RNA–Protein interactions for RNA: ENST00000455385.6

SYPL1-202, Transcript of synaptophysin like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYPL1, Length 2,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-202ENST00000455385 ZNF571Q7Z3V5 609 aaPredicted RBP11.41□□□□□ -0.58
SYPL1-202ENST00000455385 DCP1BQ8IZD4 617 aaKnown RBP11.41□□□□□ -0.58
SYPL1-202ENST00000455385 TTC9BQ8N6N2 239 aa11.41□□□□□ -0.58
SYPL1-202ENST00000455385 ZNF461Q8TAF7 563 aa11.41□□□□□ -0.58
SYPL1-202ENST00000455385 SLC2A14Q8TDB8 520 aa11.41□□□□□ -0.58
SYPL1-202ENST00000455385 ANP32BQ92688 251 aaKnown RBP11.41□□□□□ -0.58
SYPL1-202ENST00000455385 MYLPFQ96A32 169 aa11.41□□□□□ -0.58
SYPL1-202ENST00000455385 FAM161BQ96MY7 647 aa11.41□□□□□ -0.58
SYPL1-202ENST00000455385 OXCT2Q9BYC2 517 aaPredicted RBP11.41□□□□□ -0.58
SYPL1-202ENST00000455385 ZNF518BQ9C0D4 1074 aa11.41□□□□□ -0.58
SYPL1-202ENST00000455385 TMEM30AQ9NV96 361 aa11.41□□□□□ -0.58
SYPL1-202ENST00000455385 ARHGAP20Q9P2F6 1191 aa11.41□□□□□ -0.58
SYPL1-202ENST00000455385 MTMR11A4FU01 709 aa11.4□□□□□ -0.58
SYPL1-202ENST00000455385 MMEP08473 750 aa11.4□□□□□ -0.58
SYPL1-202ENST00000455385 SPATA31D3P0C874 917 aa11.4□□□□□ -0.58
SYPL1-202ENST00000455385 ADORA2BP29275 332 aa11.4□□□□□ -0.58
SYPL1-202ENST00000455385 NDUFV1P49821 464 aa11.4□□□□□ -0.58
SYPL1-202ENST00000455385 CYP27A1Q02318 531 aa11.4□□□□□ -0.58
SYPL1-202ENST00000455385 KLHL30Q0D2K2 578 aa11.4□□□□□ -0.58
SYPL1-202ENST00000455385 ADGRE1Q14246 886 aa11.4□□□□□ -0.58
SYPL1-202ENST00000455385 MEA1Q16626 185 aa11.4□□□□□ -0.58
SYPL1-202ENST00000455385 TAF3Q5VWG9 929 aa11.4□□□□□ -0.58
SYPL1-202ENST00000455385 PDE12Q6L8Q7 609 aaKnown RBP11.4□□□□□ -0.58
SYPL1-202ENST00000455385 LILRA6Q6PI73 481 aa11.4□□□□□ -0.58
SYPL1-202ENST00000455385 LCLAT1Q6UWP7 414 aa11.4□□□□□ -0.58
SYPL1-202ENST00000455385 SPATA31D4Q6ZUB0 917 aa11.4□□□□□ -0.58
SYPL1-202ENST00000455385 RBM23Q86U06 439 aaKnown RBP11.4□□□□□ -0.58
SYPL1-202ENST00000455385 TTC30AQ86WT1 665 aa11.4□□□□□ -0.58
SYPL1-202ENST00000455385 MRPL38Q96DV4 380 aaKnown RBP11.4□□□□□ -0.58
SYPL1-202ENST00000455385 PCDHB18PQ96TA0 734 aa11.4□□□□□ -0.58
SYPL1-202ENST00000455385 HNRNPABQ99729 332 aaKnown RBP11.4□□□□□ -0.58
SYPL1-202ENST00000455385 PRRC2BQ5JSZ5 2229 aaKnown RBP11.4□□□□□ -0.58
SYPL1-202ENST00000455385 COL4A4P53420 1690 aaPredicted RBP11.4□□□□□ -0.58
SYPL1-202ENST00000455385 REV3LO60673 3130 aa11.4□□□□□ -0.59
SYPL1-202ENST00000455385 TMEM265A0A087WTH1 108 aa11.4□□□□□ -0.59
SYPL1-202ENST00000455385 CLASP2O75122 1294 aaKnown RBP11.4□□□□□ -0.59
SYPL1-202ENST00000455385 BEST1O76090 585 aa11.4□□□□□ -0.59
SYPL1-202ENST00000455385 MICAL2O94851 1124 aa11.4□□□□□ -0.59
SYPL1-202ENST00000455385 SEC24AO95486 1093 aa11.4□□□□□ -0.59
SYPL1-202ENST00000455385 SERPING1P05155 500 aa11.4□□□□□ -0.59
SYPL1-202ENST00000455385 BDNFP23560 247 aa11.4□□□□□ -0.59
SYPL1-202ENST00000455385 CYP2F1P24903 491 aa11.4□□□□□ -0.59
SYPL1-202ENST00000455385 KLRC2P26717 231 aa11.4□□□□□ -0.59
SYPL1-202ENST00000455385 FMO1Q01740 532 aa11.4□□□□□ -0.59
SYPL1-202ENST00000455385 ADCY1Q08828 1119 aa11.4□□□□□ -0.59
SYPL1-202ENST00000455385 BMS1Q14692 1282 aaKnown RBP11.4□□□□□ -0.59
SYPL1-202ENST00000455385 PKDCCQ504Y2 493 aa11.4□□□□□ -0.59
SYPL1-202ENST00000455385 HABP4Q5JVS0 413 aaKnown RBP11.4□□□□□ -0.59
SYPL1-202ENST00000455385 DENND1BQ6P3S1 775 aa11.4□□□□□ -0.59
SYPL1-202ENST00000455385 WDTC1Q8N5D0 677 aa11.4□□□□□ -0.59
SYPL1-202ENST00000455385 UBA3Q8TBC4 463 aa11.4□□□□□ -0.59
SYPL1-202ENST00000455385 PANX2Q96RD6 677 aa11.4□□□□□ -0.59
SYPL1-202ENST00000455385 AGPAT1Q99943 283 aa11.4□□□□□ -0.59
SYPL1-202ENST00000455385 TSPAN16Q9UKR8 245 aa11.4□□□□□ -0.59
SYPL1-202ENST00000455385 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.4□□□□□ -0.59
SYPL1-202ENST00000455385 SLC27A5Q9Y2P5 690 aa11.4□□□□□ -0.59
SYPL1-202ENST00000455385 FAM170AA1A519 330 aa11.39□□□□□ -0.59
SYPL1-202ENST00000455385 TULP2O00295 520 aa11.39□□□□□ -0.59
SYPL1-202ENST00000455385 TGM5O43548 720 aa11.39□□□□□ -0.59
SYPL1-202ENST00000455385 ATF2P15336 505 aa11.39□□□□□ -0.59
SYPL1-202ENST00000455385 GTF2F1P35269 517 aaKnown RBP eCLIP11.39□□□□□ -0.59
SYPL1-202ENST00000455385 PDE6CP51160 858 aa11.39□□□□□ -0.59
SYPL1-202ENST00000455385 CDR2Q01850 454 aa11.39□□□□□ -0.59
SYPL1-202ENST00000455385 DUSP4Q13115 394 aa11.39□□□□□ -0.59
SYPL1-202ENST00000455385 MAPRE1Q15691 268 aaKnown RBP11.39□□□□□ -0.59
SYPL1-202ENST00000455385 NFE2Q16621 373 aaPredicted RBP11.39□□□□□ -0.59
SYPL1-202ENST00000455385 GOLGA7BQ2TAP0 167 aa11.39□□□□□ -0.59
SYPL1-202ENST00000455385 FAM35AQ86V20 835 aa11.39□□□□□ -0.59
SYPL1-202ENST00000455385 PPP1R9BQ96SB3 815 aa11.39□□□□□ -0.59
SYPL1-202ENST00000455385 KCNK16Q96T55 309 aa11.39□□□□□ -0.59
SYPL1-202ENST00000455385 EMILIN2Q9BXX0 1053 aa11.39□□□□□ -0.59
SYPL1-202ENST00000455385 ABI2Q9NYB9 513 aaPredicted RBP11.39□□□□□ -0.59
SYPL1-202ENST00000455385 PCDHGC3Q9UN70 934 aa11.39□□□□□ -0.59
SYPL1-202ENST00000455385 PTPRDP23468 1912 aa11.39□□□□□ -0.59
SYPL1-202ENST00000455385 PLXNA3P51805 1871 aa11.38□□□□□ -0.59
SYPL1-202ENST00000455385 SOAT2O75908 522 aa11.38□□□□□ -0.59
SYPL1-202ENST00000455385 ADH1AP07327 375 aa11.38□□□□□ -0.59
SYPL1-202ENST00000455385 CCDC172P0C7W6 258 aa11.38□□□□□ -0.59
SYPL1-202ENST00000455385 FECHP22830 423 aa11.38□□□□□ -0.59
SYPL1-202ENST00000455385 EIF4A3P38919 411 aaKnown RBP11.38□□□□□ -0.59
SYPL1-202ENST00000455385 CLCN4P51793 760 aa11.38□□□□□ -0.59
SYPL1-202ENST00000455385 RBM10P98175 930 aaKnown RBP11.38□□□□□ -0.59
SYPL1-202ENST00000455385 CREMQ03060 361 aa11.38□□□□□ -0.59
SYPL1-202ENST00000455385 TSR1Q2NL82 804 aaKnown RBP11.38□□□□□ -0.59
SYPL1-202ENST00000455385 CFAP221Q4G0U5 840 aa11.38□□□□□ -0.59
SYPL1-202ENST00000455385 ZNF697Q5TEC3 545 aa11.38□□□□□ -0.59
SYPL1-202ENST00000455385 TPGS2Q68CL5 300 aa11.38□□□□□ -0.59
SYPL1-202ENST00000455385 Q7L0L9 218 aa11.38□□□□□ -0.59
SYPL1-202ENST00000455385 SPATA2LQ8IUW3 424 aaPredicted RBP11.38□□□□□ -0.59
SYPL1-202ENST00000455385 TMEM139Q8IV31 216 aa11.38□□□□□ -0.59
SYPL1-202ENST00000455385 PASD1Q8IV76 773 aa11.38□□□□□ -0.59
SYPL1-202ENST00000455385 ANKRD52Q8NB46 1076 aa11.38□□□□□ -0.59
SYPL1-202ENST00000455385 ZMIZ2Q8NF64 920 aa11.38□□□□□ -0.59
SYPL1-202ENST00000455385 SLC22A17Q8WUG5 538 aa11.38□□□□□ -0.59
SYPL1-202ENST00000455385 SMOQ99835 787 aa11.38□□□□□ -0.59
SYPL1-202ENST00000455385 MED10Q9BTT4 135 aa11.38□□□□□ -0.59
SYPL1-202ENST00000455385 AFF4Q9UHB7 1163 aaKnown RBP11.38□□□□□ -0.59
SYPL1-202ENST00000455385 CYTH4Q9UIA0 394 aa11.38□□□□□ -0.59
SYPL1-202ENST00000455385 PCDHB5Q9Y5E4 795 aa11.38□□□□□ -0.59
SYPL1-202ENST00000455385 DDX3XO00571 662 aaKnown RBP eCLIP11.38□□□□□ -0.591e-24■■■■□ 24.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms