RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 TPBGLP0DKB5 382 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 SPATA31C1P0DKV0 1188 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 PYGMP11217 842 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 IDEP14735 1019 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 MUTP22033 750 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 PSMA4P25789 261 aaKnown RBP7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 RPA1P27694 616 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 CRABP2P29373 138 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 CASP1P29466 404 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 RPL9P32969 192 aaKnown RBP7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 ZNF76P36508 570 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 VHLP40337 213 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 HAAOP46952 286 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 CENPAP49450 140 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 HNRNPFP52597 415 aaKnown RBP7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 POLR2FP61218 127 aaKnown RBP7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 KCNC4Q03721 635 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 STK4Q13043 487 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 BAATQ14032 418 aaPredicted RBP7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 SQLEQ14534 574 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 HAUS3Q68CZ6 603 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 SPECC1LQ69YQ0 1117 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 FAM122CQ6P4D5 195 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 ZNF600Q6ZNG1 722 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 OTOP1Q7RTM1 612 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 KCNK18Q7Z418 384 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 LIMS2Q7Z4I7 341 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 C14orf80Q86SX3 495 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 VSIG10LQ86VR7 867 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 SPATA24Q86W54 205 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 ALLCQ8N6M5 410 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 ATP6V0D2Q8N8Y2 350 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 CALML6Q8TD86 181 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 TMC2Q8TDI7 906 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 HCAR2Q8TDS4 363 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 PYROXD1Q8WU10 500 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 GTF3C2Q8WUA4 911 aaPredicted RBP7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 RASSF5Q8WWW0 418 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 LARP4BQ92615 738 aaKnown RBP7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 RAD54LQ92698 747 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 ABTB1Q969K4 478 aaPredicted RBP7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 INTS12Q96CB8 462 aaKnown RBP7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 FNBP1Q96RU3 617 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 RMDN3Q96TC7 470 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 RIT2Q99578 217 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 HEPHQ9BQS7 1158 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 RHOXF2Q9BQY4 288 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 IFIH1Q9BYX4 1025 aaKnown RBP7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 SPATC1LQ9H0A9 340 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 HSD3B7Q9H2F3 369 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 DCLRE1BQ9H816 532 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 PALMDQ9NP74 551 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 NMRK2Q9NPI5 230 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 DDX56Q9NY93 547 aaKnown RBP7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 MBD2Q9UBB5 411 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 MTRF1LQ9UGC7 380 aaKnown RBP7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 HMGXB4Q9UGU5 601 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 FBXO40Q9UH90 709 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 DNAJC16Q9Y2G8 782 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 BOLA1Q9Y3E2 137 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 PFASO15067 1338 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 O00370 1275 aa7.16□□□□□ -1.26
CUBNP3-201ENST00000457461 EML1O00423 815 aa7.16□□□□□ -1.26
CUBNP3-201ENST00000457461 DPYSL4O14531 572 aa7.16□□□□□ -1.26
CUBNP3-201ENST00000457461 XPO1O14980 1071 aaKnown RBP7.16□□□□□ -1.26
CUBNP3-201ENST00000457461 PFDN6O15212 129 aa7.16□□□□□ -1.26
CUBNP3-201ENST00000457461 TLR3O15455 904 aaKnown RBP7.16□□□□□ -1.26
CUBNP3-201ENST00000457461 MED24O75448 989 aa7.16□□□□□ -1.26
CUBNP3-201ENST00000457461 DAB1O75553 588 aa7.16□□□□□ -1.26
CUBNP3-201ENST00000457461 GABBR2O75899 941 aa7.16□□□□□ -1.26
CUBNP3-201ENST00000457461 KLHL2O95198 593 aa7.16□□□□□ -1.26
CUBNP3-201ENST00000457461 ECDO95905 644 aaPredicted RBP7.16□□□□□ -1.26
CUBNP3-201ENST00000457461 ZBTB48P10074 688 aaPredicted RBP7.16□□□□□ -1.26
CUBNP3-201ENST00000457461 ARP10275 920 aa7.16□□□□□ -1.26
CUBNP3-201ENST00000457461 CDK4P11802 303 aa7.16□□□□□ -1.26
CUBNP3-201ENST00000457461 PABPC1P11940 636 aaKnown RBP7.16□□□□□ -1.26
CUBNP3-201ENST00000457461 ETFBP38117 255 aa7.16□□□□□ -1.26
CUBNP3-201ENST00000457461 MLLT3P42568 568 aaPredicted RBP7.16□□□□□ -1.26
CUBNP3-201ENST00000457461 SLC1A1P43005 524 aa7.16□□□□□ -1.26
CUBNP3-201ENST00000457461 GSSP48637 474 aa7.16□□□□□ -1.26
CUBNP3-201ENST00000457461 ALDH5A1P51649 535 aaPredicted RBP7.16□□□□□ -1.26
CUBNP3-201ENST00000457461 ARFIP2P53365 341 aa7.16□□□□□ -1.26
CUBNP3-201ENST00000457461 ATP6V0D1P61421 351 aa7.16□□□□□ -1.26
CUBNP3-201ENST00000457461 PFKPQ01813 784 aa7.16□□□□□ -1.26
CUBNP3-201ENST00000457461 EHHADHQ08426 723 aa7.16□□□□□ -1.26
CUBNP3-201ENST00000457461 HLTFQ14527 1009 aaKnown RBP eCLIP7.16□□□□□ -1.26
CUBNP3-201ENST00000457461 KLHL38Q2WGJ6 581 aa7.16□□□□□ -1.26
CUBNP3-201ENST00000457461 FBXO43Q4G163 708 aa7.16□□□□□ -1.26
CUBNP3-201ENST00000457461 AGBL2Q5U5Z8 902 aa7.16□□□□□ -1.26
CUBNP3-201ENST00000457461 NSMFQ6X4W1 530 aa7.16□□□□□ -1.26
CUBNP3-201ENST00000457461 TRPM8Q7Z2W7 1104 aa7.16□□□□□ -1.26
CUBNP3-201ENST00000457461 TRAPPC11Q7Z392 1133 aa7.16□□□□□ -1.26
CUBNP3-201ENST00000457461 CPSF7Q8N684 471 aaKnown RBP7.16□□□□□ -1.26
CUBNP3-201ENST00000457461 AOPEPQ8N6M6 819 aa7.16□□□□□ -1.26
CUBNP3-201ENST00000457461 DNERQ8NFT8 737 aa7.16□□□□□ -1.26
CUBNP3-201ENST00000457461 RIN2Q8WYP3 895 aaPredicted RBP7.16□□□□□ -1.26
CUBNP3-201ENST00000457461 STAMQ92783 540 aa7.16□□□□□ -1.26
CUBNP3-201ENST00000457461 SLC10A4Q96EP9 437 aa7.16□□□□□ -1.26
CUBNP3-201ENST00000457461 CCDC51Q96ER9 411 aa7.16□□□□□ -1.26
CUBNP3-201ENST00000457461 INPP4AQ96PE3 977 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms