RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 TFAP2BQ92481 460 aa11.89□□□□□ -0.51
SYVN1-204ENST00000449943 HSPH1Q92598 858 aa11.89□□□□□ -0.51
SYVN1-204ENST00000449943 SLC10A4Q96EP9 437 aa11.89□□□□□ -0.51
SYVN1-204ENST00000449943 PAFAH2Q99487 392 aa11.89□□□□□ -0.51
SYVN1-204ENST00000449943 PDGFDQ9GZP0 370 aaPredicted RBP11.89□□□□□ -0.51
SYVN1-204ENST00000449943 SPC25Q9HBM1 224 aa11.89□□□□□ -0.51
SYVN1-204ENST00000449943 PCDH9Q9HC56 1237 aa11.89□□□□□ -0.51
SYVN1-204ENST00000449943 SPON1Q9HCB6 807 aa11.89□□□□□ -0.51
SYVN1-204ENST00000449943 CLUHO75153 1309 aa11.88□□□□□ -0.51
SYVN1-204ENST00000449943 MAFGO15525 162 aa11.88□□□□□ -0.51
SYVN1-204ENST00000449943 KRT19P08727 400 aa11.88□□□□□ -0.51
SYVN1-204ENST00000449943 CD48P09326 243 aa11.88□□□□□ -0.51
SYVN1-204ENST00000449943 P4HA1P13674 534 aa11.88□□□□□ -0.51
SYVN1-204ENST00000449943 RFC1P35251 1148 aaPredicted RBP11.88□□□□□ -0.51
SYVN1-204ENST00000449943 YARSP54577 528 aaKnown RBP11.88□□□□□ -0.51
SYVN1-204ENST00000449943 TGFB2P61812 414 aa11.88□□□□□ -0.51
SYVN1-204ENST00000449943 MCL1Q07820 350 aa11.88□□□□□ -0.51
SYVN1-204ENST00000449943 CRYMQ14894 314 aa11.88□□□□□ -0.51
SYVN1-204ENST00000449943 NBPF12Q5TAG4 269 aaPredicted RBP11.88□□□□□ -0.51
SYVN1-204ENST00000449943 XRRA1Q6P2D8 792 aa11.88□□□□□ -0.51
SYVN1-204ENST00000449943 NLRP9Q7RTR0 991 aa11.88□□□□□ -0.51
SYVN1-204ENST00000449943 MTDHQ86UE4 582 aaKnown RBP11.88□□□□□ -0.51
SYVN1-204ENST00000449943 RFX6Q8HWS3 928 aa11.88□□□□□ -0.51
SYVN1-204ENST00000449943 MICAL1Q8TDZ2 1067 aa11.88□□□□□ -0.51
SYVN1-204ENST00000449943 TEPSINQ96N21 525 aa11.88□□□□□ -0.51
SYVN1-204ENST00000449943 ADPGKQ9BRR6 497 aa11.88□□□□□ -0.51
SYVN1-204ENST00000449943 SHOC2Q9UQ13 582 aa11.88□□□□□ -0.51
SYVN1-204ENST00000449943 CHMP2BQ9UQN3 213 aa11.88□□□□□ -0.51
SYVN1-204ENST00000449943 TCRBV7S3A2A0A539 114 aa11.88□□□□□ -0.51
SYVN1-204ENST00000449943 MARK3P27448 753 aa11.88□□□□□ -0.51
SYVN1-204ENST00000449943 PHBP35232 272 aa11.88□□□□□ -0.51
SYVN1-204ENST00000449943 ARL4CP56559 192 aa11.88□□□□□ -0.51
SYVN1-204ENST00000449943 TMEM132BQ14DG7 1078 aa11.88□□□□□ -0.51
SYVN1-204ENST00000449943 TMEM130Q8N3G9 435 aa11.88□□□□□ -0.51
SYVN1-204ENST00000449943 JOSD2Q8TAC2 188 aa11.88□□□□□ -0.51
SYVN1-204ENST00000449943 CYP39A1Q9NYL5 469 aa11.88□□□□□ -0.51
SYVN1-204ENST00000449943 SENP1Q9P0U3 644 aa11.88□□□□□ -0.51
SYVN1-204ENST00000449943 SLC17A7Q9P2U7 560 aa11.88□□□□□ -0.51
SYVN1-204ENST00000449943 SKIV2L2P42285 1042 aaKnown RBP11.88□□□□□ -0.51
SYVN1-204ENST00000449943 DENND1BQ6P3S1 775 aa11.88□□□□□ -0.51
SYVN1-204ENST00000449943 BZW1Q7L1Q6 419 aaKnown RBP11.88□□□□□ -0.51
SYVN1-204ENST00000449943 EEPD1Q7L9B9 569 aa11.88□□□□□ -0.51
SYVN1-204ENST00000449943 SAMD7Q7Z3H4 446 aa11.88□□□□□ -0.51
SYVN1-204ENST00000449943 TDRPQ86YL5 185 aa11.88□□□□□ -0.51
SYVN1-204ENST00000449943 FAM71DQ8N9W8 422 aa11.88□□□□□ -0.51
SYVN1-204ENST00000449943 TCP10LQ8TDR4 215 aa11.88□□□□□ -0.51
SYVN1-204ENST00000449943 C10orf82Q8WW14 230 aa11.88□□□□□ -0.51
SYVN1-204ENST00000449943 TBC1D10AQ9BXI6 508 aa11.88□□□□□ -0.51
SYVN1-204ENST00000449943 LRMDAQ9H2I8 198 aa11.88□□□□□ -0.51
SYVN1-204ENST00000449943 RAD23BP54727 409 aa11.87□□□□□ -0.51
SYVN1-204ENST00000449943 SESN3P58005 492 aa11.87□□□□□ -0.51
SYVN1-204ENST00000449943 CAPSQ13938 189 aa11.87□□□□□ -0.51
SYVN1-204ENST00000449943 PIGHQ14442 188 aaPredicted RBP11.87□□□□□ -0.51
SYVN1-204ENST00000449943 ZRSR2Q15696 482 aaKnown RBP11.87□□□□□ -0.51
SYVN1-204ENST00000449943 THNSL1Q8IYQ7 743 aa11.87□□□□□ -0.51
SYVN1-204ENST00000449943 ATP11CQ8NB49 1132 aa11.87□□□□□ -0.51
SYVN1-204ENST00000449943 FAM13CQ8NE31 585 aa11.87□□□□□ -0.51
SYVN1-204ENST00000449943 NUDCD1Q96RS6 583 aa11.87□□□□□ -0.51
SYVN1-204ENST00000449943 CALN1Q9BXU9 219 aa11.87□□□□□ -0.51
SYVN1-204ENST00000449943 DDX56Q9NY93 547 aaKnown RBP11.87□□□□□ -0.51
SYVN1-204ENST00000449943 RNF181Q9P0P0 153 aa11.87□□□□□ -0.51
SYVN1-204ENST00000449943 RABGEF1Q9UJ41 708 aa11.87□□□□□ -0.51
SYVN1-204ENST00000449943 STYXL1Q9Y6J8 313 aa11.87□□□□□ -0.51
SYVN1-204ENST00000449943 BRWD3Q6RI45 1802 aa11.87□□□□□ -0.51
SYVN1-204ENST00000449943 M0QZ92 97 aa11.87□□□□□ -0.51
SYVN1-204ENST00000449943 TYROBPO43914 113 aa11.87□□□□□ -0.51
SYVN1-204ENST00000449943 ITGAVP06756 1048 aa11.87□□□□□ -0.51
SYVN1-204ENST00000449943 KRT3P12035 628 aa11.87□□□□□ -0.51
SYVN1-204ENST00000449943 IL1R2P27930 398 aa11.87□□□□□ -0.51
SYVN1-204ENST00000449943 BACE1P56817 501 aa11.87□□□□□ -0.51
SYVN1-204ENST00000449943 MAP3K10Q02779 954 aa11.87□□□□□ -0.51
SYVN1-204ENST00000449943 R3HDM1Q15032 1099 aaKnown RBP11.87□□□□□ -0.51
SYVN1-204ENST00000449943 STXBP2Q15833 593 aa11.87□□□□□ -0.51
SYVN1-204ENST00000449943 ZNF699Q32M78 642 aa11.87□□□□□ -0.51
SYVN1-204ENST00000449943 PPIL6Q8IXY8 311 aa11.87□□□□□ -0.51
SYVN1-204ENST00000449943 AGGF1Q8N302 714 aaeCLIP11.87□□□□□ -0.51
SYVN1-204ENST00000449943 RFWD2Q8NHY2 731 aa11.87□□□□□ -0.51
SYVN1-204ENST00000449943 TTC8Q8TAM2 541 aa11.87□□□□□ -0.51
SYVN1-204ENST00000449943 CPT1BQ92523 772 aa11.87□□□□□ -0.51
SYVN1-204ENST00000449943 NIF3L1Q9GZT8 377 aa11.87□□□□□ -0.51
SYVN1-204ENST00000449943 SLC24A2Q9UI40 661 aa11.87□□□□□ -0.51
SYVN1-204ENST00000449943 XPO7Q9UIA9 1087 aaKnown RBP11.87□□□□□ -0.51
SYVN1-204ENST00000449943 POLIQ9UNA4 740 aa11.87□□□□□ -0.51
SYVN1-204ENST00000449943 DRG1Q9Y295 367 aaKnown RBP11.87□□□□□ -0.51
SYVN1-204ENST00000449943 PIK3R2O00459 728 aa11.87□□□□□ -0.51
SYVN1-204ENST00000449943 MAGEB2O15479 319 aa11.87□□□□□ -0.51
SYVN1-204ENST00000449943 ASS1P00966 412 aaKnown RBP11.87□□□□□ -0.51
SYVN1-204ENST00000449943 TROVE2P10155 538 aaKnown RBP eCLIP11.87□□□□□ -0.51
SYVN1-204ENST00000449943 RPL22P35268 128 aaKnown RBP11.87□□□□□ -0.51
SYVN1-204ENST00000449943 PSMC1P62191 440 aaKnown RBP11.87□□□□□ -0.51
SYVN1-204ENST00000449943 CNTN2Q02246 1040 aa11.87□□□□□ -0.51
SYVN1-204ENST00000449943 TAF5Q15542 800 aa11.87□□□□□ -0.51
SYVN1-204ENST00000449943 DEFB132Q7Z7B7 95 aa11.87□□□□□ -0.51
SYVN1-204ENST00000449943 WDTC1Q8N5D0 677 aa11.87□□□□□ -0.51
SYVN1-204ENST00000449943 TNNC2P02585 160 aa11.87□□□□□ -0.51
SYVN1-204ENST00000449943 DRICH1Q6PGQ1 229 aaPredicted RBP11.87□□□□□ -0.51
SYVN1-204ENST00000449943 UNC45BQ8IWX7 931 aa11.87□□□□□ -0.51
SYVN1-204ENST00000449943 KCTD6Q8NC69 237 aa11.87□□□□□ -0.51
SYVN1-204ENST00000449943 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.87□□□□□ -0.51
SYVN1-204ENST00000449943 TTC17Q96AE7 1141 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms