RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 PSMC5P62195 406 aa8.93□□□□□ -0.98
VPS50-208ENST00000458707 DMP1Q13316 513 aaPredicted RBP8.93□□□□□ -0.98
VPS50-208ENST00000458707 DSG2Q14126 1118 aa8.93□□□□□ -0.98
VPS50-208ENST00000458707 KRT72Q14CN4 511 aa8.93□□□□□ -0.98
VPS50-208ENST00000458707 WDR72Q3MJ13 1102 aa8.93□□□□□ -0.98
VPS50-208ENST00000458707 ZACNQ401N2 412 aa8.93□□□□□ -0.98
VPS50-208ENST00000458707 KHDC1Q4VXA5 237 aaKnown RBP8.93□□□□□ -0.98
VPS50-208ENST00000458707 C2CD6Q53TS8 623 aa8.93□□□□□ -0.98
VPS50-208ENST00000458707 FAM102BQ5T8I3 360 aa8.93□□□□□ -0.98
VPS50-208ENST00000458707 PCGF5Q86SE9 256 aa8.93□□□□□ -0.98
VPS50-208ENST00000458707 NLRX1Q86UT6 975 aa8.93□□□□□ -0.98
VPS50-208ENST00000458707 MFN1Q8IWA4 741 aa8.93□□□□□ -0.98
VPS50-208ENST00000458707 ZBED8Q8IZ13 594 aa8.93□□□□□ -0.98
VPS50-208ENST00000458707 SAMD3Q8N6K7 520 aa8.93□□□□□ -0.98
VPS50-208ENST00000458707 IL31RAQ8NI17 732 aa8.93□□□□□ -0.98
VPS50-208ENST00000458707 POMGNT1Q8WZA1 660 aa8.93□□□□□ -0.98
VPS50-208ENST00000458707 SKA1Q96BD8 255 aa8.93□□□□□ -0.98
VPS50-208ENST00000458707 IFT43Q96FT9 208 aa8.93□□□□□ -0.98
VPS50-208ENST00000458707 SENP7Q9BQF6 1050 aa8.93□□□□□ -0.98
VPS50-208ENST00000458707 C11orf70Q9BRQ4 267 aa8.93□□□□□ -0.98
VPS50-208ENST00000458707 ACSS3Q9H6R3 686 aa8.93□□□□□ -0.98
VPS50-208ENST00000458707 DBNDD1Q9H9R9 158 aa8.93□□□□□ -0.98
VPS50-208ENST00000458707 NPHS2Q9NP85 383 aa8.93□□□□□ -0.98
VPS50-208ENST00000458707 ZNF148Q9UQR1 794 aa8.93□□□□□ -0.98
VPS50-208ENST00000458707 CLUHO75153 1309 aa8.93□□□□□ -0.98
VPS50-208ENST00000458707 TMEM150BA6NC51 233 aa8.92□□□□□ -0.98
VPS50-208ENST00000458707 ENO4A6NNW6 628 aa8.92□□□□□ -0.98
VPS50-208ENST00000458707 E7ESA3 106 aa8.92□□□□□ -0.98
VPS50-208ENST00000458707 H0Y3Z8 333 aa8.92□□□□□ -0.98
VPS50-208ENST00000458707 C4BPAP04003 597 aaKnown RBP8.92□□□□□ -0.98
VPS50-208ENST00000458707 ZSCAN5DPP0CG00 497 aa8.92□□□□□ -0.98
VPS50-208ENST00000458707 DHRS4L1P0CG22 281 aa8.92□□□□□ -0.98
VPS50-208ENST00000458707 KRT10P13645 584 aa8.92□□□□□ -0.98
VPS50-208ENST00000458707 ETS1P14921 441 aa8.92□□□□□ -0.98
VPS50-208ENST00000458707 TSHRP16473 764 aa8.92□□□□□ -0.98
VPS50-208ENST00000458707 SP100P23497 879 aaPredicted RBP8.92□□□□□ -0.98
VPS50-208ENST00000458707 ADRA1DP25100 572 aa8.92□□□□□ -0.98
VPS50-208ENST00000458707 PHBP35232 272 aa8.92□□□□□ -0.98
VPS50-208ENST00000458707 JAK3P52333 1124 aa8.92□□□□□ -0.98
VPS50-208ENST00000458707 MRPS9P82933 396 aaKnown RBP8.92□□□□□ -0.98
VPS50-208ENST00000458707 PDIA2Q13087 525 aaKnown RBP8.92□□□□□ -0.98
VPS50-208ENST00000458707 MUM1Q2TAK8 710 aa8.92□□□□□ -0.98
VPS50-208ENST00000458707 BRDTQ58F21 947 aaPredicted RBP8.92□□□□□ -0.98
VPS50-208ENST00000458707 XKR9Q5GH70 373 aa8.92□□□□□ -0.98
VPS50-208ENST00000458707 FAM182BQ5T319 152 aa8.92□□□□□ -0.98
VPS50-208ENST00000458707 MFSD4BQ5TF39 518 aa8.92□□□□□ -0.98
VPS50-208ENST00000458707 OR52E8Q6IFG1 317 aa8.92□□□□□ -0.98
VPS50-208ENST00000458707 RFWD3Q6PCD5 774 aa8.92□□□□□ -0.98
VPS50-208ENST00000458707 SLC30A9Q6PML9 568 aa8.92□□□□□ -0.98
VPS50-208ENST00000458707 MFSD7Q6UXD7 560 aa8.92□□□□□ -0.98
VPS50-208ENST00000458707 DSTYKQ6XUX3 929 aa8.92□□□□□ -0.98
VPS50-208ENST00000458707 SPOCD1Q6ZMY3 1216 aa8.92□□□□□ -0.98
VPS50-208ENST00000458707 PHLDB2Q86SQ0 1253 aa8.92□□□□□ -0.98
VPS50-208ENST00000458707 CHSY1Q86X52 802 aa8.92□□□□□ -0.98
VPS50-208ENST00000458707 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.92□□□□□ -0.98
VPS50-208ENST00000458707 BANPQ8N9N5 519 aa8.92□□□□□ -0.98
VPS50-208ENST00000458707 ZFAND2BQ8WV99 257 aa8.92□□□□□ -0.98
VPS50-208ENST00000458707 ELMO3Q96BJ8 720 aa8.92□□□□□ -0.98
VPS50-208ENST00000458707 BICD1Q96G01 975 aa8.92□□□□□ -0.98
VPS50-208ENST00000458707 NSL1Q96IY1 281 aa8.92□□□□□ -0.98
VPS50-208ENST00000458707 CSRNP1Q96S65 589 aa8.92□□□□□ -0.98
VPS50-208ENST00000458707 TSC22D3Q99576 134 aa8.92□□□□□ -0.98
VPS50-208ENST00000458707 SH2D3AQ9BRG2 576 aa8.92□□□□□ -0.98
VPS50-208ENST00000458707 TDRD3Q9H7E2 651 aaKnown RBP8.92□□□□□ -0.98
VPS50-208ENST00000458707 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.92□□□□□ -0.98
VPS50-208ENST00000458707 KMT5AQ9NQR1 393 aa8.92□□□□□ -0.98
VPS50-208ENST00000458707 PARVAQ9NVD7 372 aa8.92□□□□□ -0.98
VPS50-208ENST00000458707 PKD2L1Q9P0L9 805 aa8.92□□□□□ -0.98
VPS50-208ENST00000458707 FEM1BQ9UK73 627 aa8.92□□□□□ -0.98
VPS50-208ENST00000458707 hCG_1818297A0A087WSY0 165 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 TCRBV5S1A1TA0A578 114 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 TMEM191CA6NGB0 347 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 SPDYE5A6NIY4 337 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 HAUS5O94927 633 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 ICAM1P05362 532 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 PDHA1P08559 390 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 CFHP08603 1231 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 TMEM191BP0C7N4 346 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 GLRA2P23416 452 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 TPP2P29144 1249 aaPredicted RBP8.91□□□□□ -0.98
VPS50-208ENST00000458707 SFNP31947 248 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 RTP1P59025 263 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 MXRA7P84157 204 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 ZNF252P-AS1Q0IIN9 211 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 MTMR1Q13613 665 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 PSMD6Q15008 389 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 HIF1AQ16665 826 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 KLHL38Q2WGJ6 581 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 ATP13A4Q4VNC1 1196 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 ACSBG2Q5FVE4 666 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 TFDP3Q5H9I0 405 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 WDR44Q5JSH3 913 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 THEMIS2Q5TEJ8 643 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 SNX30Q5VWJ9 437 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 TMEM154Q6P9G4 183 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 CACTIN-AS1Q8N1I8 211 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 ATP11CQ8NB49 1132 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 RFWD2Q8NHY2 731 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 SLC35B2Q8TB61 432 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 TCP10LQ8TDR4 215 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms