RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 RPL10AP62906 217 aaKnown RBP15.19■□□□□ 0.02
HMGXB4-204ENST00000455359 APBA1Q02410 837 aa15.19■□□□□ 0.02
HMGXB4-204ENST00000455359 ITIH3Q06033 890 aa15.19■□□□□ 0.02
HMGXB4-204ENST00000455359 RAPGEF1Q13905 1077 aa15.19■□□□□ 0.02
HMGXB4-204ENST00000455359 ARHGAP44Q17R89 818 aa15.19■□□□□ 0.02
HMGXB4-204ENST00000455359 SGO2Q562F6 1265 aa15.19■□□□□ 0.02
HMGXB4-204ENST00000455359 PPM1LQ5SGD2 360 aa15.19■□□□□ 0.02
HMGXB4-204ENST00000455359 LLGL2Q6P1M3 1020 aa15.19■□□□□ 0.02
HMGXB4-204ENST00000455359 CACNA2D4Q7Z3S7 1137 aa15.19■□□□□ 0.02
HMGXB4-204ENST00000455359 SLC7A14Q8TBB6 771 aa15.19■□□□□ 0.02
HMGXB4-204ENST00000455359 CYFIP2Q96F07 1278 aa15.19■□□□□ 0.02
HMGXB4-204ENST00000455359 PGLYRP2Q96PD5 576 aa15.19■□□□□ 0.02
HMGXB4-204ENST00000455359 SPAG5Q96R06 1193 aa15.19■□□□□ 0.02
HMGXB4-204ENST00000455359 B3GNT5Q9BYG0 378 aa15.19■□□□□ 0.02
HMGXB4-204ENST00000455359 TRIM5Q9C035 493 aa15.19■□□□□ 0.02
HMGXB4-204ENST00000455359 ABI2Q9NYB9 513 aaPredicted RBP15.19■□□□□ 0.02
HMGXB4-204ENST00000455359 ASB3Q9Y575 518 aa15.19■□□□□ 0.02
HMGXB4-204ENST00000455359 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.19■□□□□ 0.021e-7■■□□□ 14.2
HMGXB4-204ENST00000455359 INSL5Q9Y5Q6 135 aa15.19■□□□□ 0.02
HMGXB4-204ENST00000455359 VWA8A3KMH1 1905 aa15.19■□□□□ 0.02
HMGXB4-204ENST00000455359 A0A1W2PQJ5 194 aa15.18■□□□□ 0.02
HMGXB4-204ENST00000455359 FOXN3O00409 490 aaPredicted RBP15.18■□□□□ 0.02
HMGXB4-204ENST00000455359 TRIM66O15016 1216 aa15.18■□□□□ 0.02
HMGXB4-204ENST00000455359 MED7O43513 233 aa15.18■□□□□ 0.02
HMGXB4-204ENST00000455359 XYLBO75191 536 aa15.18■□□□□ 0.02
HMGXB4-204ENST00000455359 SEC24AO95486 1093 aa15.18■□□□□ 0.02
HMGXB4-204ENST00000455359 CCDC172P0C7W6 258 aa15.18■□□□□ 0.02
HMGXB4-204ENST00000455359 ALDH1A3P47895 512 aa15.18■□□□□ 0.02
HMGXB4-204ENST00000455359 EPHB3P54753 998 aa15.18■□□□□ 0.02
HMGXB4-204ENST00000455359 SLC8A3P57103 927 aa15.18■□□□□ 0.02
HMGXB4-204ENST00000455359 CYP27A1Q02318 531 aa15.18■□□□□ 0.02
HMGXB4-204ENST00000455359 PTK2Q05397 1052 aa15.18■□□□□ 0.02
HMGXB4-204ENST00000455359 TRIM14Q14142 442 aa15.18■□□□□ 0.02
HMGXB4-204ENST00000455359 CNGA2Q16280 664 aa15.18■□□□□ 0.02
HMGXB4-204ENST00000455359 MGAT5BQ3V5L5 792 aa15.18■□□□□ 0.02
HMGXB4-204ENST00000455359 ZNF394Q53GI3 561 aa15.18■□□□□ 0.02
HMGXB4-204ENST00000455359 SPECC1LQ69YQ0 1117 aa15.18■□□□□ 0.02
HMGXB4-204ENST00000455359 FUKQ8N0W3 1084 aa15.18■□□□□ 0.02
HMGXB4-204ENST00000455359 SLC2A14Q8TDB8 520 aa15.18■□□□□ 0.02
HMGXB4-204ENST00000455359 HLA-CQ95604 372 aa15.18■□□□□ 0.02
HMGXB4-204ENST00000455359 SMARCD1Q96GM5 515 aa15.18■□□□□ 0.02
HMGXB4-204ENST00000455359 C8orf48Q96LL4 319 aa15.18■□□□□ 0.02
HMGXB4-204ENST00000455359 PRKD2Q9BZL6 878 aa15.18■□□□□ 0.02
HMGXB4-204ENST00000455359 UBXN6Q9BZV1 441 aa15.18■□□□□ 0.02
HMGXB4-204ENST00000455359 GPR88Q9GZN0 384 aa15.18■□□□□ 0.02
HMGXB4-204ENST00000455359 NUCKS1Q9H1E3 243 aaKnown RBP15.18■□□□□ 0.02
HMGXB4-204ENST00000455359 EHD2Q9NZN4 543 aa15.18■□□□□ 0.02
HMGXB4-204ENST00000455359 CLEC1BQ9P126 229 aa15.18■□□□□ 0.02
HMGXB4-204ENST00000455359 YIPF1Q9Y548 306 aa15.18■□□□□ 0.02
HMGXB4-204ENST00000455359 SPDYE4A6NLX3 237 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 RNF225M0QZC1 329 aaPredicted RBP15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 O00370 1275 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 EPHB6O15197 1021 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 LINC01565O15544 149 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 LRG1P02750 347 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 SPATA31D3P0C874 917 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 FAM200BP0CF97 657 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 CD19P15391 556 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 SOX5P35711 763 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 LTBRP36941 435 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 USP8P40818 1118 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 PLCB2Q00722 1185 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 VEPH1Q14D04 833 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 SKIV2LQ15477 1246 aaKnown RBP15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 CCDC85BQ15834 202 aaPredicted RBP15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 SYCE2Q6PIF2 218 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 LCLAT1Q6UWP7 414 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 SPATA31D4Q6ZUB0 917 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 ITIH5Q86UX2 942 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 FAM35AQ86V20 835 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 VSTM4Q8IW00 320 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 C12orf29Q8N999 325 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 ANKRD52Q8NB46 1076 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 ZNF397Q8NF99 534 aaPredicted RBP15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 MRFAP1L1Q96HT8 127 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 SPATA17Q96L03 361 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 SEPT5Q99719 369 aaPredicted RBP15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 MED10Q9BTT4 135 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 TTYH3Q9C0H2 523 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 ADAM7Q9H2U9 754 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 UBE2ZQ9H832 354 aaPredicted RBP15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 PNPLA8Q9NP80 782 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 DMAP1Q9NPF5 467 aaPredicted RBP15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 AJAP1Q9UKB5 411 aaPredicted RBP15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 SLC27A5Q9Y2P5 690 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 TBX10O75333 385 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 BDNFP23560 247 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 CYP2F1P24903 491 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 GNA15P30679 374 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 ORC1Q13415 861 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 PUS10Q3MIT2 529 aaKnown RBP15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 CES5AQ6NT32 575 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 PAQR9Q6ZVX9 377 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 GPR149Q86SP6 731 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 ELMOD1Q8N336 334 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 LEMD2Q8NC56 503 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 BAP1Q92560 729 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 MSLNLQ96KJ4 702 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 NECTIN4Q96NY8 510 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 DUSP16Q9BY84 665 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms