RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 ATF6P18850 670 aa13.66□□□□□ -0.22
AC004540.1-204ENST00000449537 FAM160A1Q05DH4 1040 aa13.66□□□□□ -0.22
AC004540.1-204ENST00000449537 EMC10Q5UCC4 262 aa13.66□□□□□ -0.22
AC004540.1-204ENST00000449537 SLC41A1Q8IVJ1 513 aa13.66□□□□□ -0.22
AC004540.1-204ENST00000449537 RHBDD1Q8TEB9 315 aa13.66□□□□□ -0.22
AC004540.1-204ENST00000449537 NAP1L4Q99733 375 aaKnown RBP13.66□□□□□ -0.22
AC004540.1-204ENST00000449537 CDT1Q9H211 546 aa13.66□□□□□ -0.22
AC004540.1-204ENST00000449537 PCDHA12Q9UN75 941 aa13.66□□□□□ -0.22
AC004540.1-204ENST00000449537 HELZP42694 1942 aaKnown RBP13.66□□□□□ -0.22
AC004540.1-204ENST00000449537 DENND4CQ5VZ89 1909 aa13.65□□□□□ -0.22
AC004540.1-204ENST00000449537 MYMKA6NI61 221 aa13.65□□□□□ -0.22
AC004540.1-204ENST00000449537 ERVH48-1M5A8F1 160 aa13.65□□□□□ -0.22
AC004540.1-204ENST00000449537 TYMPP19971 482 aa13.65□□□□□ -0.22
AC004540.1-204ENST00000449537 SCRN1Q12765 414 aa13.65□□□□□ -0.22
AC004540.1-204ENST00000449537 GRIK2Q13002 908 aa13.65□□□□□ -0.22
AC004540.1-204ENST00000449537 DMP1Q13316 513 aaPredicted RBP13.65□□□□□ -0.22
AC004540.1-204ENST00000449537 SMAD1Q15797 465 aaKnown RBP13.65□□□□□ -0.22
AC004540.1-204ENST00000449537 ADCK5Q3MIX3 580 aa13.65□□□□□ -0.22
AC004540.1-204ENST00000449537 ZNF568Q3ZCX4 644 aa13.65□□□□□ -0.22
AC004540.1-204ENST00000449537 SYCP2LQ5T4T6 812 aa13.65□□□□□ -0.22
AC004540.1-204ENST00000449537 POTEDQ86YR6 584 aa13.65□□□□□ -0.22
AC004540.1-204ENST00000449537 TRIM22Q8IYM9 498 aa13.65□□□□□ -0.22
AC004540.1-204ENST00000449537 HSPA12BQ96MM6 686 aa13.65□□□□□ -0.22
AC004540.1-204ENST00000449537 ARID3AQ99856 593 aa13.65□□□□□ -0.22
AC004540.1-204ENST00000449537 TCHPQ9BT92 498 aa13.65□□□□□ -0.22
AC004540.1-204ENST00000449537 KIFC3Q9BVG8 833 aa13.65□□□□□ -0.22
AC004540.1-204ENST00000449537 TTC12Q9H892 705 aaPredicted RBP13.65□□□□□ -0.22
AC004540.1-204ENST00000449537 ANO2Q9NQ90 1003 aa13.65□□□□□ -0.22
AC004540.1-204ENST00000449537 PLK4O00444 970 aa13.64□□□□□ -0.23
AC004540.1-204ENST00000449537 NFATC1O95644 943 aa13.64□□□□□ -0.23
AC004540.1-204ENST00000449537 HMGB1P09429 215 aaKnown RBP13.64□□□□□ -0.23
AC004540.1-204ENST00000449537 USP17L7P0C7H9 530 aa13.64□□□□□ -0.23
AC004540.1-204ENST00000449537 ZNF883P0CG24 379 aa13.64□□□□□ -0.23
AC004540.1-204ENST00000449537 AARSP49588 968 aaKnown RBP eCLIP13.64□□□□□ -0.23
AC004540.1-204ENST00000449537 CDR1P51861 262 aa13.64□□□□□ -0.23
AC004540.1-204ENST00000449537 SEMG2Q02383 582 aa13.64□□□□□ -0.23
AC004540.1-204ENST00000449537 NPY5RQ15761 445 aa13.64□□□□□ -0.23
AC004540.1-204ENST00000449537 ZNF77Q15935 545 aa13.64□□□□□ -0.23
AC004540.1-204ENST00000449537 SLC39A12Q504Y0 691 aa13.64□□□□□ -0.23
AC004540.1-204ENST00000449537 Q6ZUG5 572 aa13.64□□□□□ -0.23
AC004540.1-204ENST00000449537 BAHD1Q8TBE0 780 aaPredicted RBP13.64□□□□□ -0.23
AC004540.1-204ENST00000449537 BAP1Q92560 729 aa13.64□□□□□ -0.23
AC004540.1-204ENST00000449537 BRF1Q92994 677 aa13.64□□□□□ -0.23
AC004540.1-204ENST00000449537 NXPE2Q96DL1 559 aa13.64□□□□□ -0.23
AC004540.1-204ENST00000449537 WBP1Q96G27 269 aa13.64□□□□□ -0.23
AC004540.1-204ENST00000449537 ZNF419Q96HQ0 510 aaPredicted RBP13.64□□□□□ -0.23
AC004540.1-204ENST00000449537 IFT74Q96LB3 600 aa13.64□□□□□ -0.23
AC004540.1-204ENST00000449537 CYP2S1Q96SQ9 504 aa13.64□□□□□ -0.23
AC004540.1-204ENST00000449537 ACO2Q99798 780 aaKnown RBP13.64□□□□□ -0.23
AC004540.1-204ENST00000449537 PTPRHQ9HD43 1115 aa13.64□□□□□ -0.23
AC004540.1-204ENST00000449537 TUBGCP4Q9UGJ1 667 aa13.64□□□□□ -0.23
AC004540.1-204ENST00000449537 DNMT3LQ9UJW3 386 aa13.64□□□□□ -0.23
AC004540.1-204ENST00000449537 CITO14578 2027 aa13.63□□□□□ -0.23
AC004540.1-204ENST00000449537 ZBTB24O43167 697 aaPredicted RBP13.63□□□□□ -0.23
AC004540.1-204ENST00000449537 TLX3O43711 291 aaPredicted RBP13.63□□□□□ -0.23
AC004540.1-204ENST00000449537 ADAM23O75077 832 aa13.63□□□□□ -0.23
AC004540.1-204ENST00000449537 APODP05090 189 aa13.63□□□□□ -0.23
AC004540.1-204ENST00000449537 MCF2P10911 925 aa13.63□□□□□ -0.23
AC004540.1-204ENST00000449537 HAPLN1P10915 354 aaPredicted RBP13.63□□□□□ -0.23
AC004540.1-204ENST00000449537 HMGA1P17096 107 aaKnown RBP13.63□□□□□ -0.23
AC004540.1-204ENST00000449537 CYP11B2P19099 503 aa13.63□□□□□ -0.23
AC004540.1-204ENST00000449537 SSRP1Q08945 709 aaKnown RBP13.63□□□□□ -0.23
AC004540.1-204ENST00000449537 SLC10A6Q3KNW5 377 aa13.63□□□□□ -0.23
AC004540.1-204ENST00000449537 TSGA10IPQ3SY00 556 aa13.63□□□□□ -0.23
AC004540.1-204ENST00000449537 PADI6Q6TGC4 694 aa13.63□□□□□ -0.23
AC004540.1-204ENST00000449537 DBX2Q6ZNG2 339 aa13.63□□□□□ -0.23
AC004540.1-204ENST00000449537 SFTPA1Q8IWL2 248 aa13.63□□□□□ -0.23
AC004540.1-204ENST00000449537 FAM177A1Q8N128 213 aaPredicted RBP13.63□□□□□ -0.23
AC004540.1-204ENST00000449537 PNKPQ96T60 521 aa13.63□□□□□ -0.23
AC004540.1-204ENST00000449537 ESYT1Q9BSJ8 1104 aa13.63□□□□□ -0.23
AC004540.1-204ENST00000449537 GAREM1Q9H706 876 aa13.63□□□□□ -0.23
AC004540.1-204ENST00000449537 TMEM206Q9H813 350 aa13.63□□□□□ -0.23
AC004540.1-204ENST00000449537 TM7SF3Q9NS93 570 aa13.63□□□□□ -0.23
AC004540.1-204ENST00000449537 MAGED2Q9UNF1 606 aaPredicted RBP13.63□□□□□ -0.23
AC004540.1-204ENST00000449537 AK5Q9Y6K8 562 aa13.63□□□□□ -0.23
AC004540.1-204ENST00000449537 MYO18AQ92614 2054 aaKnown RBP13.63□□□□□ -0.23
AC004540.1-204ENST00000449537 NID2Q14112 1375 aa13.62□□□□□ -0.23
AC004540.1-204ENST00000449537 A0A0A0MRY4 1105 aa13.62□□□□□ -0.23
AC004540.1-204ENST00000449537 TRAV19A0A0A6YYK7 116 aa13.62□□□□□ -0.23
AC004540.1-204ENST00000449537 IGHV1OR15-9A0A0B4J2B8 117 aa13.62□□□□□ -0.23
AC004540.1-204ENST00000449537 FLRT2O43155 660 aa13.62□□□□□ -0.23
AC004540.1-204ENST00000449537 NDUFS2O75306 463 aa13.62□□□□□ -0.23
AC004540.1-204ENST00000449537 ZNF217O75362 1048 aa13.62□□□□□ -0.23
AC004540.1-204ENST00000449537 KAT7O95251 611 aa13.62□□□□□ -0.23
AC004540.1-204ENST00000449537 CKMP06732 381 aa13.62□□□□□ -0.23
AC004540.1-204ENST00000449537 GABRG2P18507 467 aa13.62□□□□□ -0.23
AC004540.1-204ENST00000449537 MAOBP27338 520 aa13.62□□□□□ -0.23
AC004540.1-204ENST00000449537 LRPAP1P30533 357 aa13.62□□□□□ -0.23
AC004540.1-204ENST00000449537 KIR2DL1P43626 348 aaPredicted RBP13.62□□□□□ -0.23
AC004540.1-204ENST00000449537 KRT32Q14532 448 aa13.62□□□□□ -0.23
AC004540.1-204ENST00000449537 PREPLQ4J6C6 727 aaPredicted RBP13.62□□□□□ -0.23
AC004540.1-204ENST00000449537 CCDC157Q569K6 752 aa13.62□□□□□ -0.23
AC004540.1-204ENST00000449537 WDR45BQ5MNZ6 344 aa13.62□□□□□ -0.23
AC004540.1-204ENST00000449537 TMPRSS12Q86WS5 348 aa13.62□□□□□ -0.23
AC004540.1-204ENST00000449537 RASEFQ8IZ41 740 aa13.62□□□□□ -0.23
AC004540.1-204ENST00000449537 SH3RF2Q8TEC5 729 aa13.62□□□□□ -0.23
AC004540.1-204ENST00000449537 C2orf15Q8WU43 125 aaKnown RBP13.62□□□□□ -0.23
AC004540.1-204ENST00000449537 FOXJ1Q92949 421 aa13.62□□□□□ -0.23
AC004540.1-204ENST00000449537 MRPL4Q9BYD3 311 aaKnown RBP13.62□□□□□ -0.23
AC004540.1-204ENST00000449537 IL21RQ9HBE5 538 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms