.07■□□□□ 0.64
HPS3-202ENST00000460120 ELOVL4Q9GZR5 314 aa19.07■□□□□ 0.64
HPS3-202ENST00000460120 TRABDQ9H4I3 376 aa19.07■□□□□ 0.64
HPS3-202ENST00000460120 SLCO1B3Q9NPD5 702 aa19.07■□□□□ 0.64
HPS3-202ENST00000460120 SUN1O94901 812 aa19.06■□□□□ 0.64
HPS3-202ENST00000460120 ZNF286BP0CG31 522 aa19.06■□□□□ 0.64
HPS3-202ENST00000460120 POLR2BP30876 1174 aaKnown RBP19.06■□□□□ 0.64
HPS3-202ENST00000460120 RGS7P49802 495 aa19.06■□□□□ 0.64
HPS3-202ENST00000460120 YWHAEP62258 255 aaKnown RBP19.06■□□□□ 0.64
HPS3-202ENST00000460120 KCNJ2P63252 427 aa19.06■□□□□ 0.64
HPS3-202ENST00000460120 SLC25A11Q02978 314 aaKnown RBP19.06■□□□□ 0.64
HPS3-202ENST00000460120 MBTD1Q05BQ5 628 aa19.06■□□□□ 0.64
HPS3-202ENST00000460120 TFDP1Q14186 410 aa19.06■□□□□ 0.64
HPS3-202ENST00000460120 BBS9Q3SYG4 887 aa19.06■□□□□ 0.64
HPS3-202ENST00000460120 FAM102AQ5T9C2 384 aaPredicted RBP19.06■□□□□ 0.64
HPS3-202ENST00000460120 CGB2Q6NT52 195 aa19.06■□□□□ 0.64
HPS3-202ENST00000460120 TSHZ1Q6ZSZ6 1077 aa19.06■□□□□ 0.64
HPS3-202ENST00000460120 PIWIL1Q96J94 861 aaKnown RBP19.06■□□□□ 0.64
HPS3-202ENST00000460120 C3orf70A6NLC5 250 aaPredicted RBP19.06■□□□□ 0.64
HPS3-202ENST00000460120 MICAL2O94851 1124 aa19.06■□□□□ 0.64
HPS3-202ENST00000460120 SGSM3Q96HU1 749 aa19.06■□□□□ 0.64
HPS3-202ENST00000460120 ECT2Q9H8V3 914 aa19.06■□□□□ 0.64
HPS3-202ENST00000460120 RBPJLQ9UBG7 517 aa19.06■□□□□ 0.64
HPS3-202ENST00000460120 FAM47DPA6NHR8 397 aa19.05■□□□□ 0.64
HPS3-202ENST00000460120 RPA3P35244 121 aaPredicted RBP19.05■□□□□ 0.64
HPS3-202ENST00000460120 SNCBQ16143 134 aa19.05■□□□□ 0.64
HPS3-202ENST00000460120 HIF1AQ16665 826 aa19.05■□□□□ 0.64
HPS3-202ENST00000460120 C15orf59Q2T9L4 293 aaPredicted RBP19.05■□□□□ 0.64
HPS3-202ENST00000460120 CENPUQ71F23 418 aa19.05■□□□□ 0.64
HPS3-202ENST00000460120 XYLT1Q86Y38 959 aa19.05■□□□□ 0.64
HPS3-202ENST00000460120 GPC2Q8N158 579 aa19.05■□□□□ 0.64
HPS3-202ENST00000460120 CCDC33Q8N5R6 958 aa19.05■□□□□ 0.64
HPS3-202ENST00000460120 SLC4A11Q8NBS3 891 aa19.05■□□□□ 0.64
HPS3-202ENST00000460120 MAML1Q92585 1016 aa19.05■□□□□ 0.64
HPS3-202ENST00000460120 PRCCQ92733 491 aaPredicted RBP19.05■□□□□ 0.64
HPS3-202ENST00000460120 C2orf40Q9H1Z8 148 aa19.05■□□□□ 0.64
HPS3-202ENST00000460120 DDX56Q9NY93 547 aaKnown RBP19.05■□□□□ 0.64
HPS3-202ENST00000460120 LGALS13Q9UHV8 139 aa19.05■□□□□ 0.64
HPS3-202ENST00000460120 STK38LQ9Y2H1 464 aa19.05■□□□□ 0.64
HPS3-202ENST00000460120 CA4P22748 312 aa19.05■□□□□ 0.64
HPS3-202ENST00000460120 KDELR1P24390 212 aa19.05■□□□□ 0.64
HPS3-202ENST00000460120 MIPP30301 263 aa19.05■□□□□ 0.64
HPS3-202ENST00000460120 GCLCP48506 637 aaPredicted RBP19.05■□□□□ 0.64
HPS3-202ENST00000460120 ATP11AP98196 1134 aa19.05■□□□□ 0.64
HPS3-202ENST00000460120 C12orf29Q8N999 325 aa19.05■□□□□ 0.64
HPS3-202ENST00000460120 PITPNM3Q9BZ71 974 aa19.05■□□□□ 0.64
HPS3-202ENST00000460120 PTPRHQ9HD43 1115 aa19.05■□□□□ 0.64
HPS3-202ENST00000460120 ALG13Q9NP73 1137 aaKnown RBP19.05■□□□□ 0.64
HPS3-202ENST00000460120 GPATCH2LQ9NWQ4 482 aa19.05■□□□□ 0.64
HPS3-202ENST00000460120 CYP2C8P10632 490 aa19.04■□□□□ 0.64
HPS3-202ENST00000460120 INSRRP14616 1297 aa19.04■□□□□ 0.64
HPS3-202ENST00000460120 MYO1EQ12965 1108 aa19.04■□□□□ 0.64
HPS3-202ENST00000460120 MKRN3Q13064 507 aaKnown RBP19.04■□□□□ 0.64
HPS3-202ENST00000460120 HADHQ16836 314 aaKnown RBP19.04■□□□□ 0.64
HPS3-202ENST00000460120 SCYL2Q6P3W7 929 aa19.04■□□□□ 0.64
HPS3-202ENST00000460120 C1orf228Q6PIY5 440 aa19.04■□□□□ 0.64
HPS3-202ENST00000460120 TRABD2AQ86V40 505 aa19.04■□□□□ 0.64
HPS3-202ENST00000460120 ADPGKQ9BRR6 497 aa19.04■□□□□ 0.64
HPS3-202ENST00000460120 GRID1Q9ULK0 1009 aa19.04■□□□□ 0.64
HPS3-202ENST00000460120 PCDHGC3Q9UN70 934 aa19.04■□□□□ 0.64
HPS3-202ENST00000460120 SLC12A4Q9UP95 1085 aa19.04■□□□□ 0.64
HPS3-202ENST00000460120 SIGLEC16A6NMB1 481 aa19.04■□□□□ 0.64
HPS3-202ENST00000460120 GHRP10912 638 aa19.04■□□□□ 0.64
HPS3-202ENST00000460120 TAC1P20366 129 aa19.04■□□□□ 0.64
HPS3-202ENST00000460120 RPL22P35268 128 aaKnown RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms