RNA–Protein interactions for RNA: ENST00000458640.5

DDX39B-214, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-214ENST00000458640 DNAJC1Q96KC8 554 aaKnown RBP11.91□□□□□ -0.5
DDX39B-214ENST00000458640 SRPK1Q96SB4 655 aaKnown RBP11.91□□□□□ -0.5
DDX39B-214ENST00000458640 SEMA4AQ9H3S1 761 aa11.91□□□□□ -0.5
DDX39B-214ENST00000458640 MMRN2Q9H8L6 949 aa11.91□□□□□ -0.5
DDX39B-214ENST00000458640 DBR1Q9UK59 544 aaKnown RBP11.91□□□□□ -0.5
DDX39B-214ENST00000458640 FZD1Q9UP38 647 aa11.91□□□□□ -0.5
DDX39B-214ENST00000458640 PRELID1Q9Y255 219 aa11.91□□□□□ -0.5
DDX39B-214ENST00000458640 COQ6Q9Y2Z9 468 aa11.91□□□□□ -0.5
DDX39B-214ENST00000458640 SNCAIPQ9Y6H5 919 aa11.91□□□□□ -0.5
DDX39B-214ENST00000458640 LOC285556D6RIA3 1793 aa11.9□□□□□ -0.5
DDX39B-214ENST00000458640 COL11A1P12107 1806 aaPredicted RBP11.9□□□□□ -0.5
DDX39B-214ENST00000458640 TTC34A8MYJ7 566 aa11.9□□□□□ -0.5
DDX39B-214ENST00000458640 RASA4BC9J798 803 aa11.9□□□□□ -0.5
DDX39B-214ENST00000458640 RASA4O43374 803 aa11.9□□□□□ -0.5
DDX39B-214ENST00000458640 KLRC4O43908 158 aa11.9□□□□□ -0.5
DDX39B-214ENST00000458640 CNOT3O75175 753 aaKnown RBP11.9□□□□□ -0.5
DDX39B-214ENST00000458640 CHRNA3P32297 505 aa11.9□□□□□ -0.5
DDX39B-214ENST00000458640 PLTPP55058 493 aa11.9□□□□□ -0.5
DDX39B-214ENST00000458640 LRRC63Q05C16 580 aa11.9□□□□□ -0.5
DDX39B-214ENST00000458640 MAPK7Q13164 816 aa11.9□□□□□ -0.5
DDX39B-214ENST00000458640 SEPT7Q16181 437 aaKnown RBP11.9□□□□□ -0.5
DDX39B-214ENST00000458640 TMEM119Q4V9L6 283 aa11.9□□□□□ -0.5
DDX39B-214ENST00000458640 HYIQ5T013 277 aa11.9□□□□□ -0.5
DDX39B-214ENST00000458640 UGT2A3Q6UWM9 527 aa11.9□□□□□ -0.5
DDX39B-214ENST00000458640 ANKRD13AQ8IZ07 590 aa11.9□□□□□ -0.5
DDX39B-214ENST00000458640 MARVELD2Q8N4S9 558 aa11.9□□□□□ -0.5
DDX39B-214ENST00000458640 KCTD17Q8N5Z5 321 aa11.9□□□□□ -0.5
DDX39B-214ENST00000458640 MGARPQ8TDB4 240 aa11.9□□□□□ -0.5
DDX39B-214ENST00000458640 RAD54LQ92698 747 aa11.9□□□□□ -0.5
DDX39B-214ENST00000458640 ATG4CQ96DT6 458 aa11.9□□□□□ -0.5
DDX39B-214ENST00000458640 HES6Q96HZ4 224 aa11.9□□□□□ -0.5
DDX39B-214ENST00000458640 TTC25Q96NG3 672 aa11.9□□□□□ -0.5
DDX39B-214ENST00000458640 C7orf25Q9BPX7 421 aa11.9□□□□□ -0.5
DDX39B-214ENST00000458640 OSBPL6Q9BZF3 934 aa11.9□□□□□ -0.5
DDX39B-214ENST00000458640 TRIM9Q9C026 710 aa11.9□□□□□ -0.5
DDX39B-214ENST00000458640 CYLDQ9NQC7 956 aa11.9□□□□□ -0.5
DDX39B-214ENST00000458640 HOXC10Q9NYD6 342 aa11.9□□□□□ -0.5
DDX39B-214ENST00000458640 N6AMT1Q9Y5N5 214 aa11.9□□□□□ -0.5
DDX39B-214ENST00000458640 RLFQ13129 1914 aa11.9□□□□□ -0.5
DDX39B-214ENST00000458640 NFIBO00712 420 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 DENRO43583 198 aaKnown RBP11.89□□□□□ -0.51
DDX39B-214ENST00000458640 MTRF1O75570 445 aaKnown RBP11.89□□□□□ -0.51
DDX39B-214ENST00000458640 TFAP2AP05549 437 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 VCLP18206 1134 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 DSG3P32926 999 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 NR1H2P55055 460 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 ASIC1P78348 528 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 THOC5Q13769 683 aaKnown RBP11.89□□□□□ -0.51
DDX39B-214ENST00000458640 PDK3Q15120 406 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 TKFCQ3LXA3 575 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 CEP55Q53EZ4 464 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 FBXO25Q8TCJ0 367 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 CLEC4DQ8WXI8 215 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 USP6NLQ92738 828 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 CDCA5Q96FF9 252 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 PNMA5Q96PV4 448 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 PPP1R10Q96QC0 940 aaKnown RBP11.89□□□□□ -0.51
DDX39B-214ENST00000458640 HEPHQ9BQS7 1158 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 CCDC68Q9H2F9 335 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 DDX18Q9NVP1 670 aaKnown RBP11.89□□□□□ -0.51
DDX39B-214ENST00000458640 GIN1Q9NXP7 522 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 PCYOX1Q9UHG3 505 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 PACSIN2Q9UNF0 486 aaPredicted RBP11.89□□□□□ -0.51
DDX39B-214ENST00000458640 IGLV3-22A0A075B6J6 115 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 FAM47DPA6NHR8 397 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 ATP2A1O14983 1001 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 MSH4O15457 936 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 BUD23O43709 281 aaKnown RBP11.89□□□□□ -0.51
DDX39B-214ENST00000458640 HAUS5O94927 633 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 CBX6O95503 412 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 GGPS1O95749 300 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 MSL3P1P0C860 447 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 ENDOUP21128 410 aaKnown RBP11.89□□□□□ -0.51
DDX39B-214ENST00000458640 TKTP29401 623 aaKnown RBP11.89□□□□□ -0.51
DDX39B-214ENST00000458640 ACTR3P61158 418 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 NAA20P61599 178 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 PPATQ06203 517 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 SPARCL1Q14515 664 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 TGFBIQ15582 683 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 PDK4Q16654 411 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 CCDC14Q49A88 953 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 CNNM4Q6P4Q7 775 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 RNF207Q6ZRF8 634 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 CATSPERGQ6ZRH7 1159 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 LRRC6Q86X45 466 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 ERO1BQ86YB8 467 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 JAMLQ86YT9 394 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 AHI1Q8N157 1196 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 CACTIN-AS1Q8N1I8 211 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 ANKRD42Q8N9B4 389 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 TPCN2Q8NHX9 752 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 ZFP28Q8NHY6 868 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 DTX3LQ8TDB6 740 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 PRPF31Q8WWY3 499 aaKnown RBP11.89□□□□□ -0.51
DDX39B-214ENST00000458640 CCDC77Q9BR77 488 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 TEX13BQ9BXU2 312 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 WDR11Q9BZH6 1224 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 KLHL4Q9C0H6 718 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 EBF3Q9H4W6 596 aa11.89□□□□□ -0.51
DDX39B-214ENST00000458640 ZNF696Q9H7X3 374 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms