RNA–Protein interactions for RNA: ENST00000454850.1

CLCN4-204, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 3

Gene CLCN4, Length 487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-204ENST00000454850 CYP2S1Q96SQ9 504 aa10.69□□□□□ -0.7
CLCN4-204ENST00000454850 NTPCRQ9BSD7 190 aaKnown RBP10.69□□□□□ -0.7
CLCN4-204ENST00000454850 MSTO1Q9BUK6 570 aa10.69□□□□□ -0.7
CLCN4-204ENST00000454850 TIPINQ9BVW5 301 aa10.69□□□□□ -0.7
CLCN4-204ENST00000454850 DSEQ9UL01 958 aa10.69□□□□□ -0.7
CLCN4-204ENST00000454850 GOLGA4Q13439 2230 aaKnown RBP10.68□□□□□ -0.7
CLCN4-204ENST00000454850 ATXN2Q99700 1313 aaKnown RBP10.68□□□□□ -0.7
CLCN4-204ENST00000454850 K7ENM7 598 aa10.68□□□□□ -0.7
CLCN4-204ENST00000454850 MAP3K13O43283 966 aa10.68□□□□□ -0.7
CLCN4-204ENST00000454850 FAM189A1O60320 539 aa10.68□□□□□ -0.7
CLCN4-204ENST00000454850 PRPF40AO75400 957 aaKnown RBP10.68□□□□□ -0.7
CLCN4-204ENST00000454850 TADA3O75528 432 aa10.68□□□□□ -0.7
CLCN4-204ENST00000454850 SIM1P81133 766 aaPredicted RBP10.68□□□□□ -0.7
CLCN4-204ENST00000454850 IL17AQ16552 155 aa10.68□□□□□ -0.7
CLCN4-204ENST00000454850 KYAT1Q16773 422 aa10.68□□□□□ -0.7
CLCN4-204ENST00000454850 DDR2Q16832 855 aa10.68□□□□□ -0.7
CLCN4-204ENST00000454850 CCDC83Q8IWF9 413 aa10.68□□□□□ -0.7
CLCN4-204ENST00000454850 DCP1BQ8IZD4 617 aaKnown RBP10.68□□□□□ -0.7
CLCN4-204ENST00000454850 MDGA1Q8NFP4 955 aa10.68□□□□□ -0.7
CLCN4-204ENST00000454850 C2orf15Q8WU43 125 aaKnown RBP10.68□□□□□ -0.7
CLCN4-204ENST00000454850 OSCP1Q8WVF1 389 aa10.68□□□□□ -0.7
CLCN4-204ENST00000454850 RLN3Q8WXF3 142 aa10.68□□□□□ -0.7
CLCN4-204ENST00000454850 SLC22A12Q96S37 553 aa10.68□□□□□ -0.7
CLCN4-204ENST00000454850 MMTAG2Q9BU76 263 aaKnown RBP10.68□□□□□ -0.7
CLCN4-204ENST00000454850 NUSAP1Q9BXS6 441 aaKnown RBP10.68□□□□□ -0.7
CLCN4-204ENST00000454850 SLC32A1Q9H598 525 aa10.68□□□□□ -0.7
CLCN4-204ENST00000454850 TMLHEQ9NVH6 421 aa10.68□□□□□ -0.7
CLCN4-204ENST00000454850 NEUROG3Q9Y4Z2 214 aa10.68□□□□□ -0.7
CLCN4-204ENST00000454850 PCDHB6Q9Y5E3 794 aa10.68□□□□□ -0.7
CLCN4-204ENST00000454850 PCDHB5Q9Y5E4 795 aa10.68□□□□□ -0.7
CLCN4-204ENST00000454850 PLXNB3Q9ULL4 1909 aa10.67□□□□□ -0.7
CLCN4-204ENST00000454850 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.67□□□□□ -0.7
CLCN4-204ENST00000454850 TRAV19A0A0A6YYK7 116 aa10.67□□□□□ -0.7
CLCN4-204ENST00000454850 ANO9A1A5B4 782 aa10.67□□□□□ -0.7
CLCN4-204ENST00000454850 PIRO00625 290 aa10.67□□□□□ -0.7
CLCN4-204ENST00000454850 USP17L7P0C7H9 530 aa10.67□□□□□ -0.7
CLCN4-204ENST00000454850 CSH1P0DML2 217 aa10.67□□□□□ -0.7
CLCN4-204ENST00000454850 CSH2P0DML3 217 aa10.67□□□□□ -0.7
CLCN4-204ENST00000454850 ENGP17813 658 aa10.67□□□□□ -0.7
CLCN4-204ENST00000454850 TRAPPC10P48553 1259 aa10.67□□□□□ -0.7
CLCN4-204ENST00000454850 ACOT2P49753 483 aa10.67□□□□□ -0.7
CLCN4-204ENST00000454850 TAF6P49848 677 aa10.67□□□□□ -0.7
CLCN4-204ENST00000454850 NEK4P51957 841 aa10.67□□□□□ -0.7
CLCN4-204ENST00000454850 NCKAP1LP55160 1127 aa10.67□□□□□ -0.7
CLCN4-204ENST00000454850 ANAPC15P60006 121 aa10.67□□□□□ -0.7
CLCN4-204ENST00000454850 TSPY1Q01534 308 aa10.67□□□□□ -0.7
CLCN4-204ENST00000454850 FAM160A1Q05DH4 1040 aa10.67□□□□□ -0.7
CLCN4-204ENST00000454850 LMAN2Q12907 356 aa10.67□□□□□ -0.7
CLCN4-204ENST00000454850 USP4Q13107 963 aa10.67□□□□□ -0.7
CLCN4-204ENST00000454850 ZNF268Q14587 947 aaPredicted RBP10.67□□□□□ -0.7
CLCN4-204ENST00000454850 ZNF77Q15935 545 aa10.67□□□□□ -0.7
CLCN4-204ENST00000454850 EML3Q32P44 896 aa10.67□□□□□ -0.7
CLCN4-204ENST00000454850 ZC2HC1CQ53FD0 456 aaPredicted RBP10.67□□□□□ -0.7
CLCN4-204ENST00000454850 RASSF3Q86WH2 238 aa10.67□□□□□ -0.7
CLCN4-204ENST00000454850 EFCAB13Q8IY85 973 aa10.67□□□□□ -0.7
CLCN4-204ENST00000454850 TMEFF1Q8IYR6 380 aa10.67□□□□□ -0.7
CLCN4-204ENST00000454850 ARL14EPQ8N8R7 260 aaPredicted RBP10.67□□□□□ -0.7
CLCN4-204ENST00000454850 SH3RF2Q8TEC5 729 aa10.67□□□□□ -0.7
CLCN4-204ENST00000454850 USP33Q8TEY7 942 aa10.67□□□□□ -0.7
CLCN4-204ENST00000454850 CNOT6LQ96LI5 555 aaKnown RBP10.67□□□□□ -0.7
CLCN4-204ENST00000454850 LINC00597Q9H2U6 94 aa10.67□□□□□ -0.7
CLCN4-204ENST00000454850 FSCN3Q9NQT6 498 aa10.67□□□□□ -0.7
CLCN4-204ENST00000454850 LARSQ9P2J5 1176 aaKnown RBP10.67□□□□□ -0.7
CLCN4-204ENST00000454850 KCNG1Q9UIX4 513 aa10.67□□□□□ -0.7
CLCN4-204ENST00000454850 MSRB2Q9Y3D2 182 aa10.67□□□□□ -0.7
CLCN4-204ENST00000454850 PTPRBP23467 1997 aa10.66□□□□□ -0.7
CLCN4-204ENST00000454850 PCDH15Q96QU1 1955 aa10.66□□□□□ -0.7
CLCN4-204ENST00000454850 A0A0B4J269 797 aa10.66□□□□□ -0.7
CLCN4-204ENST00000454850 H0YCG3 227 aa10.66□□□□□ -0.7
CLCN4-204ENST00000454850 SEC24BO95487 1268 aa10.66□□□□□ -0.7
CLCN4-204ENST00000454850 CFIP05156 583 aa10.66□□□□□ -0.7
CLCN4-204ENST00000454850 ADRB2P07550 413 aa10.66□□□□□ -0.7
CLCN4-204ENST00000454850 PLA2G4BP0C869 781 aa10.66□□□□□ -0.7
CLCN4-204ENST00000454850 PAX3P23760 479 aa10.66□□□□□ -0.7
CLCN4-204ENST00000454850 CYP2F1P24903 491 aa10.66□□□□□ -0.7
CLCN4-204ENST00000454850 PTGER3P43115 390 aa10.66□□□□□ -0.7
CLCN4-204ENST00000454850 TOB1P50616 345 aaPredicted RBP10.66□□□□□ -0.7
CLCN4-204ENST00000454850 SMARCB1Q12824 385 aa10.66□□□□□ -0.7
CLCN4-204ENST00000454850 NR1H3Q13133 447 aa10.66□□□□□ -0.7
CLCN4-204ENST00000454850 SLC39A4Q6P5W5 647 aa10.66□□□□□ -0.7
CLCN4-204ENST00000454850 C19orf48Q6RUI8 117 aa10.66□□□□□ -0.7
CLCN4-204ENST00000454850 TMEM92Q6UXU6 159 aa10.66□□□□□ -0.7
CLCN4-204ENST00000454850 DTHD1Q6ZMT9 781 aa10.66□□□□□ -0.7
CLCN4-204ENST00000454850 LPCAT2Q7L5N7 544 aa10.66□□□□□ -0.7
CLCN4-204ENST00000454850 CD302Q8IX05 232 aa10.66□□□□□ -0.7
CLCN4-204ENST00000454850 CHCHD4Q8N4Q1 142 aa10.66□□□□□ -0.7
CLCN4-204ENST00000454850 FRMD1Q8N878 549 aa10.66□□□□□ -0.7
CLCN4-204ENST00000454850 SYT2Q8N9I0 419 aaPredicted RBP10.66□□□□□ -0.7
CLCN4-204ENST00000454850 FBXO18Q8NFZ0 1043 aa10.66□□□□□ -0.7
CLCN4-204ENST00000454850 CDK5RAP3Q96JB5 506 aa10.66□□□□□ -0.7
CLCN4-204ENST00000454850 SPACA7Q96KW9 195 aa10.66□□□□□ -0.7
CLCN4-204ENST00000454850 PNMA5Q96PV4 448 aa10.66□□□□□ -0.7
CLCN4-204ENST00000454850 TSPAN18Q96SJ8 248 aa10.66□□□□□ -0.7
CLCN4-204ENST00000454850 GTPBP2Q9BX10 602 aaKnown RBP10.66□□□□□ -0.7
CLCN4-204ENST00000454850 ZHX3Q9H4I2 956 aa10.66□□□□□ -0.7
CLCN4-204ENST00000454850 TMEM206Q9H813 350 aa10.66□□□□□ -0.7
CLCN4-204ENST00000454850 TMEM74BQ9NUR3 256 aa10.66□□□□□ -0.7
CLCN4-204ENST00000454850 DPP3Q9NY33 737 aa10.66□□□□□ -0.7
CLCN4-204ENST00000454850 BCCIPQ9P287 314 aaKnown RBP eCLIP10.66□□□□□ -0.7
CLCN4-204ENST00000454850 UXTQ9UBK9 157 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms