RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 SPATA2LQ8IUW3 424 aaPredicted RBP15.11■□□□□ 0.01
HDAC4-205ENST00000454542 UBR7Q8N806 425 aa15.11■□□□□ 0.01
HDAC4-205ENST00000454542 LMO3Q8TAP4 145 aa15.11■□□□□ 0.01
HDAC4-205ENST00000454542 SHKBP1Q8TBC3 707 aa15.11■□□□□ 0.01
HDAC4-205ENST00000454542 CNOT6LQ96LI5 555 aaKnown RBP15.11■□□□□ 0.01
HDAC4-205ENST00000454542 CEP295NLQ96MC4 621 aa15.11■□□□□ 0.01
HDAC4-205ENST00000454542 GDE1Q9NZC3 331 aa15.11■□□□□ 0.01
HDAC4-205ENST00000454542 IGSF9Q9P2J2 1179 aa15.11■□□□□ 0.01
HDAC4-205ENST00000454542 MRPS23Q9Y3D9 190 aaKnown RBP15.11■□□□□ 0.01
HDAC4-205ENST00000454542 COL4A2P08572 1712 aa15.11■□□□□ 0.01
HDAC4-205ENST00000454542 ZNF197O14709 1029 aa15.1■□□□□ 0.01
HDAC4-205ENST00000454542 NOL4O94818 638 aa15.1■□□□□ 0.01
HDAC4-205ENST00000454542 ASGR2P07307 311 aa15.1■□□□□ 0.01
HDAC4-205ENST00000454542 CCDC192P0DO97 292 aa15.1■□□□□ 0.01
HDAC4-205ENST00000454542 ALADP13716 330 aa15.1■□□□□ 0.01
HDAC4-205ENST00000454542 NDST1P52848 882 aa15.1■□□□□ 0.01
HDAC4-205ENST00000454542 RPL10AP62906 217 aaKnown RBP15.1■□□□□ 0.01
HDAC4-205ENST00000454542 VEPH1Q14D04 833 aa15.1■□□□□ 0.01
HDAC4-205ENST00000454542 GAREM2Q75VX8 874 aa15.1■□□□□ 0.01
HDAC4-205ENST00000454542 CRYBG2Q8N1P7 616 aa15.1■□□□□ 0.01
HDAC4-205ENST00000454542 CCDC150Q8NCX0 1101 aa15.1■□□□□ 0.01
HDAC4-205ENST00000454542 WHAMMQ8TF30 809 aa15.1■□□□□ 0.01
HDAC4-205ENST00000454542 NXPE3Q969Y0 559 aa15.1■□□□□ 0.01
HDAC4-205ENST00000454542 TRMT2BQ96GJ1 504 aaKnown RBP15.1■□□□□ 0.01
HDAC4-205ENST00000454542 TNIP3Q96KP6 325 aa15.1■□□□□ 0.01
HDAC4-205ENST00000454542 TWNKQ96RR1 684 aa15.1■□□□□ 0.01
HDAC4-205ENST00000454542 ELOVL4Q9GZR5 314 aa15.1■□□□□ 0.01
HDAC4-205ENST00000454542 THAP9Q9H5L6 903 aa15.1■□□□□ 0.01
HDAC4-205ENST00000454542 EPHX3Q9H6B9 360 aa15.1■□□□□ 0.01
HDAC4-205ENST00000454542 C11orf16Q9NQ32 467 aa15.1■□□□□ 0.01
HDAC4-205ENST00000454542 TMEM30AQ9NV96 361 aa15.1■□□□□ 0.01
HDAC4-205ENST00000454542 TMEM63CQ9P1W3 806 aa15.1■□□□□ 0.01
HDAC4-205ENST00000454542 SORCS3Q9UPU3 1222 aa15.1■□□□□ 0.01
HDAC4-205ENST00000454542 TECTAO75443 2155 aa15.09■□□□□ 0.01
HDAC4-205ENST00000454542 TADA3O75528 432 aa15.09■□□□□ 0.01
HDAC4-205ENST00000454542 FGF19O95750 216 aa15.09■□□□□ 0.01
HDAC4-205ENST00000454542 AFPP02771 609 aaKnown RBP15.09■□□□□ 0.01
HDAC4-205ENST00000454542 FCARP24071 287 aa15.09■□□□□ 0.01
HDAC4-205ENST00000454542 CDR1P51861 262 aa15.09■□□□□ 0.01
HDAC4-205ENST00000454542 ZXDAP98168 799 aa15.09■□□□□ 0.01
HDAC4-205ENST00000454542 CYP4A22Q5TCH4 519 aa15.09■□□□□ 0.01
HDAC4-205ENST00000454542 PAQR9Q6ZVX9 377 aa15.09■□□□□ 0.01
HDAC4-205ENST00000454542 TMEM150AQ86TG1 271 aa15.09■□□□□ 0.01
HDAC4-205ENST00000454542 FAM35AQ86V20 835 aa15.09■□□□□ 0.01
HDAC4-205ENST00000454542 TTC39CQ8N584 583 aa15.09■□□□□ 0.01
HDAC4-205ENST00000454542 ING5Q8WYH8 240 aa15.09■□□□□ 0.01
HDAC4-205ENST00000454542 SPATA17Q96L03 361 aa15.09■□□□□ 0.01
HDAC4-205ENST00000454542 C8orf48Q96LL4 319 aa15.09■□□□□ 0.01
HDAC4-205ENST00000454542 MYRFLQ96LU7 910 aa15.09■□□□□ 0.01
HDAC4-205ENST00000454542 ARID3AQ99856 593 aa15.09■□□□□ 0.01
HDAC4-205ENST00000454542 B3GNT5Q9BYG0 378 aa15.09■□□□□ 0.01
HDAC4-205ENST00000454542 ZNF518BQ9C0D4 1074 aa15.09■□□□□ 0.01
HDAC4-205ENST00000454542 KCNK12Q9HB15 430 aa15.09■□□□□ 0.01
HDAC4-205ENST00000454542 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.09■□□□□ 0.012e-12■■■■■ 298.1
HDAC4-205ENST00000454542 MAGEC2Q9UBF1 373 aaPredicted RBP15.09■□□□□ 0.01
HDAC4-205ENST00000454542 LIMD1Q9UGP4 676 aa15.09■□□□□ 0.01
HDAC4-205ENST00000454542 DUSP12Q9UNI6 340 aa15.09■□□□□ 0.01
HDAC4-205ENST00000454542 TRIM66O15016 1216 aa15.08■□□□□ 0
HDAC4-205ENST00000454542 CLSTN1O94985 981 aa15.08■□□□□ 0
HDAC4-205ENST00000454542 CSH1P0DML2 217 aa15.08■□□□□ 0
HDAC4-205ENST00000454542 CSH2P0DML3 217 aa15.08■□□□□ 0
HDAC4-205ENST00000454542 MYL4P12829 197 aa15.08■□□□□ 0
HDAC4-205ENST00000454542 BDNFP23560 247 aa15.08■□□□□ 0
HDAC4-205ENST00000454542 CACNA2D1P54289 1103 aa15.08■□□□□ 0
HDAC4-205ENST00000454542 CYP27A1Q02318 531 aa15.08■□□□□ 0
HDAC4-205ENST00000454542 KCNH2Q12809 1159 aa15.08■□□□□ 0
HDAC4-205ENST00000454542 MTMR3Q13615 1198 aa15.08■□□□□ 0
HDAC4-205ENST00000454542 CUL2Q13617 745 aa15.08■□□□□ 0
HDAC4-205ENST00000454542 DDR2Q16832 855 aa15.08■□□□□ 0
HDAC4-205ENST00000454542 MTSS1LQ765P7 747 aa15.08■□□□□ 0
HDAC4-205ENST00000454542 UBALD2Q8IYN6 164 aa15.08■□□□□ 0
HDAC4-205ENST00000454542 FUKQ8N0W3 1084 aa15.08■□□□□ 0
HDAC4-205ENST00000454542 GIPC2Q8TF65 315 aa15.08■□□□□ 0
HDAC4-205ENST00000454542 EDAQ92838 391 aa15.08■□□□□ 0
HDAC4-205ENST00000454542 FGF14Q92915 247 aa15.08■□□□□ 0
HDAC4-205ENST00000454542 TATDN2Q93075 761 aa15.08■□□□□ 0
HDAC4-205ENST00000454542 TTLL2Q9BWV7 592 aa15.08■□□□□ 0
HDAC4-205ENST00000454542 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.08■□□□□ 0
HDAC4-205ENST00000454542 NUMBLQ9Y6R0 609 aa15.08■□□□□ 0
HDAC4-205ENST00000454542 TRIOO75962 3097 aa15.08■□□□□ 0
HDAC4-205ENST00000454542 ANAPC1Q9H1A4 1944 aa15.07■□□□□ 0
HDAC4-205ENST00000454542 ZNF638Q14966 1978 aaKnown RBP15.07■□□□□ 0
HDAC4-205ENST00000454542 A0A1W2PRU2 124 aa15.07■□□□□ 0
HDAC4-205ENST00000454542 SLC38A8A6NNN8 435 aa15.07■□□□□ 0
HDAC4-205ENST00000454542 CLDN5O00501 218 aa15.07■□□□□ 0
HDAC4-205ENST00000454542 GABRR2P28476 465 aa15.07■□□□□ 0
HDAC4-205ENST00000454542 WEE1P30291 646 aa15.07■□□□□ 0
HDAC4-205ENST00000454542 CDC25CP30307 473 aa15.07■□□□□ 0
HDAC4-205ENST00000454542 TEAD2Q15562 447 aa15.07■□□□□ 0
HDAC4-205ENST00000454542 STX1AQ16623 288 aa15.07■□□□□ 0
HDAC4-205ENST00000454542 WDR44Q5JSH3 913 aa15.07■□□□□ 0
HDAC4-205ENST00000454542 SDHAF4Q5VUM1 108 aa15.07■□□□□ 0
HDAC4-205ENST00000454542 PARM1Q6UWI2 310 aa15.07■□□□□ 0
HDAC4-205ENST00000454542 C11orf57Q6ZUT1 292 aaPredicted RBP15.07■□□□□ 0
HDAC4-205ENST00000454542 ACOT1Q86TX2 421 aa15.07■□□□□ 0
HDAC4-205ENST00000454542 STKLD1Q8NE28 680 aa15.07■□□□□ 0
HDAC4-205ENST00000454542 ENOX1Q8TC92 643 aaKnown RBP15.07■□□□□ 0
HDAC4-205ENST00000454542 ASB16Q96NS5 453 aa15.07■□□□□ 0
HDAC4-205ENST00000454542 NT5C1AQ9BXI3 368 aa15.07■□□□□ 0
HDAC4-205ENST00000454542 SMOC2Q9H3U7 446 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms