RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 PABPC1LQ4VXU2 614 aaKnown RBP21.28■■□□□ 1
COL9A3-202ENST00000452372 IQCEQ6IPM2 695 aa21.28■■□□□ 1
COL9A3-202ENST00000452372 SASS6Q6UVJ0 657 aa21.28■■□□□ 1
COL9A3-202ENST00000452372 FUBP3Q96I24 572 aaKnown RBP eCLIP21.28■■□□□ 1
COL9A3-202ENST00000452372 NIF3L1Q9GZT8 377 aa21.28■■□□□ 1
COL9A3-202ENST00000452372 CYP3A43Q9HB55 503 aa21.28■■□□□ 1
COL9A3-202ENST00000452372 AVENQ9NQS1 362 aaPredicted RBP21.28■■□□□ 1
COL9A3-202ENST00000452372 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.28■■□□□ 16e-8■■■■■ 41.8
COL9A3-202ENST00000452372 IGSF9Q9P2J2 1179 aa21.28■■□□□ 1
COL9A3-202ENST00000452372 DUSP12Q9UNI6 340 aa21.28■■□□□ 1
COL9A3-202ENST00000452372 PTPRZ1P23471 2315 aaPredicted RBP21.28■■□□□ 1
COL9A3-202ENST00000452372 P4HA2O15460 535 aa21.27■■□□□ 1
COL9A3-202ENST00000452372 GALR2O43603 387 aaPredicted RBP21.27■■□□□ 1
COL9A3-202ENST00000452372 NARSO43776 548 aaKnown RBP21.27■■□□□ 1
COL9A3-202ENST00000452372 RHOP08100 348 aa21.27■■□□□ 1
COL9A3-202ENST00000452372 PTPN1P18031 435 aaKnown RBP21.27■■□□□ 1
COL9A3-202ENST00000452372 CCDC142Q17RM4 750 aa21.27■■□□□ 1
COL9A3-202ENST00000452372 CFAP221Q4G0U5 840 aa21.27■■□□□ 1
COL9A3-202ENST00000452372 WDR44Q5JSH3 913 aa21.27■■□□□ 1
COL9A3-202ENST00000452372 ASTLQ6HA08 431 aaPredicted RBP21.27■■□□□ 1
COL9A3-202ENST00000452372 C4orf50Q6ZRC1 276 aa21.27■■□□□ 1
COL9A3-202ENST00000452372 IRF2BP1Q8IU81 584 aa21.27■■□□□ 1
COL9A3-202ENST00000452372 SPATA2LQ8IUW3 424 aaPredicted RBP21.27■■□□□ 1
COL9A3-202ENST00000452372 MYCBPAPQ8TBZ2 947 aa21.27■■□□□ 1
COL9A3-202ENST00000452372 CNOT6LQ96LI5 555 aaKnown RBP21.27■■□□□ 1
COL9A3-202ENST00000452372 SEPT5Q99719 369 aaPredicted RBP21.27■■□□□ 1
COL9A3-202ENST00000452372 CORO1BQ9BR76 489 aa21.27■■□□□ 1
COL9A3-202ENST00000452372 DNAJC25Q9H1X3 360 aa21.27■■□□□ 1
COL9A3-202ENST00000452372 FAM86C1Q9NVL1 165 aa21.27■■□□□ 1
COL9A3-202ENST00000452372 ASB3Q9Y575 518 aa21.27■■□□□ 1
COL9A3-202ENST00000452372 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.27■■□□□ 1
COL9A3-202ENST00000452372 VPS13AQ96RL7 3174 aa21.27■■□□□ 1
COL9A3-202ENST00000452372 H0Y858 1186 aa21.26■□□□□ 0.99
COL9A3-202ENST00000452372 PI15O43692 258 aa21.26■□□□□ 0.99
COL9A3-202ENST00000452372 SOAT2O75908 522 aa21.26■□□□□ 0.99
COL9A3-202ENST00000452372 PTMSP20962 102 aa21.26■□□□□ 0.99
COL9A3-202ENST00000452372 GBP2P32456 591 aaPredicted RBP21.26■□□□□ 0.99
COL9A3-202ENST00000452372 CLCN5P51795 746 aa21.26■□□□□ 0.99
COL9A3-202ENST00000452372 KCNH2Q12809 1159 aa21.26■□□□□ 0.99
COL9A3-202ENST00000452372 CWF19L1Q69YN2 538 aaKnown RBP21.26■□□□□ 0.99
COL9A3-202ENST00000452372 UNC93AQ86WB7 457 aa21.26■□□□□ 0.99
COL9A3-202ENST00000452372 SLC44A3Q8N4M1 653 aa21.26■□□□□ 0.99
COL9A3-202ENST00000452372 DPEP3Q9H4B8 488 aa21.26■□□□□ 0.99
COL9A3-202ENST00000452372 THAP9Q9H5L6 903 aa21.26■□□□□ 0.99
COL9A3-202ENST00000452372 ANO10Q9NW15 660 aa21.26■□□□□ 0.99
COL9A3-202ENST00000452372 MAGEC2Q9UBF1 373 aaPredicted RBP21.26■□□□□ 0.99
COL9A3-202ENST00000452372 LAMP2P13473 410 aa21.25■□□□□ 0.99
COL9A3-202ENST00000452372 ATF6P18850 670 aa21.25■□□□□ 0.99
COL9A3-202ENST00000452372 CYP2F1P24903 491 aa21.25■□□□□ 0.99
COL9A3-202ENST00000452372 EPHA5P54756 1037 aa21.25■□□□□ 0.99
COL9A3-202ENST00000452372 INCA1Q0VD86 236 aa21.25■□□□□ 0.99
COL9A3-202ENST00000452372 CETN1Q12798 172 aa21.25■□□□□ 0.99
COL9A3-202ENST00000452372 GET4Q7L5D6 327 aaPredicted RBP21.25■□□□□ 0.99
COL9A3-202ENST00000452372 DNAJB7Q7Z6W7 309 aaPredicted RBP21.25■□□□□ 0.99
COL9A3-202ENST00000452372 ITIH5Q86UX2 942 aa21.25■□□□□ 0.99
COL9A3-202ENST00000452372 LEMD2Q8NC56 503 aa21.25■□□□□ 0.99
COL9A3-202ENST00000452372 B3GALNT2Q8NCR0 500 aa21.25■□□□□ 0.99
COL9A3-202ENST00000452372 ITFG1Q8TB96 612 aa21.25■□□□□ 0.99
COL9A3-202ENST00000452372 TATDN2Q93075 761 aa21.25■□□□□ 0.99
COL9A3-202ENST00000452372 PSMG2Q969U7 264 aa21.25■□□□□ 0.99
COL9A3-202ENST00000452372 MYLPFQ96A32 169 aa21.25■□□□□ 0.99
COL9A3-202ENST00000452372 PCED1BQ96HM7 432 aa21.25■□□□□ 0.99
COL9A3-202ENST00000452372 TNIP3Q96KP6 325 aa21.25■□□□□ 0.99
COL9A3-202ENST00000452372 MRPS23Q9Y3D9 190 aaKnown RBP21.25■□□□□ 0.99
COL9A3-202ENST00000452372 WDR87Q6ZQQ6 2873 aa21.24■□□□□ 0.99
COL9A3-202ENST00000452372 ANHXE9PGG2 379 aa21.24■□□□□ 0.99
COL9A3-202ENST00000452372 ZNF197O14709 1029 aa21.24■□□□□ 0.99
COL9A3-202ENST00000452372 AFPP02771 609 aaKnown RBP21.24■□□□□ 0.99
COL9A3-202ENST00000452372 MAGEA11P43364 429 aa21.24■□□□□ 0.99
COL9A3-202ENST00000452372 NDST1P52848 882 aa21.24■□□□□ 0.99
COL9A3-202ENST00000452372 STX1AQ16623 288 aa21.24■□□□□ 0.99
COL9A3-202ENST00000452372 KLHL40Q2TBA0 621 aa21.24■□□□□ 0.99
COL9A3-202ENST00000452372 MDH1BQ5I0G3 518 aa21.24■□□□□ 0.99
COL9A3-202ENST00000452372 CYP4A22Q5TCH4 519 aa21.24■□□□□ 0.99
COL9A3-202ENST00000452372 CAVIN1Q6NZI2 390 aaKnown RBP21.24■□□□□ 0.99
COL9A3-202ENST00000452372 VSTM1Q6UX27 236 aa21.24■□□□□ 0.99
COL9A3-202ENST00000452372 CREBRFQ8IUR6 639 aa21.24■□□□□ 0.99
COL9A3-202ENST00000452372 FAM114A1Q8IWE2 563 aa21.24■□□□□ 0.99
COL9A3-202ENST00000452372 HS6ST3Q8IZP7 471 aa21.24■□□□□ 0.99
COL9A3-202ENST00000452372 CRYBG2Q8N1P7 616 aa21.24■□□□□ 0.99
COL9A3-202ENST00000452372 ENOX1Q8TC92 643 aaKnown RBP21.24■□□□□ 0.99
COL9A3-202ENST00000452372 LPIN3Q9BQK8 851 aa21.24■□□□□ 0.99
COL9A3-202ENST00000452372 LRRC3Q9BY71 257 aa21.24■□□□□ 0.99
COL9A3-202ENST00000452372 FAM124BQ9H5Z6 455 aaPredicted RBP21.24■□□□□ 0.99
COL9A3-202ENST00000452372 ASAH2Q9NR71 780 aa21.24■□□□□ 0.99
COL9A3-202ENST00000452372 ZFP37Q9Y6Q3 630 aaPredicted RBP21.24■□□□□ 0.99
COL9A3-202ENST00000452372 PTPRDP23468 1912 aa21.23■□□□□ 0.99
COL9A3-202ENST00000452372 MICAL2O94851 1124 aa21.23■□□□□ 0.99
COL9A3-202ENST00000452372 RPL10AP62906 217 aaKnown RBP21.23■□□□□ 0.99
COL9A3-202ENST00000452372 CYP27A1Q02318 531 aa21.23■□□□□ 0.99
COL9A3-202ENST00000452372 VEPH1Q14D04 833 aa21.23■□□□□ 0.99
COL9A3-202ENST00000452372 SLC5A9Q2M3M2 681 aa21.23■□□□□ 0.99
COL9A3-202ENST00000452372 PRSS36Q5K4E3 855 aa21.23■□□□□ 0.99
COL9A3-202ENST00000452372 PDZD4Q76G19 769 aaPredicted RBP21.23■□□□□ 0.99
COL9A3-202ENST00000452372 TTC39CQ8N584 583 aa21.23■□□□□ 0.99
COL9A3-202ENST00000452372 LMO3Q8TAP4 145 aa21.23■□□□□ 0.99
COL9A3-202ENST00000452372 FAM200AQ8TCP9 573 aa21.23■□□□□ 0.99
COL9A3-202ENST00000452372 FGF13Q92913 245 aa21.23■□□□□ 0.99
COL9A3-202ENST00000452372 CDH7Q9ULB5 785 aa21.23■□□□□ 0.99
COL9A3-202ENST00000452372 CFAP54Q96N23 3096 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms