RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 MFSD10Q14728 455 aa17.11■□□□□ 0.33
LSS-205ENST00000457828 CDO1Q16878 200 aa17.11■□□□□ 0.33
LSS-205ENST00000457828 GLRA4Q5JXX5 417 aa17.11■□□□□ 0.33
LSS-205ENST00000457828 ATP11CQ8NB49 1132 aa17.11■□□□□ 0.33
LSS-205ENST00000457828 SMYD3Q9H7B4 428 aa17.11■□□□□ 0.33
LSS-205ENST00000457828 PDGFCQ9NRA1 345 aa17.11■□□□□ 0.33
LSS-205ENST00000457828 A0A0G2JLL6 359 aaPredicted RBP17.1■□□□□ 0.33
LSS-205ENST00000457828 LMNAP02545 664 aaKnown RBP17.1■□□□□ 0.33
LSS-205ENST00000457828 SKIV2LQ15477 1246 aaKnown RBP17.1■□□□□ 0.33
LSS-205ENST00000457828 PRRT2Q7Z6L0 340 aaPredicted RBP17.1■□□□□ 0.33
LSS-205ENST00000457828 NAF1Q96HR8 494 aaKnown RBP17.1■□□□□ 0.33
LSS-205ENST00000457828 SENP6Q9GZR1 1112 aaPredicted RBP17.1■□□□□ 0.33
LSS-205ENST00000457828 MARCOQ9UEW3 520 aaPredicted RBP17.1■□□□□ 0.33
LSS-205ENST00000457828 BAZ2AQ9UIF9 1905 aaKnown RBP17.1■□□□□ 0.33
LSS-205ENST00000457828 COL18A1P39060 1754 aa17.1■□□□□ 0.33
LSS-205ENST00000457828 LGALS2P05162 132 aa17.1■□□□□ 0.33
LSS-205ENST00000457828 CCDC60Q8IWA6 550 aaPredicted RBP17.1■□□□□ 0.33
LSS-205ENST00000457828 ATP2A3Q93084 1043 aa17.1■□□□□ 0.33
LSS-205ENST00000457828 ZBTB10Q96DT7 871 aa17.1■□□□□ 0.33
LSS-205ENST00000457828 KDSRQ06136 332 aa17.1■□□□□ 0.33
LSS-205ENST00000457828 CCDC97Q96F63 343 aaPredicted RBP17.1■□□□□ 0.33
LSS-205ENST00000457828 A8MUI8 341 aa17.1■□□□□ 0.33
LSS-205ENST00000457828 O00370 1275 aa17.1■□□□□ 0.33
LSS-205ENST00000457828 AOC2O75106 756 aa17.1■□□□□ 0.33
LSS-205ENST00000457828 KRT16P08779 473 aa17.1■□□□□ 0.33
LSS-205ENST00000457828 CHKAP35790 457 aa17.1■□□□□ 0.33
LSS-205ENST00000457828 PSEN2P49810 448 aa17.1■□□□□ 0.33
LSS-205ENST00000457828 ANKRD20A2Q5SQ80 823 aa17.1■□□□□ 0.33
LSS-205ENST00000457828 ANKRD20A1Q5TYW2 823 aa17.1■□□□□ 0.33
LSS-205ENST00000457828 DAB2IPQ5VWQ8 1189 aa17.1■□□□□ 0.33
LSS-205ENST00000457828 PRUNE1Q86TP1 453 aa17.1■□□□□ 0.33
LSS-205ENST00000457828 PPP4R1Q8TF05 950 aa17.1■□□□□ 0.33
LSS-205ENST00000457828 TUBB6Q9BUF5 446 aa17.1■□□□□ 0.33
LSS-205ENST00000457828 NINJ2Q9NZG7 142 aa17.1■□□□□ 0.33
LSS-205ENST00000457828 SENP1Q9P0U3 644 aa17.1■□□□□ 0.33
LSS-205ENST00000457828 BTAF1O14981 1849 aa17.09■□□□□ 0.33
LSS-205ENST00000457828 DDX3YO15523 660 aaKnown RBP17.09■□□□□ 0.33
LSS-205ENST00000457828 STK10O94804 968 aaKnown RBP17.09■□□□□ 0.33
LSS-205ENST00000457828 CBX6O95503 412 aa17.09■□□□□ 0.33
LSS-205ENST00000457828 OR1G1P47890 313 aa17.09■□□□□ 0.33
LSS-205ENST00000457828 TMEM35BQ8NCS4 154 aa17.09■□□□□ 0.33
LSS-205ENST00000457828 ATXN2LQ8WWM7 1075 aaKnown RBP17.09■□□□□ 0.33
LSS-205ENST00000457828 SENP7Q9BQF6 1050 aa17.09■□□□□ 0.33
LSS-205ENST00000457828 TMEM8AQ9HCN3 771 aa17.09■□□□□ 0.33
LSS-205ENST00000457828 COG5Q9UP83 839 aa17.09■□□□□ 0.33
LSS-205ENST00000457828 PCDHB2Q9Y5E7 798 aa17.09■□□□□ 0.33
LSS-205ENST00000457828 NVLO15381 856 aaKnown RBP17.09■□□□□ 0.33
LSS-205ENST00000457828 MUTP22033 750 aa17.09■□□□□ 0.33
LSS-205ENST00000457828 NAMPTP43490 491 aa17.09■□□□□ 0.33
LSS-205ENST00000457828 JAG1P78504 1218 aa17.09■□□□□ 0.33
LSS-205ENST00000457828 RBP5P82980 135 aa17.09■□□□□ 0.33
LSS-205ENST00000457828 PSMD6Q15008 389 aa17.09■□□□□ 0.33
LSS-205ENST00000457828 CELF3Q5SZQ8 465 aaKnown RBP17.09■□□□□ 0.33
LSS-205ENST00000457828 C1orf146Q5VVC0 180 aa17.09■□□□□ 0.33
LSS-205ENST00000457828 C3orf62Q6ZUJ4 267 aa17.09■□□□□ 0.33
LSS-205ENST00000457828 NLRP9Q7RTR0 991 aa17.09■□□□□ 0.33
LSS-205ENST00000457828 PSMC3IPQ9P2W1 217 aaPredicted RBP17.09■□□□□ 0.33
LSS-205ENST00000457828 IP6K2Q9UHH9 426 aa17.09■□□□□ 0.33
LSS-205ENST00000457828 IGKV6D-41A0A0C4DH26 115 aa17.09■□□□□ 0.33
LSS-205ENST00000457828 P4HA2O15460 535 aa17.09■□□□□ 0.33
LSS-205ENST00000457828 ZWINTO95229 277 aa17.09■□□□□ 0.33
LSS-205ENST00000457828 CREB1P16220 341 aa17.09■□□□□ 0.33
LSS-205ENST00000457828 CTCFP49711 727 aaPredicted RBP17.09■□□□□ 0.33
LSS-205ENST00000457828 EPHB1P54762 984 aa17.09■□□□□ 0.33
LSS-205ENST00000457828 IRX1P78414 480 aaPredicted RBP17.09■□□□□ 0.33
LSS-205ENST00000457828 NOL9Q5SY16 702 aaKnown RBP17.09■□□□□ 0.33
LSS-205ENST00000457828 TSSK1BQ9BXA7 367 aa17.09■□□□□ 0.33
LSS-205ENST00000457828 NGRNQ9NPE2 291 aaKnown RBP17.09■□□□□ 0.33
LSS-205ENST00000457828 PCDHA3Q9Y5H8 950 aa17.09■□□□□ 0.33
LSS-205ENST00000457828 UBE4BO95155 1302 aa17.08■□□□□ 0.33
LSS-205ENST00000457828 PKD1L3Q7Z443 1732 aa17.08■□□□□ 0.33
LSS-205ENST00000457828 A6NJR5 290 aa17.08■□□□□ 0.33
LSS-205ENST00000457828 GPR182O15218 404 aa17.08■□□□□ 0.33
LSS-205ENST00000457828 TBXAS1P24557 533 aaPredicted RBP17.08■□□□□ 0.33
LSS-205ENST00000457828 PGM1P36871 562 aa17.08■□□□□ 0.33
LSS-205ENST00000457828 PDE1BQ01064 536 aa17.08■□□□□ 0.33
LSS-205ENST00000457828 NCOA4Q13772 614 aa17.08■□□□□ 0.33
LSS-205ENST00000457828 SMTNL2Q2TAL5 461 aa17.08■□□□□ 0.33
LSS-205ENST00000457828 KLHL38Q2WGJ6 581 aa17.08■□□□□ 0.33
LSS-205ENST00000457828 FOXR2Q6PJQ5 311 aa17.08■□□□□ 0.33
LSS-205ENST00000457828 NME8Q8N427 588 aa17.08■□□□□ 0.33
LSS-205ENST00000457828 EPS8L1Q8TE68 723 aa17.08■□□□□ 0.33
LSS-205ENST00000457828 FAF2Q96CS3 445 aa17.08■□□□□ 0.33
LSS-205ENST00000457828 MCEEQ96PE7 176 aa17.08■□□□□ 0.33
LSS-205ENST00000457828 G3BP2Q9UN86 482 aaKnown RBP17.08■□□□□ 0.33
LSS-205ENST00000457828 UBIAD1Q9Y5Z9 338 aa17.08■□□□□ 0.33
LSS-205ENST00000457828 NCALDP61601 193 aa17.08■□□□□ 0.32
LSS-205ENST00000457828 PPP2R5CQ13362 524 aa17.08■□□□□ 0.32
LSS-205ENST00000457828 LRRC36Q1X8D7 754 aa17.08■□□□□ 0.32
LSS-205ENST00000457828 DEFB118Q96PH6 123 aa17.08■□□□□ 0.32
LSS-205ENST00000457828 ANGPTL2Q9UKU9 493 aa17.08■□□□□ 0.32
LSS-205ENST00000457828 CA12O43570 354 aa17.08■□□□□ 0.32
LSS-205ENST00000457828 ENO1P06733 434 aaKnown RBP17.08■□□□□ 0.32
LSS-205ENST00000457828 ADORA2BP29275 332 aa17.08■□□□□ 0.32
LSS-205ENST00000457828 AP3M2P53677 418 aa17.08■□□□□ 0.32
LSS-205ENST00000457828 LAMTOR4Q0VGL1 99 aa17.08■□□□□ 0.32
LSS-205ENST00000457828 CRHR2Q13324 411 aa17.08■□□□□ 0.32
LSS-205ENST00000457828 C1orf186Q6ZWK4 172 aa17.08■□□□□ 0.32
LSS-205ENST00000457828 PARVAQ9NVD7 372 aa17.08■□□□□ 0.32
LSS-205ENST00000457828 PCYOX1Q9UHG3 505 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms